Xanthomonas fuscans subsp. fuscans

10 hits

  1. XFF4834R_chr42420XFF4834R_chr_4924899_4926086_f3_XFF4834R-XFF4834R_chr42420XFF4834R_chr42420putative zeta toxin of the postsegregational killing system
  2. XFF4834R_chr42510XFF4834R_chr_4930931_4931224_f2_XFF4834R-XFF4834R_chr42510XFF4834R_chr42510putative plasmid stabilisation system protein
  3. XFF4834R_pla00180XFF4834R_pla00110109_0012363_f1_XFF4834R-XFF4834R_pla00180XFF4834R_pla00180putative plasmid stability protein
  4. XFF4834R_pla00190XFF4834R_pla00110360_0012776_f3_XFF4834R-XFF4834R_pla00190XFF4834R_pla00190putative plasmid stability protein
  5. XFF4834R_pla00450XFF4834R_pla00450Putative plasmid partitioning protein
  6. XFF4834R_plb00030XFF4834R_plb00030Putative plasmid partitioning protein
  7. XFF4834R_plb00100XFF4834R_plb00100Putative replication protein RepA
  8. XFF4834R_plc00140StbBXFF4834R_plc00140probable plasmid stability protein
  9. XFF4834R_plc00400XFF4834R_plc00400Putative replication protein
  10. XFF4834R_plc00420XFF4834R_plc_0036006_0036590_f3_XFF4834R-XFF4834R_plc00420XFF4834R_plc00420Probable KrfA protein

XFF4834R_chr_4924899_4926086_f3_XFF4834R-XFF4834R_chr42420 XFF4834R_chr42420
XFF4834R_chr42410
XFF4834R_chr42410 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Framed OrthoMCL XFF4834R_chr42430
XFF4834R_chr42430
ID XFF4834R_chr_4924899_4926086_f3_XFF4834R-XFF4834R_chr42420
AC XFF4834R_chr42420
LT XFF4834R_chr42420
OR XFF4834R_chr from 4924899 to 4926086 on strand +
DE putative zeta toxin of the postsegregational killing system
IP
CL 8.2.1 replication and maintenance GO:0006261 GO:0006276
EC
GO InterPro


Curated
PM
AN
CC COG: [O] Posttranslational modification, protein turnover, chaperones;
CC MODEL: XFF4834R
CC STATUS: curated by lnoel (20100802)
MW 45701.9 Da
SQ 395 aa
  
........10........20........30........40........50
         |         |         |         |         |
MDDNRFQLSPRKHATIYEKIERHQFKDTAPTDQPQAIILGGQPGAGKSGL
LEASKQGFADRNVVTINGDELRYYHPQYLAIQKADERHFAELTDPHARPW
TKQLFDRTIETRRNVVFEGTMRESGPITETMRRLKAAGYYVVARVIAANE
RDSMAGIHRRYEEQKAAKGFGRWSNVQAHDDAYKGMPATLEYIERHKLAD
RVQVYDRKGNVLYDNELHGNEWKRQPVARAAIEAERERPPTPEERRQHEA
EWATILAMMAARRADEREIERVRDVARQYGGQQYPEHKPAEYERQDYGRQ
HPELRAPETGKTYQGPIVSADDKYVIQSVRKAGRELHIQHERLVLNSDRR
ELLNTGANVEIRYPYNRVGIVKEWGEKAIQGPASKGIEPRDFGKR

    






    

        
            
                X.species
            
                
        
YP_361658.1 lcl|XCVd0099

        
1

	
395

	
S=1712 I=83 E=0

	
putative zeta toxin of the postsegregational killing system

     	

   





    

        
            
                X.species
            
                
        
NP_644785.1 lcl|XACb0057-XACb0057

        
1

	
395

	
S=1712 I=83 E=0

	
hypothetical protein

     	

   





    

        
            
                X.species
            
                
        
NP_638807.2 lcl|XCC3461

        
1

	
215

	
S=261 I=29 E=1.87804e-24

	
hypothetical protein

     	

   





    

        
                pubmed
        
        

        
6

	
225

	
S=358 I=34 E=1.45497e-34

	
Putative uncharacterized protein ; Plasmid

	
Pubmed 9742696,9465390

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
31

	
215

	
S=230 I=31 E=4.91261e-19

	
Zeta-toxin ; ATP-binding Nucleotide-binding Plasmid

	
Pubmed 12195739

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
32

	
215

	
S=226 I=31 E=1.41085e-18

	
Toxin of epsilon-zeta postsegregational killing system ; Plasmid

	
Pubmed 8093174

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
32

	
215

	
S=226 I=31 E=1.41085e-18

	
Zeta-toxin ; ATP-binding Nucleotide-binding Plasmid

	
Pubmed 8293991,8093174

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
32

	
215

	
S=224 I=31 E=2.16281e-18

	
Zeta toxin ; Plasmid

	
Pubmed 18511120

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
31

	
215

	
S=230 I=31 E=3.34086e-19

	
Zeta-toxin ; ATP-binding Nucleotide-binding Plasmid

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
32

	
215

	
S=226 I=31 E=9.59456e-19

	
Zeta-toxin ; ATP-binding Nucleotide-binding Plasmid

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
26

	
215

	
S=223 I=30 E=2.17749e-18

	
Zeta-toxin ; ATP-binding Nucleotide-binding Plasmid

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
26

	
215

	
S=223 I=30 E=2.17749e-18

	
Zeta-toxin ; ATP-binding Nucleotide-binding Plasmid

	

    

    

         
        
prodomImg

    





    

        Iprscan
        
	[G3DSA:3.40.50.300]
	
2

	
298

	
	
-

    





    

        Iprscan
        
	[PF06414]
	
22

	
217

	
	
-

    





    

        Iprscan
        
	[seg]
	
226

	
246

	
	
-

    





    

        Iprscan
        
	[seg]
	
257

	
277

	
	
-

    





    

        
            
                
            
                
        
PD359515

        
20

	
225

	
S=491 I=49 E=5.23297e-52

    	
    





    

        
            
                
            
                
        
PD604836

        
279

	
395

	
S=247 I=48 E=1.93895e-22

    	
    





    

        
            
                
            
                
        
PD420755

        
1

	
147

	
S=208 I=35 E=9.86715e-18

    	
    





    

        
            
                
            
                
        
PD894853

        
1

	
32

	
S=129 I=75 E=3.12272e-08

    	
    





    

        
            
                
            
                
        
PDA9E307

        
169

	
215

	
S=109 I=40 E=1.01155e-05

    	
    





    

        Iprscan
        
	[SSF52540]
	
32

	
244

	
	
-

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            21 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            4 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                5 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_chr42420.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_chr42420.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_chr42420.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_chr42420.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






XFF4834R_chr_4930931_4931224_f2_XFF4834R-XFF4834R_chr42510 XFF4834R_chr42510




    

         
             
            XFF4834R_chr42500
            
XFF4834R_chr42500
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr42520
            
XFF4834R_chr42520
            
        		

    





    

        ID
        XFF4834R_chr_4930931_4931224_f2_XFF4834R-XFF4834R_chr42510
    

    

        AC
        XFF4834R_chr42510
    

    

        LT
        XFF4834R_chr42510
    

    

        OR
        XFF4834R_chr from 4930931 to 4931224 on strand +
    

   

        DE
        putative plasmid stabilisation system protein
  

   

        IP
        Plasmid stabilization system
  
  
  
  

        CL
        8.2.1 replication and maintenance	GO:0006261	GO:0006276 
    

  

        EC
        
    

    
    

        GO
        
            InterPro



            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [R] General function prediction only; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by pieretti (20101004)
  

  
  


    

        MW
        11068.6 Da
    


    

        SQ
        97 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MKVRWIAAARQDRADIIDYIAVETPRAALKMDDLFSEAAKRLGEFPKLGC
TGKIPGTRELIPHESYRLVYEVDEAADTVWVMTLIHTARQWPPARDD

    





Show or not Domain decomposition
 

    

        
            
                XFF4834R
            
                
        
XFF4834R_chr42580 lcl|XFF4834R_chr_4940252_4940536_r3_XFF4834R-XFF4834R_chr42580

        
23

	
96

	
S=188 I=49 E=4.00843e-17

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_plb00080 lcl|XFF4834R_plb_0006284_0006592_f2_XFF4834R-XFF4834R_plb00080

        
42

	
92

	
S=97 I=41 E=4.60633e-06

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr41860 lcl|XFF4834R_chr_4867768_4868874_f1_XFF4834R-XFF4834R_chr41860

        
24

	
76

	
S=88 I=41 E=5.43171e-05

	

     	

   





    

        
            
                X.species
            
                
        
YP_361533.1 lcl|XCVc0017

        
22

	
97

	
S=403 I=100 E=1.25956e-42

	
putative plasmid stabilisation system protein

     	

   





    

        
                pubmed
        
        

        
23

	
96

	
S=266 I=66 E=1.46587e-24

	
Plasmid stabilization protein ParE

	
Pubmed 16122561

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
31

	
95

	
S=242 I=71 E=1.1159e-21

	
RE protein ; Plasmid

	
Pubmed 18591274

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
27

	
92

	
S=142 I=39 E=1.84789e-09

	
YacB ; Plasmid

	
Pubmed 16251312

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
27

	
92

	
S=139 I=38 E=3.98006e-09

	
YacB ; Plasmid

	
Pubmed 19202093

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
27

	
92

	
S=138 I=38 E=4.65636e-09

	
YacB ; Plasmid

	
Pubmed 16885466

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR007712
	[PF05016]
	
3

	
91

	
	
Plasmid stabilisation system

    





    

        
            
                
            
                
        
PD066027

        
40

	
92

	
S=132 I=45 E=1.45115e-08

    	
    




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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            5 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            0 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            3 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                1 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_chr42510.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_chr42510.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_chr42510.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_chr42510.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






XFF4834R_pla00110109_0012363_f1_XFF4834R-XFF4834R_pla00180 XFF4834R_pla00180




    

         
             
            XFF4834R_pla_0016
            
XFF4834R_pla_0016
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_pla00190
            
XFF4834R_pla00190
            
        		

    





    

        ID
        XFF4834R_pla00110109_0012363_f1_XFF4834R-XFF4834R_pla00180
    

    

        AC
        XFF4834R_pla00180
    

    

        LT
        XFF4834R_pla00180
    

    

        OR
        XFF4834R_pla from 12109 to 12363 on strand +
    

   

        DE
        putative plasmid stability protein
  

   

        IP
        
  
  
  
  

        CL
        8.2.1 replication and maintenance	GO:0006261	GO:0006276 
    

  

        EC
        
    

    
    

        GO
        
            InterPro



            Curated

        		
    


  

        PM
        
    

  

        AN
        This CDS is included in the PCR fragment amplified with the primer X4e (position 11774 to 11796 on plasmid 1) the primer X4c (position 12586 to 12563 on plasmid 1) described by Audy et al 1994, and that allows with the specific dectection of phaseoli by PCR.
    

  

        CC
        COG: [R] General function prediction only; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by darrasse (20120930)
  

  
  


    

        MW
        9388.7 Da
    


    

        SQ
        84 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MAMLTVRNLPDDVHRALRMRAAQNGHSTEAEVREILATAVKPETRVRLGE
ALAALGRKIGLTNEDFEVFDRVRDKTPAVPPRLE

    





Show or not Domain decomposition
 

    

        
            
                XFF4834R
            
                
        
XFF4834R_chr42630 lcl|XFF4834R_chr_4945220_4945474_f2_XFF4834R-XFF4834R_chr42630

        
1

	
84

	
S=423 I=100 E=9.43857e-46

	

     	

   





    

        
            
                X.species
            
                
        
NP_644608.1 lcl|Y4JJ-XAC4314

        
1

	
84

	
S=213 I=52 E=8.66657e-20

	
plasmid stability protein

     	

   





    

        
                pubmed
        
        

        
1

	
78

	
S=200 I=51 E=1.49185e-16

	
Plasmid stability protein stbC

	
Pubmed 9326365

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
60

	
S=136 I=47 E=9.09454e-09

	
Trafficking protein A

	
Pubmed 10639460

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
84

	
S=233 I=58 E=1.06732e-20

	
Putative plasmid stability protein y4jJ

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
78

	
S=200 I=51 E=9.33353e-17

	
Plasmid stability protein stbC

	

    

    

         
        
prodomImg

    





    

        
            
                
            
                
        
PD028753

        
1

	
43

	
S=162 I=77 E=3.99658e-12

    	
    





    

        
            
                
            
                
        
PD218520

        
45

	
84

	
S=111 I=60 E=4.90217e-06

    	
    




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  Your email  
 
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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            2 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            2 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            1 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                0 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00180.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00180.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00180.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00180.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






XFF4834R_pla00110360_0012776_f3_XFF4834R-XFF4834R_pla00190 XFF4834R_pla00190




    

         
             
            XFF4834R_pla00180
            
XFF4834R_pla00180
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_pla00200
            
XFF4834R_pla00200
            
        		

    





    

        ID
        XFF4834R_pla00110360_0012776_f3_XFF4834R-XFF4834R_pla00190
    

    

        AC
        XFF4834R_pla00190
    

    

        LT
        XFF4834R_pla00190
    

    

        OR
        XFF4834R_pla from 12360 to 12776 on strand +
    

   

        DE
        putative plasmid stability protein
  

   

        IP
        PilT protein, N-terminal
  
  
  
  

        CL
        8.2.1 replication and maintenance	GO:0006261	GO:0006276 
    

  

        EC
        
    

    
    

        GO
        
            InterPro



            Curated

        		
    


  

        PM
        
    

  

        AN
        This gene includes the primer X4c (position 12586 to 12563 on plasmid 1) described by Audy et al 1994, and that allows with the primer X4e (position 11774 to 11796 on plasmid 1) the specific dectection of phaseoli by PCR.
    

  

        CC
        COG: [R] General function prediction only; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by darrasse (20120930)
  

  
  


    

        MW
        14832.8 Da
    


    

        SQ
        138 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MIVLDTNVVSEAMKPEPHPSVRTWLNDQAAETLYLSSVTLAELLFGIAAL
PAGKRKDMLEQALDGLMGLFRDRVLPFDIDAARRYAELAVTAKIGGRGFP
TPDGYIAAIAASRGFIVASRDTAPYEAAGVTVINPWEG

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr42640 lcl|XFF4834R_chr_4945471_4945755_f1_XFF4834R-XFF4834R_chr42640

        
1

	
47

	
S=249 I=100 E=3.01473e-24

	

     	

   





    

        
            
                X.species
            
                
        
NP_644609.1 lcl|Y4JK-XAC4315

        
1

	
136

	
S=316 I=51 E=1.02497e-31

	
plasmid stability protein

     	

   





    

        
            
                X.species
            
                
        
YP_361660.1 lcl|XCVd0101

        
3

	
132

	
S=136 I=34 E=6.56439e-10

	
hypothetical protein

     	

   





    

        
            
                X.species
            
                
        
NP_644787.1 lcl|vapC-XACb0059

        
3

	
132

	
S=136 I=34 E=6.56439e-10

	
virulence associated protein

     	

   





    

        
                pubmed
        
        

        
1

	
138

	
S=370 I=52 E=7.23096e-37

	
Plasmid stability protein stbB

	
Pubmed 9326365

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
137

	
S=303 I=45 E=1.02693e-28

	
Trafficking protein B

	
Pubmed 10639460

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
21

	
132

	
S=207 I=42 E=4.14171e-17

	
DNA capable of inhibiting gonococcal transformation, clone pGCU22.

	
Pubmed 3137581

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
138

	
S=191 I=36 E=4.20753e-15

	
Putative plasmid stability-like protein

	
Pubmed 16237001

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
136

	
S=150 I=34 E=3.58143e-10

	
Plasmid stability-like protein

	
Pubmed 9353917

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
126

	
S=133 I=30 E=3.73477e-08

	
Putative virulence associated protein C Putative virulence-associated protein C

	
Pubmed 18226230

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
136

	
S=119 I=32 E=1.99026e-06

	
MvpA protein Plasmid maintenance protein Putative STBORF2

	
Pubmed 11115111

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
136

	
S=118 I=32 E=2.65378e-06

	
MvpA ; Plasmid

	
Pubmed 14573649

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
136

	
S=117 I=32 E=3.66408e-06

	
Putative post-segregational-killing anti-toxin ; Plasmid

	
Pubmed 16926437

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
137

	
S=394 I=55 E=7.06828e-40

	
Putative plasmid stability protein y4jK

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
138

	
S=370 I=52 E=4.97469e-37

	
Plasmid stability protein stbB

	

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR002716
	[PF01850]
	
2

	
135

	
	
PilT protein, N-terminal

    





    

        
            
                
            
                
        
PD688407

        
1

	
39

	
S=133 I=62 E=1.03336e-08

    	
    





    

        
            
                
            
                
        
PD915843

        
40

	
99

	
S=101 I=56 E=7.65705e-05

    	
    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
  Validation code (copy this one 3wwQn5Pt)  
 
     



Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            9 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            2 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            1 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                1 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00190.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00190.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00190.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00190.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






 XFF4834R_pla00450




    

         
             
            XFF4834R_pla00440
            
XFF4834R_pla00440
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_pla_0047
            
XFF4834R_pla_0047
            
        		

    





    

        ID
        
    

    

        AC
        XFF4834R_pla00450
    

    

        LT
        XFF4834R_pla00450
    

    

        OR
        XFF4834R_pla from 35364 to 36002 on strand -
    

   

        DE
        Putative plasmid partitioning protein
  

   

        IP
        Cobyrinic acid a,c-diamide synthase
  
  
  
  

        CL
        8.2.1 replication and maintenance	GO:0006261	GO:0006276 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: cobalamin biosynthetic process (GO:0009236)
c-diamide synthase activity (GO:0042242)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [D] Cell cycle control, cell division, chromosome partitioning; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by szurek (20101121)
  

  
  


    

        MW
        21769.5 Da
    


    

        SQ
        212 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MKTVAIAVQKGGAGKTTIAVHLAVAAQQAGLRVALADTDPQGSAKAWAET
RSDSTLEVVAITSANVGAAVAAAAEEGYDLLIVDTPPHASAGIAAALEHA
DLALMPVRPSLLDLAAAPASIRLLHASGKPGAFILSSAPIRASETREIER
ELANTGIPVLETVIHDRTAYRRALAHGQAVGEFEPAGKAAFEVRALWREV
NTLLGATKGTHA

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_plb00030 lcl|XFF4834R_plb00030087_0003716_f3_XFF4834R-XFF4834R_plb00030

        
1

	
204

	
S=253 I=35 E=2.03171e-24

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr42750 lcl|XFF4834R_chr_4952141_4952770_f2_XFF4834R-XFF4834R_chr42750

        
9

	
196

	
S=217 I=32 E=4.51616e-20

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr01590 lcl|XFF4834R_chr01750622_0197254_f2_XFF4834R-XFF4834R_chr01590

        
1

	
107

	
S=172 I=44 E=1.43404e-14

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr42390 lcl|XFF4834R_chr_4923584_4924216_f2_XFF4834R-XFF4834R_chr42390

        
4

	
187

	
S=155 I=33 E=1.64596e-12

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr37920 lcl|XFF4834R_chr41010721_4383518_f3_XFF4834R-XFF4834R_chr37920

        
2

	
44

	
S=106 I=56 E=1.28298e-06

	

     	

   





    

        
            
                X.species
            
                
        
 lcl|parA-XALp_3174

        
1

	
206

	
S=384 I=38 E=9.83274e-40

	
probable plasmid partitioning protein

     	

   





    

        
            
                X.species
            
                
        
YP_361515.1 lcl|parA-XCVb0021

        
1

	
201

	
S=270 I=35 E=6.73851e-26

	
plasmid partitioning-family protein

     	

   





    

        
            
                X.species
            
                
        
NP_644727.1 lcl|parA-XACa0041

        
9

	
200

	
S=210 I=31 E=1.12054e-18

	
partition protein A

     	

   





    

        
            
                X.species
            
                
        
NP_640548.1 lcl|parA-XAC0192

        
1

	
107

	
S=172 I=44 E=5.27201e-14

	
partition protein

     	

   





    

        
            
                X.species
            
                
        
YP_361906.1 lcl|XCV0175

        
1

	
186

	
S=170 I=32 E=7.94222e-14

	
ParA family partition protein

     	

   





    

        
            
                X.species
            
                
        
NP_635569.1 lcl|parA-XCC0174

        
1

	
107

	
S=166 I=43 E=2.69186e-13

	
partition protein

     	

   





    

        
            
                X.species
            
                
        
NP_644747.1 lcl|parA-XACb0019

        
10

	
200

	
S=127 I=30 E=1.41848e-08

	
partition protein A

     	

   





    

        
            
                X.species
            
                
        
NP_644704.1 lcl|parA-XACa0018

        
10

	
200

	
S=127 I=30 E=1.41848e-08

	
partition protein A

     	

   





    

        
            
                X.species
            
                
        
YP_361521.1 lcl|XCVc0005

        
10

	
200

	
S=127 I=30 E=1.44344e-08

	
putative partition protein

     	

   





    

        
            
                X.species
            
                
        
NP_644782.1 lcl|parA-XACb0054

        
1

	
59

	
S=113 I=41 E=7.49349e-07

	
partition protein A

     	

   





    

        
                pubmed
        
        

        
1

	
197

	
S=343 I=41 E=3.16839e-33

	
Putative MinD/ParA family ATPase ; Plasmid

	
Pubmed 18227089

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
207

	
S=272 I=36 E=1.46003e-24

	
ParA partitioning protein ; Plasmid

	
Pubmed 15995187

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
207

	
S=272 I=36 E=1.46003e-24

	
Partitioning protein A ; Plasmid

	
Pubmed 17261525

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
204

	
S=271 I=34 E=1.98102e-24

	
ATPase ; Plasmid

	
Pubmed 16165318

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
207

	
S=270 I=36 E=2.25781e-24

	
ParA ; Plasmid

	
Pubmed 9742696,9465390

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
204

	
S=267 I=37 E=5.63988e-24

	
Partitioning protein ; Plasmid

	
Pubmed 19273683

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
204

	
S=256 I=36 E=1.2678e-22

	
ORF209 ; Plasmid

	
Pubmed 16269793

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
199

	
S=245 I=34 E=2.90006e-21

	
Partitioning protein

	
Pubmed 18448537

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
196

	
S=242 I=34 E=5.24675e-21

	
Plasmid partitioning protein-like

	
Pubmed 16697042

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
187

	
S=232 I=35 E=9.40206e-20

	
ParA ; Plasmid

	
Pubmed 14702321

    

    

         
        
prodomImg

    





    

        Iprscan
        
	[G3DSA:3.40.50.300]
	
2

	
200

	
	
-

    





    

        Iprscan
        IPR002586
	[PF01656]
	
4

	
172

	
	
Cobyrinic acid a,c-diamide synthase

    





    

        Iprscan
        
	[seg]
	
66

	
77

	
	
-

    





    

        Iprscan
        
	[seg]
	
109

	
120

	
	
-

    





    

        
            
                
            
                
        
PD860547

        
129

	
197

	
S=117 I=43 E=9.54685e-07

    	
    





    

        
            
                
            
                
        
PD000159

        
1

	
44

	
S=104 I=54 E=4.31085e-05

    	
    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
  Validation code (copy this one Qg4bVyHo)  
 
     



Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            102 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            7 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            5 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                4 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00450.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00450.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00450.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_pla00450.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






 XFF4834R_plb00030




    

         
             
            XFF4834R_plb00020
            
XFF4834R_plb00020
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_plb00040
            
XFF4834R_plb00040
            
        		

    





    

        ID
        
    

    

        AC
        XFF4834R_plb00030
    

    

        LT
        XFF4834R_plb00030
    

    

        OR
        XFF4834R_plb from 3087 to 3716 on strand +
    

   

        DE
        Putative plasmid partitioning protein
  

   

        IP
        Cobyrinic acid a,c-diamide synthase
  
  
  
  

        CL
        8.2.1 replication and maintenance	GO:0006261	GO:0006276 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: cobalamin biosynthetic process (GO:0009236)
c-diamide synthase activity (GO:0042242)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [D] Cell cycle control, cell division, chromosome partitioning; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by szurek (20101121)
  

  
  


    

        MW
        22073 Da
    


    

        SQ
        209 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MQVIAVLNQKGGSGKTTIATHLARVLQLDGADVLLVDSDPQGSARDWAAV
REDQPVTVVGIDRPTIDRDLKNVARKDFVVIDGAPQAADLAVSAIKAANF
VLIPVQPSPYDIWATADLVELVKQRIEVTDGKLQAAFVVSRAIKGTRIGA
EVTDALNGYGLPVLQARITQRVSYPGTAAAGSTVMDAEPDGDAAAEVRAL
ANEIKQKLI

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr42750 lcl|XFF4834R_chr_4952141_4952770_f2_XFF4834R-XFF4834R_chr42750

        
3

	
200

	
S=471 I=50 E=7.20472e-51

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_pla00450 lcl|XFF4834R_pla00340364_0036002_r1_XFF4834R-XFF4834R_pla00450

        
1

	
208

	
S=277 I=37 E=2.87676e-27

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr01590 lcl|XFF4834R_chr01750622_0197254_f2_XFF4834R-XFF4834R_chr01590

        
1

	
186

	
S=160 I=32 E=3.75832e-13

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr20530 lcl|XFF4834R_chr22270813_2374595_r2_XFF4834R-XFF4834R_chr20530

        
1

	
43

	
S=99 I=51 E=9.74923e-06

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr37920 lcl|XFF4834R_chr41010721_4383518_f3_XFF4834R-XFF4834R_chr37920

        
2

	
44

	
S=99 I=56 E=1.00952e-05

	

     	

   





    

        
            
                X.species
            
                
        
NP_644727.1 lcl|parA-XACa0041

        
7

	
206

	
S=476 I=51 E=6.79003e-51

	
partition protein A

     	

   





    

        
            
                X.species
            
                
        
YP_361515.1 lcl|parA-XCVb0021

        
1

	
208

	
S=245 I=33 E=6.86852e-23

	
plasmid partitioning-family protein

     	

   





    

        
            
                X.species
            
                
        
 lcl|parA-XALp_3174

        
1

	
204

	
S=228 I=31 E=8.23482e-21

	
probable plasmid partitioning protein

     	

   





    

        
            
                X.species
            
                
        
YP_361521.1 lcl|XCVc0005

        
3

	
206

	
S=161 I=32 E=9.48688e-13

	
putative partition protein

     	

   





    

        
            
                X.species
            
                
        
YP_361906.1 lcl|XCV0175

        
1

	
186

	
S=161 I=32 E=1.211e-12

	
ParA family partition protein

     	

   





    

        
            
                X.species
            
                
        
NP_640548.1 lcl|parA-XAC0192

        
1

	
186

	
S=160 I=32 E=1.3802e-12

	
partition protein

     	

   





    

        
            
                X.species
            
                
        
NP_635569.1 lcl|parA-XCC0174

        
1

	
186

	
S=159 I=32 E=2.02558e-12

	
partition protein

     	

   





    

        
            
                X.species
            
                
        
NP_644747.1 lcl|parA-XACb0019

        
3

	
204

	
S=151 I=30 E=1.9889e-11

	
partition protein A

     	

   





    

        
            
                X.species
            
                
        
NP_644704.1 lcl|parA-XACa0018

        
3

	
204

	
S=151 I=30 E=1.9889e-11

	
partition protein A

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_1373

        
1

	
59

	
S=110 I=45 E=1.84718e-06

	
putative chromosome partitioning protein

     	

   





    

        
                pubmed
        
        

        
1

	
209

	
S=987 I=92 E=2.74487e-111

	
Partitioning protein ; Plasmid

	
Pubmed 19273683

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
209

	
S=918 I=91 E=7.6283e-103

	
ParA ; Plasmid

	
Pubmed 14702321

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
208

	
S=891 I=82 E=1.36469e-99

	
ParA partitioning protein ; Plasmid

	
Pubmed 15995187

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
208

	
S=891 I=82 E=1.36469e-99

	
Partitioning protein A ; Plasmid

	
Pubmed 17261525

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
208

	
S=890 I=82 E=1.88424e-99

	
ParA ; Plasmid

	
Pubmed 9742696,9465390

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
205

	
S=889 I=83 E=2.4263e-99

	
ORF209 ; Plasmid

	
Pubmed 16269793

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
206

	
S=526 I=57 E=2.01658e-55

	
ParA protein

	
Pubmed 19286788

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
203

	
S=504 I=55 E=1.18182e-52

	
Partitioning protein

	
Pubmed 18448537

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
172

	
S=457 I=54 E=5.85403e-47

	
ORF58

	
Pubmed 12452967

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
186

	
S=439 I=48 E=7.52555e-45

	
Partition protein ; Plasmid

	
Pubmed 18413319

    

    

         
        
prodomImg

    





    

        Iprscan
        
	[G3DSA:3.40.50.300]
	
2

	
204

	
	
-

    





    

        Iprscan
        IPR002586
	[PF01656]
	
4

	
123

	
	
Cobyrinic acid a,c-diamide synthase

    





    

        
            
                
            
                
        
PD530901

        
127

	
191

	
S=189 I=58 E=1.80924e-15

    	
    





    

        
            
                
            
                
        
PDA1H218

        
46

	
86

	
S=144 I=72 E=5.08484e-10

    	
    





    

        
            
                
            
                
        
PDA1K9P9

        
1

	
28

	
S=131 I=93 E=2.39835e-08

    	
    





    

        
            
                
            
                
        
PDA1H0B9

        
90

	
123

	
S=125 I=68 E=1.14208e-07

    	
    





    

        
            
                
            
                
        
PD451937

        
130

	
204

	
S=117 I=34 E=1.02777e-06

    	
    





    

        
            
                
            
                
        
PDA1V2R9

        
133

	
208

	
S=111 I=32 E=5.43398e-06

    	
    





    

        
            
                
            
                
        
PD000159

        
1

	
58

	
S=109 I=45 E=9.66112e-06

    	
    





    

        
            
                
            
                
        
PDA8T3Q0

        
94

	
208

	
S=106 I=30 E=2.2118e-05

    	
    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            108 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            8 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            5 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                2 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plb00030.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plb00030.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plb00030.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plb00030.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






 XFF4834R_plb00100




    

         
             
            XFF4834R_plb00090
            
XFF4834R_plb00090
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_plb00110
            
XFF4834R_plb00110
            
        		

    





    

        ID
        
    

    

        AC
        XFF4834R_plb00100
    

    

        LT
        XFF4834R_plb00100
    

    

        OR
        XFF4834R_plb from 7121 to 8398 on strand +
    

   

        DE
        Putative replication protein RepA
  

   

        IP
        Plasmid encoded RepA protein
  
  
  
  

        CL
        8.2.1 replication and maintenance	GO:0006261	GO:0006276 
    

  

        EC
        
    

    
    

        GO
        
            InterPro



            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [S] Function unknown; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by szurek (20101122)
  

  
  


    

        MW
        46214.6 Da
    


    

        SQ
        425 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MTMADASKNPQGQTALDLGDTADTARDAFDETAYRNQMIAAGISIKDATD
VAAKTAAARRGQPMRGTASTRSRVRGSDSQVKEQPPAGSFSPIGALLGGI
LPPAVKKTGERIAYAAEKATPAQKAKAGRAAVLSEQERKLLDKATTIASV
PPTGEDMAFTHAVLCQVGLPRAKIEAREFMRQSGAAWINVQAGWLDEGRG
PVQQPVPYGVMPRLALAWVSSYAKRHNTREIPIGDSAAEFLRLMLGEDTV
AQGARHATLRKQMHALAACRLQLGFKGRTFNGQPVEQFDAWLSNRDAPQR
PLWPGVMTLSEHYFNELQNSAVPLDNRALHALKGSALALDVYCWLAHRLH
RIEGKGVTLHWKSIREQFAQEYKGKDPDKDFKKEFLPVLRKVQAVYPAAN
VKQVTGGLLLIGSPPPIPKLPKGLK

    





Show or not Domain decomposition
 

    

        
            
                X.species
            
                
        
NP_642756.1 lcl|repA-XAC2441

        
117

	
405

	
S=993 I=69 E=3.87675e-113

	
replication protein

     	

   





    

        
            
                X.species
            
                
        
YP_361657.1 lcl|XCVd0098

        
117

	
405

	
S=792 I=52 E=1.03565e-88

	
putative replication protein A

     	

   





    

        
            
                X.species
            
                
        
NP_644784.1 lcl|repA-XACb0056

        
117

	
405

	
S=788 I=52 E=2.82267e-88

	
replication protein A

     	

   





    

        
                pubmed
        
        

        
132

	
405

	
S=1162 I=78 E=5.19188e-132

	
RepA ; Plasmid

	
Pubmed 14702321

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
112

	
405

	
S=1128 I=74 E=6.2687e-128

	
Probable RepA ; Plasmid

	
Pubmed 16697042

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
109

	
405

	
S=1075 I=72 E=1.65611e-121

	
Replication protein ; Plasmid

	
Pubmed 19273683

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
136

	
405

	
S=739 I=56 E=9.99421e-81

	
Putative replication protein A ; Plasmid

	
Pubmed 18227089

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
133

	
405

	
S=714 I=47 E=1.05046e-77

	
Replication protein

	
Pubmed 11544236

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
146

	
402

	
S=371 I=34 E=3.5626e-36

	
Replication protein ; Plasmid

	
Pubmed 10618203

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
120

	
403

	
S=289 I=29 E=3.53297e-26

	
RepA protein ; Plasmid

	
Pubmed 11812851

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
158

	
401

	
S=257 I=32 E=2.25724e-22

	
RepA replication protein ; Plasmid

	
Pubmed 10049392

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
129

	
401

	
S=250 I=27 E=1.67677e-21

	
RepA protein

	
Pubmed 12055285

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
137

	
401

	
S=249 I=29 E=2.2751e-21

	
Plasmid replication protein

	
Pubmed 15033235

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR006881
	[PF04796]
	
206

	
363

	
	
Plasmid encoded RepA protein

    





    

        Iprscan
        
	[seg]
	
46

	
60

	
	
-

    





    

        Iprscan
        
	[seg]
	
406

	
425

	
	
-

    





    

        
            
                
            
                
        
PDA098C8

        
132

	
205

	
S=271 I=64 E=2.62591e-25

    	
    





    

        
            
                
            
                
        
PDA1L386

        
276

	
317

	
S=155 I=62 E=2.48468e-11

    	
    





    

        
            
                
            
                
        
PDA1G5X4

        
318

	
368

	
S=153 I=51 E=5.21342e-11

    	
    





    

        
            
                
            
                
        
PD017750

        
206

	
276

	
S=137 I=43 E=4.14905e-09

    	
    





    

        
            
                
            
                
        
PDA8K383

        
274

	
405

	
S=118 I=24 E=8.92145e-07

    	
    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            21 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            0 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                3 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plb00100.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plb00100.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plb00100.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plb00100.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






StbB XFF4834R_plc00140




    

         
             
            XFF4834R_plc00130
            
XFF4834R_plc00130
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_plc00150
            
XFF4834R_plc00150
            
        		

    





    

        ID
        StbB
    

    

        AC
        XFF4834R_plc00140
    

    

        LT
        XFF4834R_plc00140
    

    

        OR
        XFF4834R_plc from 7504 to 8205 on strand -
    

   

        DE
        probable plasmid stability protein
  

   

        IP
        
  
  
  
  

        CL
        8.2.1 replication and maintenance	GO:0006261	GO:0006276 
    

  

        EC
        
    

    
    

        GO
        
            InterPro



            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [C] Energy production and conversion; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by opruvost (20100506)
  

  
  


    

        MW
        25564.9 Da
    


    

        SQ
        233 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MKIAVINFSGNTGKSTVSKHLLYPRLKDAEYIAVESINADEGEGEGDSVR
GKQFGALQEQLLVIDSAVIDVGSSNVEDFVKLMRQYRGSHEDMDLFVIPA
VKEAKQIKDTIATIQALAAMGVPAKKIRVVFNKLEADDTVEDAFYPLIAF
HQDTKSFTLRPAAAIQYSELFQRLRALNVTIGELVSDTTDYKALLREAKT
PEDKQAIAAKISAKRLAASAQENLDSVFAVLTK

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr42470 lcl|XFF4834R_chr_4928676_4929383_r2_XFF4834R-XFF4834R_chr42470

        
1

	
233

	
S=585 I=50 E=1.49971e-64

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr42470 lcl|XFF4834R_chr_4928676_4929383_r2_XFF4834R-XFF4834R_chr42470

        
1

	
233

	
S=585 I=50 E=1.49971e-64

	

     	

   





    

        
            
                X.species
            
                
        
 lcl|stbB-XALq_3211

        
1

	
233

	
S=1110 I=92 E=1.12576e-127

	
putative stable plasmid inheritance protein

     	

   





    

        
            
                X.species
            
                
        
YP_361529.1 lcl|XCVc0013

        
1

	
208

	
S=556 I=52 E=1.90917e-60

	
putative plasmid stable inheritance protein

     	

   





    

        
            
                X.species
            
                
        
NP_644750.1 lcl|XACb0022-XACb0022

        
71

	
233

	
S=431 I=53 E=2.42779e-45

	
hypothetical protein

     	

   





    

        
            
                X.species
            
                
        
NP_644701.1 lcl|XACa0015-XACa0015

        
71

	
233

	
S=431 I=53 E=2.42779e-45

	
hypothetical protein

     	

   





    

        
            
                X.species
            
                
        
NP_644751.1 lcl|XACb0023-XACb0023

        
1

	
71

	
S=186 I=49 E=1.12844e-15

	
hypothetical protein

     	

   





    

        
            
                X.species
            
                
        
NP_644700.1 lcl|XACa0014-XACa0014

        
1

	
71

	
S=186 I=49 E=1.12844e-15

	
hypothetical protein

     	

   





    

        
                pubmed
        
        

        
1

	
233

	
S=902 I=72 E=6.87083e-101

	
Putative uncharacterized protein ; Plasmid

	
Pubmed 14645321

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
233

	
S=902 I=72 E=6.87083e-101

	
StbB ; Plasmid

	
Pubmed 18268088

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
233

	
S=897 I=71 E=3.15971e-100

	
Putative uncharacterized protein ; Plasmid

	
Pubmed 16391056,7022127

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
233

	
S=895 I=71 E=5.10394e-100

	
Conserved hypothetical plasmid protein

	
Pubmed 18268088

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
231

	
S=571 I=50 E=9.58375e-61

	
Putative uncharacterized protein ; Plasmid

	
Pubmed 12534468

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
231

	
S=569 I=51 E=1.56164e-60

	
Putative uncharacterized protein orf16 ; Plasmid

	
Pubmed 16707697,2175388

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
231

	
S=555 I=50 E=9.00129e-59

	
Putative uncharacterized protein ; Plasmid

	
Pubmed 15288784

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
231

	
S=555 I=50 E=9.00129e-59

	
Putative uncharacterized protein ; Plasmid

	
Pubmed 10719200

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
231

	
S=419 I=38 E=2.27743e-42

	
Stability/partitioning determinant ; Plasmid

	
Pubmed 15262947

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
231

	
S=402 I=37 E=2.65997e-40

	
Stability protein ; Plasmid

	
Pubmed 14634868

    

    

         
        
prodomImg

    





    

        
            
                
            
                
        
PD117512

        
72

	
213

	
S=390 I=55 E=8.01326e-40

    	
    





    

        
            
                
            
                
        
PD683571

        
1

	
77

	
S=195 I=47 E=3.61498e-16

    	
    




Show or not Suggestions
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ID


DE


EC


GO


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CL

 
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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            18 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            0 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            2 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                0 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plc00140.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plc00140.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plc00140.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBKREo1E/XFF4834R_plc00140.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






 XFF4834R_plc00400




    

         
             
            XFF4834R_plc00390
            
XFF4834R_plc00390
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_plc00410
            
XFF4834R_plc00410
            
        		

    





    

        ID
        
    

    

        AC
        XFF4834R_plc00400
    

    

        LT
        XFF4834R_plc00400
    

    

        OR
        XFF4834R_plc from 32608 to 34101 on strand +
    

   

        DE
        Putative replication protein
  

   

        IP
        
  
  
  
  

        CL
        8.2.1 replication and maintenance	GO:0006261	GO:0006276 
    

  

        EC
        
    

    
    

        GO
        
            InterPro



            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [S] Function unknown; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by szurek (20101122)
  

  
  


    

        MW
        55522.7 Da
    


    

        SQ
        497 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MGTKTQAQLALFSIDDEAQTYHDAGRTGFFSLLVDQRGEKRQSSHKLTDM
PAVLGLIDKDRDTWMTQAEFMRPNRRVVNLLRIGLLFADIDTYRQPWAVG
RTPEQLAAAVLFHCAEEGLPTPSLIVYSGRGLQAKWLMDGTIPRQALPRW
NACQRYLIDRLAALGADPQAKDASRVLRLVDTVNTKSGNICRVVHVESGQ
DGHPIRYNFEYLAEALLPKARWTIEQQRQDRADRRERQQLRLLPGGKSDN
LRGFSGRQLAWDRLEDLRTLATLRGGVREGERMQHLFWRLNFLLLSGATH
SGQMYHEAAALAGELDARWNYRSKELMTLYSKAKAYEAGEKVTLGDKEFA
PLYTPKNDTLINLFQITSDEQAQLRTIIGAGMAKERDRKRHEAKRRAAGA
VDRETYLDAAQAKRKQAQALKAEGLSVRVIAQRMGVSVGAVAGYLKAPQE
RSRSVRITADQSSMSAGIAGTADGAQCGVQGPSVLLMAEPRGRDLRA

    





Show or not Domain decomposition
 

    

        
            
                X.species
            
                
        
 lcl|XALq_3198

        
1

	
490

	
S=2131 I=83 E=0

	
putative replication protein

     	

   





    

        
                pubmed
        
        

        
6

	
493

	
S=1915 I=74 E=0

	
Replication protein ; Plasmid

	
Pubmed 18591274

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
8

	
483

	
S=1629 I=69 E=0

	
Replication protein ; Plasmid

	
Pubmed 18413319

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
6

	
458

	
S=1618 I=68 E=0

	
Replication initiation protein ; Plasmid

	
Pubmed 17261525

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
6

	
385

	
S=1464 I=72 E=1.56453e-168

	
RepA replication protein ; Plasmid

	
Pubmed 15995187