Ralstonia solanacearum sp.

  1. RSc2169prhMRSc2169LamB/YcsF family protein

prhM RSc2169
RSc2168
RSc2168 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Narcisse
StringString database Find Mutants

Find Clones 		Remora
Multalin 		RSc2170
RSc2170
ID prhM
AC NP_520290.1
LT RSc2169
SY RS01430
RX strain GMI1000
OR AL646052 from 2352050 to 2352793 on strand -
DE LamB/YcsF family protein
IP LamB/YcsF
CL VI.C Hypothetical/Global homology
EC
GO
PM
AN
SQ 247 aa
  
........10........20........30........40........50
         |         |         |         |         |
MTAIDLNADLGEGCDNDEALLALVSSANIACGWHAGDVNTMRQTTAWALR
QGVSIGAHPSFPDRENFGRTEMHLPPDEVYAGVLFQIGGLSAIVRAQGGR
LAHVKPHGALYNQAARDRPLAMAIARAVRDFDASLAVFGLAGGELVLAAR
ELGLAAKEEVFADRGYNADGTLVKRGTPGALLENEEAALSQTLAMVREQR
VQSVDGVWVPIRAQTVCLHGDGAHALAFARRIRDRLGSEGIAVRAGA

    





Show or not Domain decomposition
 

    

        
            
                ralso
            
                
        
NP_522497.1 lcl|RSp0936

        
4

	
240

	
S=426 I=40 E=3.66357e-45

	
hypothetical protein

     	

   





    

        
                pubmed
        
        

        
1

	
245

	
S=666 I=52 E=2.64141e-72

	
UPF0271 protein rni3

	
Pubmed 10722605

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
245

	
S=636 I=49 E=1.3571e-68

	
UPF0271 protein HI1729

	
Pubmed 10675023

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
245

	
S=610 I=50 E=1.83675e-65

	
UPF0271 protein ycsF

	
Pubmed 8969502

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
245

	
S=610 I=53 E=1.86906e-65

	
UPF0271 protein BP0150

	
Pubmed 9583950

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
6

	
124

	
S=267 I=44 E=7.54642e-24

	
Lactam utilization protein lamB

	
Pubmed 1729609

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
Q477G2|Y089_RALEJ

        
4

	
247

	
S=992 I=77 E=5.21806e-112

	
UPF0271 protein Reut_A0089 - Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus)

    





    

        
            
                sp_Pdown
            
        
        
Q0KFE3|Y126_RALEH

        
4

	
246

	
S=986 I=77 E=3.37149e-111

	
UPF0271 protein H16_A0126 - Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337))

    





    

        
            
                sp_Pdown
            
        
        
Q1LSC6|Y064_RALME

        
4

	
246

	
S=961 I=74 E=3.76667e-108

	
UPF0271 protein Rmet_0064 - Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)

    





    

        
            
                sp_Pdown
            
        
        
Q13T51|Y4200_BURXL

        
4

	
245

	
S=875 I=70 E=7.90625e-98

	
UPF0271 protein Bxeno_A4200 - Burkholderia xenovorans (strain LB400)

    





    

        
            
                sp_Pdown
            
        
        
A4JIL2|Y3124_BURVG

        
4

	
245

	
S=858 I=68 E=9.73019e-96

	
UPF0271 protein Bcep1808_3124 - Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia cepacia (strain R1808))

    





    

        
            
                trembl_Pdown
            
        
        
A7CME2|A7CME2_BURPI

        
1

	
247

	
S=1172 I=89 E=1.20211e-132

	
LamB/YcsF family protein - Ralstonia pickettii 12D

    





    

        
            
                trembl_Pdown
            
        
        
B2U8X6|B2U8X6_BURPI

        
1

	
247

	
S=1161 I=89 E=2.41268e-131

	
LamB/YcsF family protein - Ralstonia pickettii 12J

    





    

        
            
                trembl_Pdown
            
        
        
B2AG42|B2AG42_CUPTR

        
4

	
246

	
S=991 I=77 E=8.69833e-111

	
Putative lipoprotein, LamB/YcsF family protein - Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))

    





    

        Iprscan
        
	[PD011312]
	
68

	
117

	
	
-

    





    

        Iprscan
        IPR005501
	[PF03746]
	
3

	
239

	
	
LamB/YcsF

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            N/A hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            N/A hits
        
    

    
    

        
            
                trembl
            
        
	    
            
TrEMBL ncbi-blastp

        		 	    
        
            N/A hits
        
    

    
    

        
            
                trembl
            
        
    	
            
Ralstonia solanacearum str.GMI1000 proteome ncbi-blastp

        		        
        
            N/A hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            N/A hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                N/A hits