Ralstonia solanacearum sp.

4 hits

RSc1319 RSc1319 Bifunctional UDP-4-keto-pentose/UDP-xylose synthase
RSc1449 queE RSc1449 7-carboxy-7-deazaguanine synthase
RSc2170 prhL RSc2170 Allophanate hydrolase subunit 2
RSc2171 prhK RSc2171 Allophanate hydrolase subunit 1

RSc1319

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Multalin

RSc1320

ID
AC	NP_519440.1
LT	RSc1319
SY	RS02842
RX	strain GMI1000
OR	AL646052 from 1404147 to 1405202 on strand -
DE	Bifunctional UDP-4-keto-pentose/UDP-xylose synthase
IP	NAD-dependent epimerase/dehydratase;
CL	II.B.2 lipopolysaccharides
EC
GO	Biological Process: cellular metabolic process (GO:0044237) Biological Process: metabolic process (GO:0008152) Molecular Function: catalytic activity (GO:0003824) Molecular Function: binding (GO:0005488) Molecular Function: coenzyme binding (GO:0050662)
PM
AN
SQ	351 aa
	........10........20........30........40........50 \| \| \| \| \| MKKVLILGVNGFIGHHLSKRILESTDPEISQWEVYGMDMQTERLGDLVNH PRMHFFEGDITINKEWVEYHVRKCDVILPLVAIATPSTYVKAPLRVFELD FEANLPIVRSAAKYGKHLVFPSTSEVYGMCGDDEFDPEASPLVYGPINKP RWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIHTPKEGSSR VVTQFLGHIVRGENIQLVDGGQQKRAFTYVDDGIDALVRIIANKDGVASG KIYNIGNPSNNYSVRELAEMMLKKAGTIAEYKENAQKVKLVETTSGAYYG KGYQDVQNRVPKIANTMEELGWKPTTTMEDTLANIFEAYREHAAEARSLV D

Domain decomposition

Q93PD8 sp|Q93PD8|ARNA_YERPS

343

S=1001 I=55 E=1.14683e-112

Bifunctional polymyxin resistance protein arnA EC=2.1.2.n1 EC=1.1.1.n1 ; Antibiotic Lipid biosynthesis Lipopolysaccharide Methyltransferase Mult

Pubmed 15583148

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O52325 sp|O52325|ARNA_SALTY

339

S=982 I=55 E=2.57584e-110

Bifunctional polymyxin resistance protein arnA EC=2.1.2.n1 EC=1.1.1.n1 ; Antibiotic Lipid biosynthesis Lipopolysaccharide Methyltransferase Multi

Pubmed 9570402

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P77398 sp|P77398|ARNA_ECOLI

339

S=970 I=53 E=7.45608e-109

Bifunctional polymyxin resistance protein arnA EC=2.1.2.n1 EC=1.1.1.n1 ; Antibiotic Lipid biosynthesis Lipopolysaccharide Methyltransferase Multi

Pubmed 11706007

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Q6TNI9 sp|Q6TNI9|Q6TNI9_NICBE

346

S=556 I=36 E=1.0495e-58

UDP-D-apiose/UDP-D-xylose synthase

Pubmed 16549428

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Q9ZUY6 sp|Q9ZUY6|Q9ZUY6_ARATH

346

S=552 I=36 E=3.17591e-58

Putative dTDP-glucose 4-6-dehydratase (Putative uncharacterized protein) (UDP-D-apiose/UDP-D-xylose synthase) (At2g27860/F15K20.4)

Pubmed 12969423

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Q1EMR1 sp|Q1EMR1|Q1EMR1_PLAMJ

162

346

S=336 I=38 E=4.25357e-32

Nucleoside-diphopshate-sugar dehydratase

Pubmed 17041024

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B0BLM0 sp|B0BLM0|B0BLM0_9ACTO

342

S=294 I=29 E=5.50219e-27

Glucuronic acid decarboxylase

Pubmed 14528002,17918933

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Q0H2W2 sp|Q0H2W2|Q0H2W2_9ACTO

342

S=293 I=28 E=6.84223e-27

Putative UDP-glucose 4-epimerase

Pubmed 16873021

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Q9FIE8 sp|Q9FIE8|Q9FIE8_ARATH

340

S=283 I=29 E=1.26963e-25

DTDP-glucose 4-6-dehydratase (UDP-glucuronic acid decarboxylase)

Pubmed 10048488

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A9LH66 sp|A9LH66|A9LH66_9BACT

341

S=273 I=27 E=1.79794e-24

dTDP-glucose 4,6-dehydratase EC=4.2.1.46 ; Lyase

Pubmed 18043661

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A8GDR7|ARNA_SERP5

339

S=1016 I=54 E=1.13791e-114

Bifunctional polymyxin resistance protein arnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase - Serratia proteamaculans (strain 568)

Q7N3Q7|ARNA_PHOLL

345

S=1008 I=54 E=1.06036e-113

Bifunctional polymyxin resistance protein arnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase - Photorhabdus luminescens subsp. laumondii

A0KGY6|ARNA_AERHH

343

S=1007 I=55 E=1.36541e-113

Bifunctional polymyxin resistance protein arnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase - Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)

A1JPN5|ARNA_YERE8

339

S=1003 I=55 E=5.04939e-113

Bifunctional polymyxin resistance protein arnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase - Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081)

A4TIM4|ARNA_YERPP

343

S=1002 I=55 E=5.80528e-113

Bifunctional polymyxin resistance protein arnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase - Yersinia pestis (strain Pestoides F)

B2UAS2|B2UAS2_BURPI

351

S=1719 I=91 E=0

NAD-dependent epimerase/dehydratase - Ralstonia pickettii 12J

A7CD54|A7CD54_BURPI

351

S=1719 I=91 E=0

NAD-dependent epimerase/dehydratase - Ralstonia pickettii 12D

B1JTE2|B1JTE2_BURCC

351

S=1578 I=83 E=0

NAD-dependent epimerase/dehydratase - Burkholderia cenocepacia (strain MC0-3)

IPR016040 [G3DSA:3.40.50.720]

285

NAD(P)-binding

[PTHR10366]

347

[PTHR10366:SF35]

301

347

[PTHR10366:SF35]

285

[PTHR10366:SF35]

347

IPR001509 [PF01370]

256

NAD-dependent epimerase/dehydratase

IPR016040 [SSF51735]

348

NAD(P)-binding

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ID
DE
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CL
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	Set of Uniprot with relevant PubMed cross-references ncbi-blastp	N/A hits
	Swiss-Prot ncbi-blastp	N/A hits
	TrEMBL ncbi-blastp	N/A hits
	Ralstonia solanacearum str.GMI1000 proteome ncbi-blastp	N/A hits
	HAMAP scan	N/A hits
	IprScan	N/A hits

queE RSc1449

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Multalin

RSc1450

ID	queE
AC	NP_519570.1
LT	RSc1449
SY	RS03858
RX	strain GMI1000
OR	AL646052 from 1551351 to 1551989 on strand +
DE	7-carboxy-7-deazaguanine synthase
IP	Radical SAM
CL	I.D.2 purine ribonucleotide biosynthesis
EC	4.3.99.3
GO	Molecular Function: catalytic activity (GO:0003824) Molecular Function: iron-sulfur cluster binding (GO:0051536)
PM
AN
SQ	212 aa
	........10........20........30........40........50 \| \| \| \| \| MTYAVKEIFYTLQGEGANTGRAAVFCRFAGCNLWSGREADRAAAICQFCD TDFVGTDGTLGGKYPTADALADTVAAQWPAAATGGRPLVVCTGGEPLLQL DRPLIDALHARGFEIAIETNGTLAVPDGIDWVCVSPKMGAELVVTRGDEL KVVIPQPGQDLDAYERLDFRHFFLQPMDGPLARRNTALAVELCQRRPRWH LSLQTHKMLGIR

Domain decomposition

Q9WWW9 sp|Q9WWW9|Q9WWW9_PSEPU

125

S=147 I=36 E=1.87494e-09

Putative uncharacterized protein

Pubmed 8626299,8824639

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Q5DL44 sp|Q5DL44|Q5DL44_ACIBA

125

S=120 I=33 E=3.35425e-06

Putative organic radical activating enzyme

Pubmed 15793123

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P45097|Y1189_HAEIN

212

S=212 I=31 E=1.51687e-17

Uncharacterized protein HI1189 - Haemophilus influenzae

P64556|YGCF_SHIFL

211

S=178 I=34 E=2.14268e-13

Uncharacterized protein ygcF - Shigella flexneri

P64554|YGCF_ECOLI

211

S=178 I=34 E=2.14268e-13

Uncharacterized protein ygcF - Escherichia coli (strain K12)

P64555|YGCF_ECO57

211

S=178 I=34 E=2.14268e-13

Uncharacterized protein ygcF - Escherichia coli O157:H7

A7CJK7|A7CJK7_BURPI

212

S=1044 I=91 E=2.59543e-117

Putative uncharacterized protein - Ralstonia pickettii 12D

B2UBF1|B2UBF1_BURPI

212

S=1044 I=91 E=2.71107e-117

Putative uncharacterized protein - Ralstonia pickettii 12J

Q0KAE5|Q0KAE5_RALEH

212

S=943 I=83 E=5.07229e-105

Organic radical activating enzyme - Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337))

IPR007197 [PF04055]

123

Radical SAM

[SSF102114]

137

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ID
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	Set of Uniprot with relevant PubMed cross-references ncbi-blastp	N/A hits
	Swiss-Prot ncbi-blastp	N/A hits
	TrEMBL ncbi-blastp	N/A hits
	Ralstonia solanacearum str.GMI1000 proteome ncbi-blastp	N/A hits
	HAMAP scan	N/A hits
	IprScan	N/A hits

prhL RSc2170

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Multalin

RSc2171

ID	prhL
AC	NP_520291.1
LT	RSc2170
SY	RS01429
RX	strain GMI1000
OR	AL646052 from 2352813 to 2353874 on strand -
DE	Allophanate hydrolase subunit 2
IP	Allophanate hydrolase subunit 2
CL	I.I Degradation
EC	3.5.1.54
GO
PM
AN
SQ	353 aa
	........10........20........30........40........50 \| \| \| \| \| MSRPTSRAAPALIEIVRAGVLTSVQDLGRTGYRRFGVCMSGALDPLSLYV GNRLVGNRSDAAGIEFTLGHATLRFLADGLVALTGADCLATLDGAPVHAW HAFPVQRGQTLTLRVAQGGVRAYLCVAGGIDVPEMMGSRATDLKAGFGGF EGRPLRDGDRLAALPADRSHAPDVSGAAIGVKAPRWTFDRMRGELPVMRV LPGPEYDDFLADSQAAFWESEWTLTPNSNRMGFRLQGPELVRRQLCSGDL LSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGTVILADQWRLAQVPL GTRIRFARATLEEAEAARADVSRYLQQIETALDWQRRGILSVARRTARTR PMA

Domain decomposition

NP_522499.1 lcl|RSp0938

304

S=624 I=50 E=4.68437e-69

hypothetical protein

Q7AX06 sp|Q7AX06|Q7AX06_NEIME

328

S=557 I=43 E=7.08288e-59

Putative uncharacterized protein rni2

Pubmed 10722605

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O30443 sp|O30443|O30443_BORPE

300

S=450 I=38 E=6.76626e-46

Putative uncharacterized protein

Pubmed 9583950

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Q8U1D5 sp|Q8U1D5|Q8U1D5_PYRFU

335

S=446 I=34 E=2.25365e-45

Urea amidolyase

Pubmed 10430560,11210495

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A7KJH1 sp|A7KJH1|A7KJH1_STAXY

335

S=374 I=30 E=1.10386e-36

Allophanate hydrolase subunit 2

Pubmed 17636987

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P32528 sp|P32528|DUR1_YEAST

304

S=348 I=34 E=1.5071e-33

Urea amidolyase EC=6.3.4.6 EC=3.5.1.54 ; Arginine metabolism ATP-binding Biotin Hydrolase Ligase Multifunctional enzyme Nucleotide-binding Pho

Pubmed 1802034

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Q7WY77 sp|Q7WY77|KIPA_BACSU

334

S=323 I=29 E=2.02206e-30

KipI antagonist ; Sporulation

Pubmed 8574415,8969502

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Q75RY4 sp|Q75RY4|Q75RY4_9PROT

304

S=283 I=34 E=1.15251e-25

Urea carboxylase homologue

Pubmed 15090492

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P72093 sp|P72093|P72093_NEIME

161

S=209 I=59 E=1.02131e-16

Amidolyase homolog

Pubmed 8855317

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P75745|YBGK_ECOLI

328

S=697 I=49 E=5.87377e-76

Uncharacterized protein ybgK - Escherichia coli (strain K12)

P44298|Y1730_HAEIN

333

S=568 I=43 E=2.08974e-60

Uncharacterized protein HI1730 - Haemophilus influenzae

P32528|DUR1_YEAST

304

S=348 I=34 E=9.56918e-34

Urea amidolyase [Includes: Urea carboxylase - Saccharomyces cerevisiae (Baker's yeast)

Q7WY77|KIPA_BACSU

334

S=323 I=29 E=1.28389e-30

KipI antagonist - Bacillus subtilis

B2U8X7|B2U8X7_BURPI

350

S=1472 I=81 E=8.89165e-169

Urea amidolyase related protein - Ralstonia pickettii 12J

A7CME3|A7CME3_BURPI

350

S=1463 I=82 E=9.36135e-168

Urea amidolyase related protein - Ralstonia pickettii 12D

Q477G3|Q477G3_RALEJ

353

S=1008 I=62 E=1.31219e-112

Allophanate hydrolase subunit 2 - Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus)

[PTHR18866]

137

[PTHR18866:SF14]

137

IPR003778 [PF02626]

324

Allophanate hydrolase subunit 2

IPR003778 [SM00797]

324

Allophanate hydrolase subunit 2

IPR003778 [TIGR00724]

335

Allophanate hydrolase subunit 2

[signalp]

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	Set of Uniprot with relevant PubMed cross-references ncbi-blastp	N/A hits
	Swiss-Prot ncbi-blastp	N/A hits
	TrEMBL ncbi-blastp	N/A hits
	Ralstonia solanacearum str.GMI1000 proteome ncbi-blastp	N/A hits
	HAMAP scan	N/A hits
	IprScan	N/A hits

prhK RSc2171

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Multalin

RSc2172

ID	prhK
AC	NP_520292.1
LT	RSc2171
SY	RS01428
RX	strain GMI1000
OR	AL646052 from 2353871 to 2354518 on strand -
DE	Allophanate hydrolase subunit 1
IP	Conserved hypothetical protein CHP00370
CL	I.I Degradation
EC	3.5.1.54
GO
PM
AN
SQ	215 aa
	........10........20........30........40........50 \| \| \| \| \| MQCTIHRLGELALLCEVPPPATLTCQQRIWAMASRASEWAGVIDVVPGMN NLTLVFGPQADAQALTALLREAWQESGALIADGKRIDIEVAYGGDDGPDL RDVAAHTGLSPAEVVRRHTAPEYIVYFLGFLPGFAYMGGLDKSLATPRRA EPRMAVPAGSVGIGGEQTGIYPAASPGGWQLLGRTDAALFLPQRDPPALL APGDRIRFVASKVHA

Domain decomposition

NP_522500.1 lcl|RSp0939

213

S=490 I=47 E=5.15884e-53

hypothetical protein

Q7AX07 sp|Q7AX07|Q7AX07_NEIME

213

S=523 I=48 E=4.49396e-55

Putative uncharacterized protein rni1

Pubmed 10722605

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P60495 sp|P60495|KIPI_BACSU

209

S=409 I=39 E=3.24517e-41

Kinase A inhibitor ; ATP-binding Nucleotide-binding Protein Sporulation

Pubmed 8574415,8969502

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Q8U1D6 sp|Q8U1D6|Q8U1D6_PYRFU

209

S=399 I=46 E=6.18124e-40

Putative uncharacterized protein PF1273

Pubmed 10430560,11210495

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O30443 sp|O30443|O30443_BORPE

204

S=320 I=45 E=2.22954e-30

Putative uncharacterized protein

Pubmed 9583950

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P0AAV4|YBGJ_ECOLI

212

S=566 I=53 E=1.90124e-60

Uncharacterized protein ybgJ - Escherichia coli (strain K12)

P0AAV5|YBGJ_ECO57

212

S=566 I=53 E=1.90124e-60

Uncharacterized protein ybgJ - Escherichia coli O157:H7

P44299|Y1731_HAEIN

214

S=489 I=45 E=4.02901e-51

Uncharacterized protein HI1731 - Haemophilus influenzae

P60495|KIPI_BACSU

209

S=409 I=39 E=2.0777e-41

Kinase A inhibitor - Bacillus subtilis

B2U8X8|B2U8X8_BURPI

215

S=1022 I=90 E=1.12214e-114

Allophanate hydrolase subunit 1 - Ralstonia pickettii 12J

A7CME4|A7CME4_BURPI

215

S=1016 I=89 E=5.88145e-114

Allophanate hydrolase subunit 1 - Ralstonia pickettii 12D

Q477G4|Q477G4_RALEJ

215

S=769 I=68 E=5.63678e-84

Putative uncharacterized protein - Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus)

IPR003833 [PF02682]

200

Allophanate hydrolase subunit 1

IPR003833 [SM00796]

200

Allophanate hydrolase subunit 1

IPR010016 [TIGR00370]

209

Conserved hypothetical protein CHP00370

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Access unfiltered results

	Set of Uniprot with relevant PubMed cross-references ncbi-blastp	N/A hits
	Swiss-Prot ncbi-blastp	N/A hits
	TrEMBL ncbi-blastp	N/A hits
	Ralstonia solanacearum str.GMI1000 proteome ncbi-blastp	N/A hits
	HAMAP scan	N/A hits
	IprScan	N/A hits

RSc1319

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queE RSc1449

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prhL RSc2170

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prhK RSc2171

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