Xanthomonas campestris pv. vesicatoria str. 85-10

  1. XCV2779gumJYP_364510.1xanthan biosynthesis oligosaccharidyl-lipid flippase GumJ

gumJ XCV2779
XCV2778
XCV2778
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Sequence
Codon
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Narcisse
StringString database Remora
Multalin
XCV2780
XCV2780
ID gumJ
AC YP_364510.1
LT XCV2779
SY
OR NC_007508 from 3156992 to 3158503 on strand -
OS Xanthomonas campestris pv. vesicatoria str. 85-10
DE xanthan biosynthesis oligosaccharidyl-lipid flippase GumJ
IP Polysaccharide biosynthesis protein
CL
EC
GO Biological Process: polysaccharide biosynthetic process (GO:0000271)
Cellular Component: membrane (GO:0016020)
PM
AN
SQ 503 aa
 
........10........20........30........40........50
| | | | |
MTAETPTMTSSTPPPPPQRSLGSRAAGGAAVTMLGQSAKMVVQFGGIILL
ARLLTPYDYGLMAMVTAIVGAAEILRDFGLSAAAVQAKQVSREQRDNLFW
INSGIGLLLSLVVFASAHLIANFYKEPALVTISQALAVTFLINGMTTQYR
AHLSRGLRFGQVALSDVGSQVLGLGAAVAAALLGWGYWALVVQQVVQAGV
NFIIAASCARWLPGGYQRSAPMRDFMSFGWNLMAAQLLGYASRNVGQVII
GWRTGPDALGLYNRAFQLLMMPLNQINAPATSVALPVLSQLQDDRERFSA
FLLRGQTVMVHLIFALFAFACALAMPLIVLVLGEQWREAVPLFQVLTLGG
IFQTAAYATYWVFLARGLMRAQLVYSLVSRVLLIACIFIGSRWGAMGVAI
GYSFGLLLTWPLSLLWIGKISDAPVGALFTNALRAMVAYGVAGGCAYYAS
MTVGGPLWEQLAVGAVTMLAVCLLALAIWPAFRRDVIAIINIRKLLTQAK
ARR
pubmed

19

503

S=1865 I=77 E=0

GumJ

Pubmed 7565082

 

prodomImg

pubmed

18

420

S=1638 I=82 E=0

GumJ

Pubmed 10940020

 

prodomImg

pubmed

41

384

S=329 I=27 E=5.77195e-31

Teichuronic acid biosynthesis protein tuaB ; Cell membrane wall biogenesis/degradation Stress response Transmembrane

Pubmed 10048024

 

prodomImg

pubmed

41

384

S=320 I=27 E=6.51585e-30

Putative uncharacterized protein tuaB

Pubmed 17928718

 

prodomImg

pubmed

49

402

S=300 I=22 E=1.63914e-27

Lipopolysaccharide biosynthesis protein wzxC ; Cell inner membrane Transmembrane

Pubmed 8759852

 

prodomImg

pubmed

49

402

S=291 I=22 E=2.09062e-26

Flippase (Putative export protein)

Pubmed 11004393

 

prodomImg

pubmed

40

402

S=291 I=23 E=2.3212e-26

Uncharacterized membrane protein in cps region ; Cell Exopolysaccharide synthesis Transmembrane

Pubmed 7896702

 

prodomImg

pubmed

34

402

S=258 I=22 E=2.15759e-22

Wzx

Pubmed 15109730

 

prodomImg

pubmed

41

347

S=245 I=24 E=7.24321e-21

O-antigen repeat unit transporter Wzx

Pubmed 10531250

 

prodomImg

pubmed

34

367

S=244 I=22 E=1.08171e-20

O-antigen flippase

Pubmed 11598067

 

prodomImg

sp

41

384

S=329 I=27 E=3.63457e-31

Teichuronic acid biosynthesis protein tuaB - Bacillus subtilis

Pubmed 10048024,

 

prodomImg

sp

49

402

S=300 I=22 E=1.03216e-27

Lipopolysaccharide biosynthesis protein wzxC - Escherichia coli (strain K12)

Pubmed 8759852,

 

prodomImg

sp

40

402

S=291 I=23 E=1.46165e-26

Uncharacterized membrane protein in cps region - Klebsiella pneumoniae

Pubmed 7896702,

 

prodomImg

sp

32

348

S=136 I=21 E=8.16261e-08

Succinoglycan biosynthesis transport protein exoT - Rhizobium meliloti (Sinorhizobium meliloti)

Pubmed 8226645,8226646,8118055,11481431,

 

prodomImg

sp

80

384

S=131 I=20 E=2.88983e-07

Amylovoran biosynthesis protein amsL - Erwinia amylovora (Fire blight bacteria)

Pubmed 7596293,

 

prodomImg

trembl

1

503

S=2050 I=82 E=0

GumJ protein - Xanthomonas axonopodis pv. citri

 

prodomImg

trembl

18

503

S=1977 I=81 E=0

GumJ protein - Xanthomonas oryzae pv. oryzae

 

prodomImg

trembl

18

503

S=1976 I=81 E=0

GumJ protein - Xanthomonas oryzae pv. oryzae (strain MAFF 311018)

 

prodomImg

Iprscan IPR002797 [PF01943]

25

292

Polysaccharide biosynthesis protein

Iprscan [tmhmm]

170

192

-

Iprscan [tmhmm]

310

332

-

Iprscan [tmhmm]

342

364

-

Iprscan [tmhmm]

371

393

-

Iprscan [tmhmm]

398

420

-

Iprscan [tmhmm]

432

451

-

Iprscan [tmhmm]

461

483

-

Iprscan [tmhmm]

98

120

-

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pubmed

Set of Uniprot with relevant PubMed cross-references ncbi-blastp

19 hits
swiss-prot

Swiss-Prot ncbi-blastp

5 hits
trembl

TrEMBL ncbi-blastp

258 hits
xanc5

Xanthomonas campestris pv. vesicatoria str. 85-10 proteome ncbi-blastp

1 hits
hamap

HAMAP scan

0 hits
Interpro Scan

IprScan

9 hits