Xanthomonas campestris pv. campestris str. ATCC 33913

  1. XCC2622trxNP_637970.1thioredoxin

trx XCC2622
XCC2621
XCC2621 		Cluster
DrawMap 		Print Version

FASTA file 		Extract
Sequence 		Codon
Usage 		Narcisse
StringString database Remora
Multalin 		XCC2623
XCC2623
ID trx
AC NP_637970.1
LT XCC2622
SY
OR NC_003902 from 3109664 to 3110521 on strand +
OS Xanthomonas campestris pv. campestris str. ATCC 33913
DE thioredoxin
IP Thioredoxin; Thioredoxin-like fold; Thioredoxin family; ;
CL
EC
GO Biological Process: cell redox homeostasis (GO:0045454)
Biological Process: glycerol ether metabolic process (GO:0006662)
Molecular Function: electron carrier activity (GO:0009055)
Molecular Function: protein disulfide oxidoreductase activity (GO:0015035)
PM
AN
SQ 285 aa
  
........10........20........30........40........50
         |         |         |         |         |
MSDKAHVFDVTTDTFETEVLQKSLTTPVLVDFWATWCGPCKSLTPILEKL
AADYNGAFELAKVDVDKEQQIAAAFQIRSVPTVFLVKGGELVDGFPGAMP
EGQIREFLTQHGVLPAEPQVAEEVPLAPLDPQAQVAALREAIAAEPDKDE
LKLDLALALLKTGDTLEAEQLIDALPANLATDDRAVRAKARLGFANVLKD
APDAAALQTTVAADGSDLHARHLLGVRHLLDGDDEAALEQFLEMLRQNRG
FEDNLPRRSLIDAFRVIEDEDLVGRYRRKMSALLF

    






    

        
            
                xansp
            
                
        
NP_639122.1 lcl|trxA-XCC3777

        
1

	
108

	
S=240 I=45 E=1.11977e-22

	
thioredoxin

     	

   





    

        
            
                xansp
            
                
        
NP_636554.1 lcl|trx-XCC1180

        
27

	
111

	
S=170 I=42 E=3.19444e-14

	
thioredoxin

     	

   





    

        
            
                xansp
            
                
        
NP_635477.1 lcl|trxA-XCC0082

        
29

	
92

	
S=107 I=31 E=1.53891e-06

	
thioredoxin

     	

   





    

        
                pubmed
        
        

        
18

	
285

	
S=281 I=29 E=1.50904e-25

	
YcaC

	
Pubmed 11325940

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
8

	
111

	
S=266 I=45 E=9.57361e-24

	
Thioredoxin ; Electron transport Redox-active center

	
Pubmed 3294835

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
10

	
111

	
S=253 I=43 E=4.1026e-22

	
Thioredoxin-1 ; Electron transport Redox-active center

	
Pubmed 3096973,3926769

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
108

	
S=252 I=44 E=6.12687e-22

	
Thioredoxin-1 ; Electron transport Redox-active center

	
Pubmed 1561103,8253691

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
108

	
S=252 I=44 E=6.12687e-22

	
Thioredoxin-1 ; Electron transport Host-virus interaction Redox-active center

	
Pubmed 6098320,6099324

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
6

	
111

	
S=243 I=40 E=6.73795e-21

	
Thioredoxin ; Chloroplast Electron transport Plastid Redox-active center

	
Pubmed 8003693

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
10

	
111

	
S=238 I=41 E=2.91515e-20

	
Thioredoxin-1 ; Electron transport Redox-active center

	
Pubmed 2492995

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
10

	
108

	
S=238 I=41 E=2.9924e-20

	
Thioredoxin C-1 ; Electron transport Redox-active center

	
Pubmed 7021558

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
10

	
110

	
S=234 I=40 E=7.54031e-20

	
TrxA

	
Pubmed 15547262

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
108

	
S=234 I=44 E=9.29535e-20

	
Thioredoxin ; Electron transport Redox-active center

	
Pubmed 7496529

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
6

	
285

	
S=308 I=31 E=5.27173e-29

	
Uncharacterized protein ybbN - Escherichia coli (strain K12)

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
8

	
111

	
S=266 I=45 E=6.03565e-24

	
Thioredoxin - Chlorobium limicola f.sp. thiosulfatophilum

	
Pubmed 3294835,

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
111

	
S=256 I=43 E=1.11024e-22

	
Thioredoxin-2 - Chlorobium tepidum

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
10

	
111

	
S=253 I=43 E=2.58647e-22

	
Thioredoxin-1 - Anabaena sp. (strain PCC 7120)

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
10

	
111

	
S=253 I=43 E=2.58647e-22

	
Thioredoxin-1 - Anabaena sp. (strain PCC 7119)

	
Pubmed 3096973,3926769,

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR006662
	[PR00421]
	
28

	
36

	
	
Thioredoxin-like subdomain

    





    

        Iprscan
        IPR006662
	[PR00421]
	
36

	
45

	
	
Thioredoxin-like subdomain

    





    

        Iprscan
        IPR006662
	[PR00421]
	
76

	
87

	
	
Thioredoxin-like subdomain

    





    

        Iprscan
        IPR012335
	[G3DSA:3.40.30.10]
	
4

	
111

	
	
Thioredoxin fold

    





    

        Iprscan
        
	[PTHR10438:SF13]
	
16

	
110

	
	
-

    





    

        Iprscan
        IPR015467
	[PTHR10438]
	
16

	
110

	
	
Thioredoxin, core

    





    

        Iprscan
        IPR013766
	[PF00085]
	
6

	
111

	
	
Thioredoxin domain

    





    

        Iprscan
        IPR005746
	[TIGR01068]
	
10

	
112

	
	
Thioredoxin

    





    

        Iprscan
        IPR017937
	[PS00194]
	
29

	
47

	
	
Thioredoxin, conserved site

    





    

        Iprscan
        IPR017936
	[PS51352]
	
1

	
113

	
	
Thioredoxin-like

    





    

        Iprscan
        
	[seg]
	
144

	
161

	
	
-

    





    

        Iprscan
        IPR012336
	[SSF52833]
	
7

	
117

	
	
Thioredoxin-like fold

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            349 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            292 hits
        
    

    
    

        
            
                trembl
            
        
	    
            
TrEMBL ncbi-blastp

        		 	    
        
            0 hits
        
    

    
    

        
            
                xancp
            
        
    	
            
Xanthomonas campestris pv. campestris str. ATCC 33913 proteome ncbi-blastp

        		        
        
            4 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                12 hits