Ralstonia solanacearum sp.

2 hits

  1. RSc2170prhLRSc2170Allophanate hydrolase subunit 2
  2. RSc2171prhKRSc2171Allophanate hydrolase subunit 1

prhL RSc2170
RSc2169
RSc2169 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Narcisse
StringString database Find Mutants

Find Clones 		Remora
Multalin 		RSc2171
RSc2171
ID prhL
AC NP_520291.1
LT RSc2170
SY RS01429
RX strain GMI1000
OR AL646052 from 2352813 to 2353874 on strand -
DE Allophanate hydrolase subunit 2
IP Allophanate hydrolase subunit 2
CL I.I Degradation
EC
GO
PM
AN
SQ 353 aa
  
........10........20........30........40........50
         |         |         |         |         |
MSRPTSRAAPALIEIVRAGVLTSVQDLGRTGYRRFGVCMSGALDPLSLYV
GNRLVGNRSDAAGIEFTLGHATLRFLADGLVALTGADCLATLDGAPVHAW
HAFPVQRGQTLTLRVAQGGVRAYLCVAGGIDVPEMMGSRATDLKAGFGGF
EGRPLRDGDRLAALPADRSHAPDVSGAAIGVKAPRWTFDRMRGELPVMRV
LPGPEYDDFLADSQAAFWESEWTLTPNSNRMGFRLQGPELVRRQLCSGDL
LSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGTVILADQWRLAQVPL
GTRIRFARATLEEAEAARADVSRYLQQIETALDWQRRGILSVARRTARTR
PMA

    





Show or not Domain decomposition
 

    

        
            
                ralso
            
                
        
NP_522499.1 lcl|RSp0938

        
12

	
304

	
S=624 I=50 E=4.68437e-69

	
hypothetical protein

     	

   





    

        
                pubmed
        
        

        
24

	
328

	
S=557 I=43 E=7.08288e-59

	
Putative uncharacterized protein rni2

	
Pubmed 10722605

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
13

	
300

	
S=450 I=38 E=6.76626e-46

	
Putative uncharacterized protein

	
Pubmed 9583950

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
12

	
335

	
S=446 I=34 E=2.25365e-45

	
Urea amidolyase

	
Pubmed 10430560,11210495

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
13

	
335

	
S=374 I=30 E=1.10386e-36

	
Allophanate hydrolase subunit 2

	
Pubmed 17636987

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
10

	
304

	
S=348 I=34 E=1.5071e-33

	
Urea amidolyase EC=6.3.4.6 EC=3.5.1.54 ; Arginine metabolism ATP-binding Biotin Hydrolase Ligase Multifunctional enzyme Nucleotide-binding Pho

	
Pubmed 1802034

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
13

	
334

	
S=323 I=29 E=2.02206e-30

	
KipI antagonist ; Sporulation

	
Pubmed 8574415,8969502

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
13

	
304

	
S=283 I=34 E=1.15251e-25

	
Urea carboxylase homologue

	
Pubmed 15090492

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
92

	
161

	
S=209 I=59 E=1.02131e-16

	
Amidolyase homolog

	
Pubmed 8855317

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
P75745|YBGK_ECOLI

        
12

	
328

	
S=697 I=49 E=5.87377e-76

	
Uncharacterized protein ybgK - Escherichia coli (strain K12)

    





    

        
            
                sp_Pdown
            
        
        
P44298|Y1730_HAEIN

        
12

	
333

	
S=568 I=43 E=2.08974e-60

	
Uncharacterized protein HI1730 - Haemophilus influenzae

    





    

        
            
                sp_Pdown
            
        
        
P32528|DUR1_YEAST

        
10

	
304

	
S=348 I=34 E=9.56918e-34

	
Urea amidolyase [Includes: Urea carboxylase - Saccharomyces cerevisiae (Baker's yeast)

    





    

        
            
                sp_Pdown
            
        
        
Q7WY77|KIPA_BACSU

        
13

	
334

	
S=323 I=29 E=1.28389e-30

	
KipI antagonist - Bacillus subtilis

    





    

        
            
                trembl_Pdown
            
        
        
B2U8X7|B2U8X7_BURPI

        
5

	
350

	
S=1472 I=81 E=8.89165e-169

	
Urea amidolyase related protein - Ralstonia pickettii 12J

    





    

        
            
                trembl_Pdown
            
        
        
A7CME3|A7CME3_BURPI

        
12

	
350

	
S=1463 I=82 E=9.36135e-168

	
Urea amidolyase related protein - Ralstonia pickettii 12D

    





    

        
            
                trembl_Pdown
            
        
        
Q477G3|Q477G3_RALEJ

        
12

	
353

	
S=1008 I=62 E=1.31219e-112

	
Allophanate hydrolase subunit 2 - Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus)

    





    

        Iprscan
        
	[PTHR18866]
	
8

	
137

	
	
-

    





    

        Iprscan
        
	[PTHR18866:SF14]
	
8

	
137

	
	
-

    





    

        Iprscan
        IPR003778
	[PF02626]
	
34

	
324

	
	
Allophanate hydrolase subunit 2

    





    

        Iprscan
        IPR003778
	[SM00797]
	
34

	
324

	
	
Allophanate hydrolase subunit 2

    





    

        Iprscan
        IPR003778
	[TIGR00724]
	
12

	
335

	
	
Allophanate hydrolase subunit 2

    





    

        Iprscan
        
	[signalp]
	
1

	
18

	
	
-

    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
  Validation code (copy this one 5wwRk7tS)  
 
     



Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            N/A hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            N/A hits
        
    

    
    

        
            
                trembl
            
        
	    
            
TrEMBL ncbi-blastp

        		 	    
        
            N/A hits
        
    

    
    

        
            
                trembl
            
        
    	
            
Ralstonia solanacearum str.GMI1000 proteome ncbi-blastp

        		        
        
            N/A hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            N/A hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                N/A hits
            
    








prhK RSc2171




    

         
             
            RSc2170
            
RSc2170
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        			
	
	
            Narcisse
            

        		
	
            
	    StringString database
            
        
	
            Find Mutants
        	


            Find Clones
    		
      	



        
    
             
            Remora
            
Multalin
            
    		

	
             
            RSc2172
            
RSc2172
            
        		

    





    

        ID
        prhK
    

    

        AC
        NP_520292.1
    

    

        LT
        RSc2171
    

    

        SY
        RS01428
    

    

        RX
        strain GMI1000
    

    

        OR
        AL646052 from 2353871 to 2354518 on strand -
    

   

        DE
        Allophanate hydrolase subunit 1
  

   

        IP
        Conserved hypothetical protein CHP00370
  

  

        CL
        I.I Degradation 
    

  

        EC
        
    

    
    

        GO
        
    

  
  

        PM
        
    

  

        AN
        
    

  


    

        SQ
        215 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MQCTIHRLGELALLCEVPPPATLTCQQRIWAMASRASEWAGVIDVVPGMN
NLTLVFGPQADAQALTALLREAWQESGALIADGKRIDIEVAYGGDDGPDL
RDVAAHTGLSPAEVVRRHTAPEYIVYFLGFLPGFAYMGGLDKSLATPRRA
EPRMAVPAGSVGIGGEQTGIYPAASPGGWQLLGRTDAALFLPQRDPPALL
APGDRIRFVASKVHA

    





Show or not Domain decomposition
 

    

        
            
                ralso
            
                
        
NP_522500.1 lcl|RSp0939

        
4

	
213

	
S=490 I=47 E=5.15884e-53

	
hypothetical protein

     	

   





    

        
                pubmed
        
        

        
1

	
213

	
S=523 I=48 E=4.49396e-55

	
Putative uncharacterized protein rni1

	
Pubmed 10722605

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
209

	
S=409 I=39 E=3.24517e-41

	
Kinase A inhibitor ; ATP-binding Nucleotide-binding Protein Sporulation

	
Pubmed 8574415,8969502

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
38

	
209

	
S=399 I=46 E=6.18124e-40

	
Putative uncharacterized protein PF1273

	
Pubmed 10430560,11210495

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
42

	
204

	
S=320 I=45 E=2.22954e-30

	
Putative uncharacterized protein

	
Pubmed 9583950

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
P0AAV4|YBGJ_ECOLI

        
6

	
212

	
S=566 I=53 E=1.90124e-60

	
Uncharacterized protein ybgJ - Escherichia coli (strain K12)

    





    

        
            
                sp_Pdown
            
        
        
P0AAV5|YBGJ_ECO57

        
6

	
212

	
S=566 I=53 E=1.90124e-60

	
Uncharacterized protein ybgJ - Escherichia coli O157:H7

    





    

        
            
                sp_Pdown
            
        
        
P44299|Y1731_HAEIN

        
8

	
214

	
S=489 I=45 E=4.02901e-51

	
Uncharacterized protein HI1731 - Haemophilus influenzae

    





    

        
            
                sp_Pdown
            
        
        
P60495|KIPI_BACSU

        
1

	
209

	
S=409 I=39 E=2.0777e-41

	
Kinase A inhibitor - Bacillus subtilis

    





    

        
            
                trembl_Pdown
            
        
        
B2U8X8|B2U8X8_BURPI

        
1

	
215

	
S=1022 I=90 E=1.12214e-114

	
Allophanate hydrolase subunit 1 - Ralstonia pickettii 12J

    





    

        
            
                trembl_Pdown
            
        
        
A7CME4|A7CME4_BURPI

        
1

	
215

	
S=1016 I=89 E=5.88145e-114

	
Allophanate hydrolase subunit 1 - Ralstonia pickettii 12D

    





    

        
            
                trembl_Pdown
            
        
        
Q477G4|Q477G4_RALEJ

        
2

	
215

	
S=769 I=68 E=5.63678e-84

	
Putative uncharacterized protein - Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus)

    





    

        Iprscan
        IPR003833
	[PF02682]
	
3

	
200

	
	
Allophanate hydrolase subunit 1

    





    

        Iprscan
        IPR003833
	[SM00796]
	
3

	
200

	
	
Allophanate hydrolase subunit 1

    





    

        Iprscan
        IPR010016
	[TIGR00370]
	
8

	
209

	
	
Conserved hypothetical protein CHP00370

    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
  Validation code (copy this one l0OMr4oh)  
 
     



Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            N/A hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            N/A hits
        
    

    
    

        
            
                trembl
            
        
	    
            
TrEMBL ncbi-blastp

        		 	    
        
            N/A hits
        
    

    
    

        
            
                trembl
            
        
    	
            
Ralstonia solanacearum str.GMI1000 proteome ncbi-blastp

        		        
        
            N/A hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            N/A hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                N/A hits