4 hits
RSc1319 | RSc1319 | Bifunctional UDP-4-keto-pentose/UDP-xylose synthase |
RSc1449 | queE | RSc1449 | 7-carboxy-7-deazaguanine synthase |
RSc2170 | prhL | RSc2170 | Allophanate hydrolase subunit 2 |
RSc2171 | prhK | RSc2171 | Allophanate hydrolase subunit 1 |
![]() RSc1318 |
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Codon Usage |
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![]() Multalin |
![]() RSc1320 |
ID | |
AC | NP_519440.1 |
LT | RSc1319 |
SY | RS02842 |
RX | strain GMI1000 |
OR | AL646052 from 1404147 to 1405202 on strand - |
DE | Bifunctional UDP-4-keto-pentose/UDP-xylose synthase |
IP | NAD-dependent epimerase/dehydratase; |
CL | II.B.2 lipopolysaccharides |
EC | |
GO | Biological Process: cellular metabolic process (GO:0044237) Biological Process: metabolic process (GO:0008152) Molecular Function: coenzyme binding (GO:0050662) Molecular Function: binding (GO:0005488) Molecular Function: catalytic activity (GO:0003824) |
PM | |
AN | |
SQ | 351 aa |
........10........20........30........40........50 |
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3 |
343 |
S=1001 I=55 E=1.14683e-112 |
Bifunctional polymyxin resistance protein arnA EC=2.1.2.n1 EC=1.1.1.n1 ; Antibiotic Lipid biosynthesis Lipopolysaccharide Methyltransferase Mult |
Pubmed 15583148 |
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3 |
339 |
S=982 I=55 E=2.57584e-110 |
Bifunctional polymyxin resistance protein arnA EC=2.1.2.n1 EC=1.1.1.n1 ; Antibiotic Lipid biosynthesis Lipopolysaccharide Methyltransferase Multi |
Pubmed 9570402 |
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3 |
339 |
S=970 I=53 E=7.45608e-109 |
Bifunctional polymyxin resistance protein arnA EC=2.1.2.n1 EC=1.1.1.n1 ; Antibiotic Lipid biosynthesis Lipopolysaccharide Methyltransferase Multi |
Pubmed 11706007 |
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3 |
346 |
S=556 I=36 E=1.0495e-58 |
UDP-D-apiose/UDP-D-xylose synthase |
Pubmed 16549428 |
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4 |
346 |
S=552 I=36 E=3.17591e-58 |
Putative dTDP-glucose 4-6-dehydratase (Putative uncharacterized protein) (UDP-D-apiose/UDP-D-xylose synthase) (At2g27860/F15K20.4) |
Pubmed 12969423 |
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162 |
346 |
S=336 I=38 E=4.25357e-32 |
Nucleoside-diphopshate-sugar dehydratase |
Pubmed 17041024 |
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1 |
342 |
S=294 I=29 E=5.50219e-27 |
Glucuronic acid decarboxylase |
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3 |
342 |
S=293 I=28 E=6.84223e-27 |
Putative UDP-glucose 4-epimerase |
Pubmed 16873021 |
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3 |
340 |
S=283 I=29 E=1.26963e-25 |
DTDP-glucose 4-6-dehydratase (UDP-glucuronic acid decarboxylase) |
Pubmed 10048488 |
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1 |
341 |
S=273 I=27 E=1.79794e-24 |
dTDP-glucose 4,6-dehydratase EC=4.2.1.46 ; Lyase |
Pubmed 18043661 |
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3 |
339 |
S=1016 I=54 E=1.13791e-114 |
Bifunctional polymyxin resistance protein arnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase - Serratia proteamaculans (strain 568) |
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2 |
345 |
S=1008 I=54 E=1.06036e-113 |
Bifunctional polymyxin resistance protein arnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase - Photorhabdus luminescens subsp. laumondii |
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3 |
343 |
S=1002 I=55 E=5.80528e-113 |
Bifunctional polymyxin resistance protein arnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase - Yersinia pestis (strain Pestoides F) |
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1 |
351 |
S=1719 I=91 E=0 |
NAD-dependent epimerase/dehydratase - Ralstonia pickettii 12J |
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1 |
351 |
S=1719 I=91 E=0 |
NAD-dependent epimerase/dehydratase - Ralstonia pickettii 12D |
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2 |
351 |
S=1578 I=83 E=0 |
NAD-dependent epimerase/dehydratase - Burkholderia cenocepacia (strain MC0-3) |
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IPR016040 [G3DSA:3.40.50.720] | 2 |
285 |
NAD(P)-binding |
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[PTHR10366] | 6 |
347 |
- |
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[PTHR10366:SF35] | 301 |
347 |
- |
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[PTHR10366:SF35] | 6 |
285 |
- |
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[PTHR10366:SF35] | 6 |
347 |
- |
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IPR001509 [PF01370] | 4 |
256 |
NAD-dependent epimerase/dehydratase |
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IPR016040 [SSF51735] | 1 |
348 |
NAD(P)-binding |
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![]() RSc1448 |
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FASTA file |
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Codon Usage |
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![]() Multalin |
![]() RSc1450 |
ID | queE |
AC | NP_519570.1 |
LT | RSc1449 |
SY | RS03858 |
RX | strain GMI1000 |
OR | AL646052 from 1551351 to 1551989 on strand + |
DE | 7-carboxy-7-deazaguanine synthase |
IP | Radical SAM |
CL | I.D.2 purine ribonucleotide biosynthesis |
EC | |
GO | Molecular Function: iron-sulfur cluster binding (GO:0051536) Molecular Function: catalytic activity (GO:0003824) |
PM | |
AN | |
SQ | 212 aa |
........10........20........30........40........50 |
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2 |
125 |
S=147 I=36 E=1.87494e-09 |
Putative uncharacterized protein |
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5 |
125 |
S=120 I=33 E=3.35425e-06 |
Putative organic radical activating enzyme |
Pubmed 15793123 |
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2 |
212 |
S=212 I=31 E=1.51687e-17 |
Uncharacterized protein HI1189 - Haemophilus influenzae |
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1 |
211 |
S=178 I=34 E=2.14268e-13 |
Uncharacterized protein ygcF - Shigella flexneri |
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1 |
211 |
S=178 I=34 E=2.14268e-13 |
Uncharacterized protein ygcF - Escherichia coli (strain K12) |
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1 |
211 |
S=178 I=34 E=2.14268e-13 |
Uncharacterized protein ygcF - Escherichia coli O157:H7 |
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1 |
212 |
S=1044 I=91 E=2.59543e-117 |
Putative uncharacterized protein - Ralstonia pickettii 12D |
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1 |
212 |
S=1044 I=91 E=2.71107e-117 |
Putative uncharacterized protein - Ralstonia pickettii 12J |
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IPR007197 [PF04055] | 46 |
123 |
Radical SAM |
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[SSF102114] | 12 |
137 |
- |
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![]() RSc2169 |
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FASTA file |
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Codon Usage |
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![]() Multalin |
![]() RSc2171 |
ID | prhL |
AC | NP_520291.1 |
LT | RSc2170 |
SY | RS01429 |
RX | strain GMI1000 |
OR | AL646052 from 2352813 to 2353874 on strand - |
DE | Allophanate hydrolase subunit 2 |
IP | Allophanate hydrolase subunit 2 |
CL | I.I Degradation |
EC | |
GO | |
PM | |
AN | |
SQ | 353 aa |
........10........20........30........40........50 |
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NP_522499.1 lcl|RSp0938 |
12 |
304 |
S=624 I=50 E=4.68437e-69 |
hypothetical protein |
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24 |
328 |
S=557 I=43 E=7.08288e-59 |
Putative uncharacterized protein rni2 |
Pubmed 10722605 |
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13 |
300 |
S=450 I=38 E=6.76626e-46 |
Putative uncharacterized protein |
Pubmed 9583950 |
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12 |
335 |
S=446 I=34 E=2.25365e-45 |
Urea amidolyase |
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13 |
335 |
S=374 I=30 E=1.10386e-36 |
Allophanate hydrolase subunit 2 |
Pubmed 17636987 |
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10 |
304 |
S=348 I=34 E=1.5071e-33 |
Urea amidolyase EC=6.3.4.6 EC=3.5.1.54 ; Arginine metabolism ATP-binding Biotin Hydrolase Ligase Multifunctional enzyme Nucleotide-binding Pho |
Pubmed 1802034 |
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13 |
334 |
S=323 I=29 E=2.02206e-30 |
KipI antagonist ; Sporulation |
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13 |
304 |
S=283 I=34 E=1.15251e-25 |
Urea carboxylase homologue |
Pubmed 15090492 |
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92 |
161 |
S=209 I=59 E=1.02131e-16 |
Amidolyase homolog |
Pubmed 8855317 |
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12 |
328 |
S=697 I=49 E=5.87377e-76 |
Uncharacterized protein ybgK - Escherichia coli (strain K12) |
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12 |
333 |
S=568 I=43 E=2.08974e-60 |
Uncharacterized protein HI1730 - Haemophilus influenzae |
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10 |
304 |
S=348 I=34 E=9.56918e-34 |
Urea amidolyase [Includes: Urea carboxylase - Saccharomyces cerevisiae (Baker's yeast) |
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13 |
334 |
S=323 I=29 E=1.28389e-30 |
KipI antagonist - Bacillus subtilis |
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5 |
350 |
S=1472 I=81 E=8.89165e-169 |
Urea amidolyase related protein - Ralstonia pickettii 12J |
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12 |
350 |
S=1463 I=82 E=9.36135e-168 |
Urea amidolyase related protein - Ralstonia pickettii 12D |
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12 |
353 |
S=1008 I=62 E=1.31219e-112 |
Allophanate hydrolase subunit 2 - Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus) |
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[PTHR18866] | 8 |
137 |
- |
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[PTHR18866:SF14] | 8 |
137 |
- |
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IPR003778 [PF02626] | 34 |
324 |
Allophanate hydrolase subunit 2 |
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IPR003778 [SM00797] | 34 |
324 |
Allophanate hydrolase subunit 2 |
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IPR003778 [TIGR00724] | 12 |
335 |
Allophanate hydrolase subunit 2 |
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[signalp] | 1 |
18 |
- |
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![]() RSc2170 |
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FASTA file |
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Codon Usage |
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![]() Multalin |
![]() RSc2172 |
ID | prhK |
AC | NP_520292.1 |
LT | RSc2171 |
SY | RS01428 |
RX | strain GMI1000 |
OR | AL646052 from 2353871 to 2354518 on strand - |
DE | Allophanate hydrolase subunit 1 |
IP | Conserved hypothetical protein CHP00370 |
CL | I.I Degradation |
EC | |
GO | |
PM | |
AN | |
SQ | 215 aa |
........10........20........30........40........50 |
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NP_522500.1 lcl|RSp0939 |
4 |
213 |
S=490 I=47 E=5.15884e-53 |
hypothetical protein |
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1 |
213 |
S=523 I=48 E=4.49396e-55 |
Putative uncharacterized protein rni1 |
Pubmed 10722605 |
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1 |
209 |
S=409 I=39 E=3.24517e-41 |
Kinase A inhibitor ; ATP-binding Nucleotide-binding Protein Sporulation |
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38 |
209 |
S=399 I=46 E=6.18124e-40 |
Putative uncharacterized protein PF1273 |
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42 |
204 |
S=320 I=45 E=2.22954e-30 |
Putative uncharacterized protein |
Pubmed 9583950 |
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6 |
212 |
S=566 I=53 E=1.90124e-60 |
Uncharacterized protein ybgJ - Escherichia coli (strain K12) |
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6 |
212 |
S=566 I=53 E=1.90124e-60 |
Uncharacterized protein ybgJ - Escherichia coli O157:H7 |
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8 |
214 |
S=489 I=45 E=4.02901e-51 |
Uncharacterized protein HI1731 - Haemophilus influenzae |
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1 |
209 |
S=409 I=39 E=2.0777e-41 |
Kinase A inhibitor - Bacillus subtilis |
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1 |
215 |
S=1022 I=90 E=1.12214e-114 |
Allophanate hydrolase subunit 1 - Ralstonia pickettii 12J |
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1 |
215 |
S=1016 I=89 E=5.88145e-114 |
Allophanate hydrolase subunit 1 - Ralstonia pickettii 12D |
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2 |
215 |
S=769 I=68 E=5.63678e-84 |
Putative uncharacterized protein - Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus) |
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IPR003833 [PF02682] | 3 |
200 |
Allophanate hydrolase subunit 1 |
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IPR003833 [SM00796] | 3 |
200 |
Allophanate hydrolase subunit 1 |
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IPR010016 [TIGR00370] | 8 |
209 |
Conserved hypothetical protein CHP00370 |
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