Xanthomonas fuscans subsp. fuscans

  1. XFF4834R_chr00100exbD1XFF4834R_chr00100biopolymer transport ExbD protein

exbD1 XFF4834R_chr00100
XFF4834R_chr00090
XFF4834R_chr00090
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Framed OrthoMCL XFF4834R_chr00110
XFF4834R_chr00110
ID exbD1
AC XFF4834R_chr00100
LT XFF4834R_chr00100
OR XFF4834R_chr from 12488 to 12910 on strand +
DE biopolymer transport ExbD protein
IP Biopolymer transport protein ExbD/TolR
CL 5.5.7 Fe aquisition GO:0006826
EC
GO InterPro
Biological Process: transport (GO:0006810)
Cellular Component: membrane (GO:0016020)
Molecular Function: transporter activity (GO:0005215)

Curated
PM
AN
CC COG: [U] Intracellular trafficking, secretion, and vesicular transport;
CC MODEL: XFF4834R
CC STATUS: curated by szurek (20101121)
MW 15184.5 Da
SQ 140 aa
 
........10........20........30........40........50
| | | | |
MAFSSGNSGGPMADINVTPLVDVMLVLLIIFIITAPLMSHKVKVELPEAN
LIQKEDAEKRAAPITLAVKEDGSLYWNDEPISKEALESRLSTAAQQTPQP
PLNLRGDRTTKMRTINEITKIAQGQGMLDVGFVATKVKGQ
XFF4834R

XFF4834R_chr00110 lcl|XFF4834R_chr00100914_0013327_f2_XFF4834R-XFF4834R_chr00110

1

133

S=251 I=39 E=2.26201e-24

XFF4834R

XFF4834R_chr00120 lcl|XFF4834R_chr00110830_0014237_f3_XFF4834R-XFF4834R_chr00120

1

133

S=245 I=41 E=1.14495e-23

XFF4834R

XFF4834R_chr14850 lcl|XFF4834R_chr15930563_1707012_f1_XFF4834R-XFF4834R_chr14850

13

74

S=120 I=45 E=1.60253e-08

XFF4834R

XFF4834R_chr21920 lcl|XFF4834R_chr23890351_2538815_f3_XFF4834R-XFF4834R_chr21920

15

95

S=104 I=32 E=1.25331e-06

X.species

YP_361741.1 lcl|exbD1-XCV0010

1

140

S=729 I=100 E=9.56865e-82

biopolymer transport ExbD protein

X.species

NP_640366.1 lcl|exbD1-XAC0010

1

140

S=729 I=100 E=9.56865e-82

biopolymer transport ExbD1 protein

X.species

NP_635405.1 lcl|exbD1-XCC0010

1

140

S=723 I=99 E=5.01518e-81

biopolymer transport ExbD1 protein

X.species

lcl|exbD1-XALc_0010

1

140

S=639 I=88 E=6.98769e-71

probable biopolymer transport exbd transmembrane protein

X.species

lcl|exbD2-XALc_0011

1

133

S=279 I=43 E=3.0732e-27

probable biopolymer transport exbd. transmembrane protein

X.species

YP_361742.1 lcl|exbD2-XCV0011

1

133

S=251 I=39 E=8.06872e-24

biopolymer transport ExbD protein

X.species

NP_640367.1 lcl|exbD2-XAC0011

1

133

S=251 I=39 E=8.06872e-24

biopolymer transport ExbD2 protein

X.species

NP_635406.1 lcl|exbD2-XCC0011

1

133

S=246 I=39 E=3.06295e-23

biopolymer transport ExbD2 protein

X.species

YP_361743.1 lcl|exbD3-XCV0012

1

133

S=245 I=41 E=4.01348e-23

biopolymer transport ExbD protein

X.species

lcl|tolR-XALc_2425

13

134

S=151 I=32 E=9.02534e-12

probable biopolymer transport tolr protein.

pubmed

1

140

S=723 I=99 E=1.51528e-79

ExbD1 ; Protein transport Transmembrane

Pubmed 12646254

 

prodomImg

pubmed

1

140

S=723 I=99 E=1.51528e-79

Biopolymer transport protein exbD1 ; Cell inner membrane Transmembrane

Pubmed 9371459

 

prodomImg

pubmed

1

133

S=289 I=45 E=5.22696e-27

ExbD ; Protein transport Transmembrane

Pubmed 14532085

 

prodomImg

pubmed

1

135

S=262 I=36 E=1.09399e-23

Biopolymer transport protein ExbD/TolR ExbD protein ; Transmembrane

Pubmed 10722583

 

prodomImg

pubmed

1

135

S=260 I=36 E=1.72152e-23

ExbD ; Protein transport Transmembrane

Pubmed 10517598

 

prodomImg

pubmed

1

133

S=246 I=39 E=9.25434e-22

Biopolymer transport protein exbD2 ; Cell inner membrane Transmembrane

Pubmed 9371459

 

prodomImg

pubmed

1

133

S=241 I=38 E=3.10935e-21

ExbD2 ; Protein transport Transmembrane

Pubmed 12646254

 

prodomImg

pubmed

1

140

S=238 I=40 E=9.16635e-21

Biopolymer transport protein exbD ; Cell inner membrane Transmembrane

Pubmed 9006036

 

prodomImg

pubmed

1

133

S=232 I=40 E=4.14249e-20

ExbD1 ; Protein transport Transmembrane

Pubmed 16457898,18671744

 

prodomImg

pubmed

1

140

S=232 I=39 E=4.76262e-20

Biopolymer transport protein exbD ; Cell inner membrane Transmembrane

Pubmed 9140974

 

prodomImg

Iprscan IPR003400 [PF02472]

8

137

Biopolymer transport protein ExbD/TolR

Iprscan [tmhmm]

15

37

-

PDA1K308

85

140

S=229 I=77 E=2.87329e-20

PD007356

24

84

S=141 I=47 E=1.19053e-09

PD689034

14

81

S=125 I=33 E=1.22004e-07

PDA1H5U6

1

25

S=118 I=92 E=8.45237e-07

PD694913

15

82

S=115 I=37 E=1.74284e-06

PDA379Q2

12

69

S=108 I=42 E=1.29466e-05

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pubmed

Set of Uniprot with relevant PubMed cross-references ncbi-blastp

34 hits
swiss-prot

Swiss-Prot ncbi-blastp

25 hits
XFF4834R

Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

4 hits
hamap

HAMAP scan

0 hits
Interpro Scan

IprScan

2 hits

Show or not Miscellaneous analyses

  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBlS5lmG/XFF4834R_chr00100.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBlS5lmG/XFF4834R_chr00100.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBlS5lmG/XFF4834R_chr00100.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBlS5lmG/XFF4834R_chr00100.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.