Xanthomonas fuscans subsp. fuscans

  1. XFF4834R_chr03850hpaBXFF4834R_chr03850HpaB protein, type III secretion system

hpaB XFF4834R_chr03850
XFF4834R_chr03840
XFF4834R_chr03840
Cluster
DrawMap
XML file

FASTA file
Extract
Sequence
Codon
Usage
Framed OrthoMCL XFF4834R_chr03860
XFF4834R_chr03860
ID hpaB
AC XFF4834R_chr03850
LT XFF4834R_chr03850
OR XFF4834R_chr from 438692 to 439162 on strand -
DE HpaB protein, type III secretion system
IP
CL 4.3.A.6 The Type III (Virulence-related) Secretory Pathway (IIISP) Family GO:0030254 GO:0015448
EC
GO InterPro


Curated
PM
AN
CC COG: [S] Function unknown;
CC MODEL: XFF4834R
CC STATUS: curated by jacques (20110711)
MW 17663.9 Da
SQ 156 aa
 
........10........20........30........40........50
| | | | |
MSSARFETIVRQMCEALGLPDVQSVLSRRALWVEGFEVYLHEPTPQPDDE
VQEQALYLRISYGLPPAGRTLTVYRLLLEANLSVYAQDQAQLGLNDAGVI
VLIVRVPLDDDVDGSWICDLLAHYAEHGRYWNNNIFVAHDEMFEGIATGN
FLWLRA
X.species

NP_640751.1 lcl|hpaB-XAC0396

1

156

S=805 I=97 E=6.73412e-91

HpaB protein

X.species

YP_362147.1 lcl|hpaB-XCV0416

1

156

S=762 I=91 E=1.11195e-85

HpaB protein

X.species

NP_636594.1 lcl|hpaB-XCC1220

1

156

S=721 I=86 E=9.8866e-81

HpaB protein

pubmed

1

156

S=823 I=100 E=1.57913e-91

HpaB

Pubmed 15812033,18326683

 

prodomImg

pubmed

1

156

S=805 I=97 E=2.39576e-89

HpaB

Pubmed 12730176

 

prodomImg

pubmed

1

156

S=762 I=91 E=3.65737e-84

HpaB

Pubmed 9781876,11844763

 

prodomImg

pubmed

1

156

S=758 I=90 E=1.20759e-83

HpaB

Pubmed 11410350

 

prodomImg

pubmed

1

156

S=757 I=90 E=1.5415e-83

HpaB

Pubmed 15986924

 

prodomImg

PD357794

1

156

S=540 I=68 E=6.32017e-58

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pubmed

Set of Uniprot with relevant PubMed cross-references ncbi-blastp

8 hits
swiss-prot

Swiss-Prot ncbi-blastp

0 hits
XFF4834R

Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

1 hits
hamap

HAMAP scan

0 hits
Interpro Scan

IprScan

0 hits

Show or not Miscellaneous analyses

  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WB8Lmy3o/XFF4834R_chr03850.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WB8Lmy3o/XFF4834R_chr03850.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WB8Lmy3o/XFF4834R_chr03850.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WB8Lmy3o/XFF4834R_chr03850.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.