5 hits
RSc1721 | prhN | RSc1721 | Transcriptional Regulator PrhN |
RSc1880 | prhO | RSc1880 | transcription regulator protein PrhO |
RSc3149 | efpH | RSc3149 | Transcription regulator protein EfpH |
RSc3332 | crgA | RSc3332 | transcription regulator protein CrgA |
RSp0526 | RSp0526 | RSp0526 | TRANSCRIPTION REGULATOR, IscR family |
![]() RSc1720 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
Find Mutants
Find Clones |
![]() Multalin |
![]() RSc1722 |
ID | prhN |
AC | NP_519842.1 |
LT | RSc1721 |
SY | RS02911 |
RX | strain GMI1000 |
OR | AL646052 from 1841340 to 1841906 on strand + |
DE | Transcriptional Regulator PrhN |
IP | Uncharacterised conserved protein UCP036158, transcription regulator, MarR-type HTH region |
CL | VI.A Not classified regulator |
EC | |
GO | |
PM | |
AN | |
SQ | 188 aa |
........10........20........30........40........50 |
![]() |
1 |
188 |
S=801 I=81 E=6.515e-88 |
Putative transcriptional regulator - Ralstonia pickettii 12J |
![]() |
1 |
188 |
S=796 I=81 E=2.24698e-87 |
Putative transcriptional regulator - Ralstonia pickettii 12D |
![]() |
26 |
188 |
S=688 I=82 E=3.12289e-74 |
Putative uncharacterized protein - Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus) |
![]() |
IPR014601 [PIRSF036158] | 1 |
188 |
Uncharacterised conserved protein UCP036158, transcription regulator, MarR-type HTH region |
![]() |
[SSF46785] | 36 |
160 |
- |
Access unfiltered results
![]() RSc1879 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
Find Mutants
Find Clones |
![]() Multalin |
![]() RSc1881 |
ID | prhO |
AC | NP_520001.1 |
LT | RSc1880 |
SY | RS03440 |
RX | strain GMI1000 |
OR | AL646052 from 2063472 to 2064446 on strand + |
DE | transcription regulator protein PrhO |
IP | LysR, substrate-binding; Winged helix repressor DNA-binding |
CL | VI.A Not classified regulator |
EC | |
GO | DNA-dependent (GO:0006355) Molecular Function: transcription factor activity (GO:0003700) |
PM | |
AN | |
SQ | 324 aa |
........10........20........30........40........50 |
![]() |
NP_520618.1 lcl|RSc2497 |
1 |
292 |
S=183 I=23 E=1.30461e-15 |
transcription regulator protein |
![]() |
NP_519469.1 lcl|cysB1-RSc1348 |
1 |
238 |
S=165 I=27 E=1.99661e-13 |
transcriptional regulator CysB-like protein |
![]() |
NP_520548.1 lcl|cysB2-RSc2427 |
1 |
238 |
S=131 I=25 E=2.99783e-09 |
transcriptional regulator CysB-like protein |
![]() |
NP_522503.1 lcl|nac-RSp0942 |
1 |
88 |
S=122 I=33 E=2.96933e-08 |
nitrogen assimilation transcriptional regulator |
![]() |
NP_521451.1 lcl|RSc3332 |
2 |
85 |
S=122 I=35 E=3.1562e-08 |
transcription regulator protein |
![]() |
NP_520619.1 lcl|RSc2498 |
1 |
78 |
S=111 I=35 E=6.11752e-07 |
transcription regulator protein |
![]() |
NP_522384.1 lcl|RSp0823 |
140 |
285 |
S=110 I=30 E=8.52046e-07 |
transcription regulator protein |
![]() |
NP_521399.1 lcl|RSc3280 |
2 |
75 |
S=110 I=39 E=9.88174e-07 |
transcription regulator protein |
![]() |
NP_518925.1 lcl|RSc0804 |
1 |
67 |
S=110 I=41 E=1.04124e-06 |
transcription regulator protein |
![]() |
NP_522558.1 lcl|RSp0997 |
5 |
88 |
S=109 I=36 E=1.27245e-06 |
transcription regulator protein |
![]() |
1 |
274 |
S=283 I=30 E=1.20671e-25 |
Regulatory protein nocR ; Activator DNA-binding Plasmid Transcription regulation |
Pubmed 1799698 |
|
![]() |
1 |
274 |
S=283 I=30 E=1.28266e-25 |
Tiorf6 protein ; DNA-binding Plasmid Transcription regulation |
||
![]() |
1 |
274 |
S=278 I=29 E=4.58078e-25 |
Regulatory protein nocR ; Activator DNA-binding Plasmid Transcription regulation |
Pubmed 8232213 |
|
![]() |
4 |
285 |
S=273 I=30 E=1.80062e-24 |
Positive regulator for lys ; DNA-binding Transcription regulation |
Pubmed 12754231 |
|
![]() |
1 |
232 |
S=239 I=32 E=2.72723e-20 |
OccR ; DNA-binding Plasmid Transcription regulation |
Pubmed 16547030 |
|
![]() |
1 |
232 |
S=239 I=32 E=2.72723e-20 |
Octopine catabolism/uptake operon regulatory protein occR ; Activator DNA-binding Plasmid Transcription regulation |
Pubmed 1799699 |
|
![]() |
1 |
232 |
S=239 I=32 E=2.72723e-20 |
Octopine catabolism/uptake operon regulatory protein occR ; Activator DNA-binding Plasmid Transcription regulation |
Pubmed 1799698 |
|
![]() |
1 |
283 |
S=169 I=24 E=7.84828e-12 |
Uncharacterized HTH-type transcriptional regulator ywbI ; DNA-binding regulation |
Pubmed 7934828 |
|
![]() |
1 |
257 |
S=167 I=25 E=1.15181e-11 |
HTH-type transcriptional regulator alsR ; Acetoin biosynthesis DNA-binding regulation |
||
![]() |
1 |
238 |
S=163 I=28 E=3.45526e-11 |
Putative reguratory protein ; DNA-binding Transcription regulation |
Pubmed 15451113 |
|
![]() |
1 |
274 |
S=283 I=30 E=7.60262e-26 |
Regulatory protein nocR - Agrobacterium tumefaciens (strain C58 / ATCC 33970) |
![]() |
1 |
274 |
S=278 I=29 E=2.88601e-25 |
Regulatory protein nocR - Agrobacterium tumefaciens (strain T37) |
![]() |
1 |
260 |
S=264 I=31 E=1.62056e-23 |
Octopine catabolism/uptake operon regulatory protein occR - Rhizobium meliloti (Sinorhizobium meliloti) |
![]() |
1 |
232 |
S=239 I=32 E=1.71823e-20 |
Octopine catabolism/uptake operon regulatory protein occR - Agrobacterium tumefaciens |
![]() |
1 |
232 |
S=239 I=32 E=1.71823e-20 |
Octopine catabolism/uptake operon regulatory protein occR - Agrobacterium tumefaciens (strain Ach5) |
![]() |
1 |
324 |
S=1367 I=83 E=4.06998e-156 |
Transcriptional regulator, LysR family precursor - Ralstonia pickettii 12D |
![]() |
1 |
324 |
S=1346 I=82 E=1.32994e-153 |
Transcriptional regulator, LysR family precursor - Ralstonia pickettii 12J |
![]() |
1 |
320 |
S=930 I=59 E=3.05034e-103 |
Transcriptional regulator, LysR family - Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus) |
![]() |
IPR000847 [PR00039] | 18 |
29 |
Bacterial regulatory protein, LysR |
![]() |
IPR000847 [PR00039] | 29 |
39 |
Bacterial regulatory protein, LysR |
![]() |
IPR000847 [PR00039] | 39 |
50 |
Bacterial regulatory protein, LysR |
![]() |
IPR011991 [G3DSA:1.10.10.10] | 1 |
87 |
Winged helix repressor DNA-binding |
![]() |
[G3DSA:3.40.190.10] | 164 |
262 |
- |
![]() |
IPR000847 [PF00126] | 3 |
62 |
Bacterial regulatory protein, LysR |
![]() |
IPR005119 [PF03466] | 86 |
290 |
LysR, substrate-binding |
![]() |
IPR000847 [PS50931] | 1 |
58 |
Bacterial regulatory protein, LysR |
![]() |
[SSF46785] | 1 |
105 |
- |
![]() |
[SSF53850] | 86 |
318 |
- |
Access unfiltered results
![]() RSc3148 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
Find Mutants
Find Clones |
![]() Multalin |
![]() RSc3150 |
ID | efpH |
AC | NP_521270.1 |
LT | RSc3149 |
SY | RS00451 |
RX | strain GMI1000 |
OR | AL646052 from 3399263 to 3399604 on strand + |
DE | Transcription regulator protein EfpH |
IP | Lambda repressor-like, DNA-binding |
CL | VI.A Not classified regulator |
EC | |
GO | Molecular Function: DNA binding (GO:0003677) Molecular Function: sequence-specific DNA binding (GO:0043565) |
PM | |
AN | |
SQ | 113 aa |
........10........20........30........40........50 |
![]() |
NP_519218.1 lcl|RSc1097 |
1 |
113 |
S=424 I=79 E=1.78712e-45 |
transcription regulator protein |
![]() |
NP_521253.1 lcl|RSc3132 |
24 |
102 |
S=98 I=36 E=5.28059e-06 |
putative transcription regulator protein |
![]() |
20 |
83 |
S=120 I=41 E=7.25209e-07 |
Putative regulatory protein ; Plasmid |
Pubmed 15212790 |
|
![]() |
29 |
87 |
S=118 I=44 E=1.54842e-06 |
Regulatory protein munI ; DNA-binding Restriction system Transcription regulation |
Pubmed 8181741 |
|
![]() |
21 |
83 |
S=114 I=40 E=4.8945e-06 |
C.AhdI |
||
![]() |
18 |
83 |
S=113 I=38 E=5.52992e-06 |
Regulatory protein C.BcnI |
Pubmed 11917015 |
|
![]() |
24 |
77 |
S=108 I=44 E=2.19274e-05 |
BamHI control element ; DNA-binding Plasmid Restriction system Transcription regulation |
Pubmed 1901989 |
|
![]() |
19 |
88 |
S=104 I=34 E=7.49694e-05 |
BglII control element |
Pubmed 9073062 |
|
![]() |
29 |
87 |
S=118 I=44 E=1.0245e-06 |
Regulatory protein munI - Mycoplasma sp. |
![]() |
24 |
77 |
S=108 I=44 E=1.45081e-05 |
BamHI control element - Bacillus amyloliquefaciens |
![]() |
5 |
113 |
S=464 I=81 E=1.07419e-47 |
Probable transcription regulator protein - Burkholderia pseudomallei Pasteur 52237 |
![]() |
1 |
113 |
S=458 I=78 E=6.76133e-47 |
Possible transcriptional regulator, XRE family - Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) |
![]() |
23 |
113 |
S=430 I=89 E=1.71435e-43 |
Transcriptional regulator, XRE family - Burkholderia cenocepacia (strain HI2424) |
![]() |
[G3DSA:1.10.260.40] | 24 |
85 |
- |
![]() |
IPR001387 [PF01381] | 28 |
82 |
Helix-turn-helix type 3 |
![]() |
IPR001387 [SM00530] | 27 |
82 |
Helix-turn-helix type 3 |
![]() |
IPR001387 [PS50943] | 28 |
82 |
Helix-turn-helix type 3 |
![]() |
IPR010982 [SSF47413] | 23 |
89 |
Lambda repressor-like, DNA-binding |
Access unfiltered results
![]() RSc3331 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
Find Mutants
Find Clones |
![]() Multalin |
![]() RSc3333 |
ID | crgA |
AC | NP_521451.1 |
LT | RSc3332 |
SY | RS02566 |
RX | strain GMI1000 |
OR | AL646052 from 3594672 to 3595568 on strand + |
DE | transcription regulator protein CrgA |
IP | LysR, substrate-binding; Winged helix repressor DNA-binding |
CL | VI.A Not classified regulator |
EC | |
GO | DNA-dependent (GO:0006355) Molecular Function: transcription factor activity (GO:0003700) |
PM | |
AN | |
SQ | 298 aa |
........10........20........30........40........50 |
![]() |
NP_520448.1 lcl|RSc2327 |
1 |
284 |
S=598 I=42 E=5.56579e-66 |
transcription regulator protein |
![]() |
NP_522707.1 lcl|RSp1146 |
1 |
284 |
S=564 I=43 E=8.14109e-62 |
transcription regulator protein |
![]() |
NP_522471.1 lcl|RSp0910 |
1 |
294 |
S=451 I=36 E=4.29513e-48 |
transcription regulator protein |
![]() |
NP_521399.1 lcl|RSc3280 |
1 |
288 |
S=433 I=37 E=5.286e-46 |
transcription regulator protein |
![]() |
NP_522008.1 lcl|RSp0447 |
1 |
295 |
S=427 I=35 E=2.81927e-45 |
transcription regulator protein |
![]() |
NP_519481.1 lcl|RSc1360 |
1 |
279 |
S=427 I=38 E=3.38574e-45 |
transcription regulator protein |
![]() |
NP_519273.1 lcl|RSc1152 |
4 |
284 |
S=407 I=37 E=9.70722e-43 |
transcription regulator protein |
![]() |
NP_522671.1 lcl|RSp1110 |
1 |
285 |
S=403 I=33 E=2.71583e-42 |
transcription regulator protein |
![]() |
NP_518663.1 lcl|RSc0542 |
1 |
270 |
S=392 I=37 E=5.12808e-41 |
transcription regulator protein |
![]() |
NP_518186.1 lcl|RSc0065 |
1 |
291 |
S=392 I=33 E=5.54668e-41 |
transcription regulator protein |
![]() |
1 |
296 |
S=489 I=36 E=1.12177e-50 |
Transcriptional regulator |
Pubmed 18028413 |
|
![]() |
1 |
291 |
S=451 I=38 E=4.96529e-46 |
GstR ; DNA-binding Transcription regulation |
Pubmed 10419971 |
|
![]() |
4 |
292 |
S=433 I=34 E=7.27487e-44 |
Csw018 ; DNA-binding Transcription regulation |
Pubmed 14660379 |
|
![]() |
1 |
288 |
S=416 I=32 E=8.13438e-42 |
Uncharacterized HTH-type transcriptional regulator HI1364 ; DNA-binding regulation |
Pubmed 8635745 |
|
![]() |
1 |
284 |
S=405 I=34 E=1.73535e-40 |
Putative transcriptional regulator CeoR ; DNA-binding regulation |
Pubmed 14755343 |
|
![]() |
1 |
275 |
S=398 I=39 E=1.34653e-39 |
Putative LysR family transcriptional regulator |
Pubmed 18487337 |
|
![]() |
7 |
261 |
S=390 I=34 E=1.03576e-38 |
PltR ; DNA-binding Transcription regulation |
||
![]() |
1 |
290 |
S=386 I=32 E=3.39018e-38 |
Putative lysR-family transcriptional regulatory protein ; DNA-binding regulation |
Pubmed 16177365 |
|
![]() |
7 |
292 |
S=385 I=30 E=5.06293e-38 |
CrgA ; DNA-binding Transcription regulation |
Pubmed 10698947 |
|
![]() |
1 |
290 |
S=383 I=32 E=7.76142e-38 |
Putative lysR-family transcriptional regulator ; DNA-binding regulation |
Pubmed 16390445 |
|
![]() |
1 |
288 |
S=416 I=32 E=5.12487e-42 |
Uncharacterized HTH-type transcriptional regulator HI1364 - Haemophilus influenzae |
![]() |
10 |
292 |
S=380 I=32 E=1.11948e-37 |
Uncharacterized HTH-type transcriptional regulator yafC - Escherichia coli (strain K12) |
![]() |
1 |
278 |
S=374 I=33 E=5.28464e-37 |
HTH-type transcriptional activator aaeR - Escherichia coli (strain K12) |
![]() |
1 |
278 |
S=374 I=33 E=5.28464e-37 |
HTH-type transcriptional activator aaeR - Escherichia coli O6 |
![]() |
1 |
278 |
S=374 I=33 E=5.28464e-37 |
HTH-type transcriptional activator aaeR - Escherichia coli O157:H7 |
![]() |
1 |
295 |
S=1100 I=72 E=7.52081e-124 |
Regulatory protein, LysR - Burkholderia cenocepacia PC184 |
![]() |
1 |
295 |
S=1094 I=72 E=3.77371e-123 |
Transcriptional regulator, LysR family - Burkholderia cenocepacia (strain AU 1054) |
![]() |
1 |
295 |
S=1094 I=72 E=3.77371e-123 |
Transcriptional regulator, LysR family - Burkholderia cenocepacia (strain HI2424) |
![]() |
IPR011991 [G3DSA:1.10.10.10] | 2 |
88 |
Winged helix repressor DNA-binding |
![]() |
[G3DSA:3.40.190.10] | 91 |
170 |
- |
![]() |
IPR000847 [PF00126] | 4 |
63 |
Bacterial regulatory protein, LysR |
![]() |
IPR005119 [PF03466] | 87 |
293 |
LysR, substrate-binding |
![]() |
IPR000847 [PS50931] | 1 |
59 |
Bacterial regulatory protein, LysR |
![]() |
[SSF46785] | 1 |
106 |
- |
![]() |
[SSF53850] | 87 |
293 |
- |
Access unfiltered results
![]() RSp0525 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
Find Mutants
Find Clones |
![]() Multalin |
![]() RSp0527 |
ID | RSp0526 |
AC | NP_522087.1 |
LT | RSp0526 |
SY | RS00405 |
RX | strain GMI1000 |
OR | AL646053 from 656937 to 657368 on strand - |
DE | TRANSCRIPTION REGULATOR, IscR family |
IP | Transcriptional regulator, Rrf2 |
CL | VI.A Not classified regulator |
EC | |
GO | |
PM | |
AN | |
SQ | 143 aa |
........10........20........30........40........50 |
![]() |
NP_519139.1 lcl|RSc1018 |
1 |
85 |
S=91 I=32 E=5.93224e-05 |
hypothetical protein |
![]() |
4 |
135 |
S=273 I=42 E=4.07636e-25 |
Putative uncharacterized protein ywnA (YwnA protein) |
Pubmed 9150240 |
|
![]() |
1 |
135 |
S=228 I=42 E=1.17601e-19 |
Putative uncharacterized protein ; Plasmid |
||
![]() |
6 |
139 |
S=145 I=34 E=1.3884e-09 |
Transcriptional regulator ; Plasmid |
||
![]() |
26 |
124 |
S=142 I=34 E=3.62269e-09 |
Putative transcriptional regulator |
||
![]() |
26 |
139 |
S=123 I=29 E=5.99685e-07 |
Putative transcriptional regulator |
Pubmed 17449683 |
|
![]() |
1 |
134 |
S=122 I=27 E=8.95576e-07 |
Protein rrf2 ; DNA-binding |
Pubmed 8335628 |
|
![]() |
1 |
135 |
S=114 I=28 E=7.58222e-06 |
Similar to B.subtilis ywgB gene(27%-identity) (BH0656 protein) ; 2Fe-2S DNA-binding Iron Iron-sulfur Metal-binding |
Pubmed 10086842 |
|
![]() |
1 |
82 |
S=107 I=34 E=5.25292e-05 |
Putative uncharacterized protein ; 2Fe-2S DNA-binding Iron Iron-sulfur Metal-binding |
Pubmed 15262926 |
|
![]() |
1 |
134 |
S=122 I=27 E=5.88255e-07 |
Protein rrf2 - Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) |
![]() |
1 |
134 |
S=105 I=28 E=6.69326e-05 |
Putative HTH-type transcriptional regulator Mb1318 - Mycobacterium bovis |
![]() |
1 |
134 |
S=105 I=28 E=6.69326e-05 |
Putative HTH-type transcriptional regulator Rv1287/MT1325 - Mycobacterium tuberculosis |
![]() |
23 |
82 |
S=104 I=39 E=8.25114e-05 |
Putative HTH-type transcriptional regulator ywgB - Bacillus subtilis |
![]() |
1 |
142 |
S=512 I=75 E=3.19656e-53 |
Transcriptional regulator, BadM/Rrf2 family - Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus) |
![]() |
1 |
142 |
S=472 I=69 E=2.38734e-48 |
Transcriptional regulator, BadM/Rrf2 family precursor - Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) |
![]() |
IPR000944 [PF02082] | 1 |
123 |
Transcriptional regulator, Rrf2 |
![]() |
IPR000944 [PS51197] | 1 |
133 |
Transcriptional regulator, Rrf2 |
![]() |
[signalp] | 1 |
20 |
- |
![]() |
[SSF46785] | 5 |
133 |
- |
Access unfiltered results