Xanthomonas fuscans subsp. fuscans

3 hits

  1. XFF4834R_chr02980purUXFF4834R_chr02980 probable formyltetrahydrofolate hydrolase
  2. XFF4834R_chr07950metFXFF4834R_chr079505,10-methylenetetrahydrofolate reductase
  3. XFF4834R_chr08500folAXFF4834R_chr08500probable dihydrofolate reductase

purU XFF4834R_chr02980
XFF4834R_chr02970
XFF4834R_chr02970 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Framed OrthoMCL XFF4834R_chr02990
XFF4834R_chr02990
ID purU
AC XFF4834R_chr02980
LT XFF4834R_chr02980
OR XFF4834R_chr from 345897 to 346748 on strand +
DE probable formyltetrahydrofolate hydrolase
IP Formyltetrahydrofolate deformylase
CL 1.7.17 Formyl-tetrahydrofolate biosynthesis GO:0009257
EC
GO InterPro
Biological Process: metabolic process (GO:0008152)
Biological Process: 'de novo' IMP biosynthetic process (GO:0006189)
Biological Process: biosynthetic process (GO:0009058)
Molecular Function: formyltetrahydrofolate deformylase activity (GO:0008864)
Molecular Function: amino acid binding (GO:0016597)
formyl- and related transferase activity (GO:0016742)

Curated
PM
AN modif du start
CC COG: [F] Nucleotide transport and metabolism;
CC MODEL: XFF4834R
CC STATUS: curated by darrasse (20110701)
MW 31745.2 Da
SQ 283 aa
  
........10........20........30........40........50
         |         |         |         |         |
MRSDYILTLSCPDRTGIVYRVTGLLFDLACNILDAQQFGDDESGRFFLRV
HFDKPAKTDIATLEQRFAVLADEFQMAWQLHDARRRARLLVLVSKQGHCL
NDLLFRMHSRQLPVEIAAVVSNHTDFAALAGSYGIAFHHLPVSADTRAAQ
EAQLLALVDALQIDLVVLARYMQILSPQLCRALAGRAINIHHSFLPSFKG
AQPYHQAHARGVKIIGATAHYVTEDLDEGPIIEQDVARVDHAMTPRDLVR
LGSDIESLVLARAVRRHVEHRIVLNGHRTVVFR

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr16780 purN-XFF4834R_chr16780

        
162

	
234

	
S=138 I=42 E=2.51234e-10

	
phosphoribosylglycinamide formyltransferase 1

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr36920 fmt-XFF4834R_chr36920

        
153

	
232

	
S=96 I=33 E=3.51511e-05

	
10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase

     	

   





    

        
            
                X.species
            
                
        
NP_640680.1 purU-XAC0324

        
1

	
283

	
S=1376 I=94 E=9.759e-160

	
formyltetrahydrofolate deformylase

     	

   





    

        
            
                X.species
            
                
        
YP_362064.1 purU-XCV0333

        
1

	
283

	
S=1367 I=93 E=1.20204e-158

	
formyltetrahydrofolate deformylase

     	

   





    

        
            
                X.species
            
                
        
NP_635705.1 purU-XCC0310

        
1

	
283

	
S=1317 I=89 E=1.33958e-152

	
formyltetrahydrofolate deformylase

     	

   





    

        
            
                X.species
            
                
        
NP_638139.1 purN-XCC2791

        
94

	
234

	
S=172 I=35 E=7.06911e-14

	
phosphoribosylglycinamide formyltransferase

     	

   





    

        
            
                X.species
            
                
        
XALc_2128 PurU-XALc_2128

        
94

	
250

	
S=155 I=31 E=9.08758e-12

	
putative phosphoribosylglycinamide formyltransferase protein

     	

   





    

        
            
                X.species
            
                
        
YP_364837.1 purN-XCV3106

        
158

	
234

	
S=141 I=42 E=3.79378e-10

	
phosphoribosylglycinamide formyltransferase

     	

   





    

        
            
                X.species
            
                
        
NP_643270.1 purN-XAC2961

        
162

	
234

	
S=139 I=42 E=8.38773e-10

	
phosphoribosylglycinamide formyltransferase

     	

   





    

        
            
                X.species
            
                
        
NP_639093.1 fmt-XCC3748

        
153

	
232

	
S=102 I=34 E=2.55192e-05

	
methionyl-tRNA formyltransferase

     	

   





    

        
            
                X.species
            
                
        
XALc_2857 Fmt-XALc_2857

        
160

	
244

	
S=98 I=34 E=7.01618e-05

	
putative methionyl-trna formyltransferase protein

     	

   





    

        
                pubmed
        
        

        
6

	
282

	
S=776 I=55 E=1.87274e-85

	
Putative formyltetrahydrofolate deformylase ; Plasmid

	
Pubmed 7815950,8588735

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
283

	
S=749 I=54 E=3.75241e-82

	
Putative 10-formyltetrahydrofolate deformylase

	
Pubmed 11422368

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
283

	
S=733 I=52 E=3.20205e-80

	
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis

	
Pubmed 7543100

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
283

	
S=731 I=52 E=5.26331e-80

	
Putative formyltetrahydrofolate deformylase

	
Pubmed 11422368

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
282

	
S=705 I=50 E=8.48065e-77

	
PurU protein

	
Pubmed 10200311

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
5

	
283

	
S=733 I=52 E=2.18166e-80

	
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
7

	
282

	
S=653 I=46 E=1.21689e-70

	
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
7

	
282

	
S=640 I=48 E=4.19345e-69

	
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
7

	
282

	
S=575 I=45 E=2.74105e-61

	
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
7

	
282

	
S=575 I=45 E=2.74105e-61

	
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis

	

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR004810
	[PR01575]
	
7

	
33

	
	
Formyltetrahydrofolate deformylase

    





    

        Iprscan
        IPR004810
	[PR01575]
	
39

	
51

	
	
Formyltetrahydrofolate deformylase

    





    

        Iprscan
        IPR004810
	[PR01575]
	
88

	
110

	
	
Formyltetrahydrofolate deformylase

    





    

        Iprscan
        IPR004810
	[PR01575]
	
110

	
137

	
	
Formyltetrahydrofolate deformylase

    





    

        Iprscan
        IPR004810
	[PR01575]
	
234

	
256

	
	
Formyltetrahydrofolate deformylase

    





    

        Iprscan
        IPR004810
	[PR01575]
	
256

	
281

	
	
Formyltetrahydrofolate deformylase

    





    

        Iprscan
        IPR002376
	[G3DSA:3.40.50.170]
	
87

	
281

	
	
Formyl transferase, N-terminal

    





    

        Iprscan
        IPR004810
	[PIRSF036480]
	
1

	
283

	
	
Formyltetrahydrofolate deformylase

    





    

        Iprscan
        
	[PTHR10520:SF7]
	
165

	
283

	
	
-

    





    

        Iprscan
        
	[PTHR10520]
	
165

	
283

	
	
-

    





    

        Iprscan
        IPR002376
	[PF00551]
	
88

	
264

	
	
Formyl transferase, N-terminal

    





    

        Iprscan
        IPR002912
	[PF01842]
	
5

	
66

	
	
Amino acid-binding ACT

    





    

        Iprscan
        IPR004810
	[TIGR00655]
	
5

	
282

	
	
Formyltetrahydrofolate deformylase

    





    

        Iprscan
        
	[seg]
	
83

	
93

	
	
-

    





    

        
            
                
            
                
        
PD001209

        
162

	
275

	
S=243 I=47 E=6.50625e-22

    	
    





    

        
            
                
            
                
        
PD407153

        
31

	
109

	
S=151 I=42 E=9.21697e-11

    	
    





    

        
            
                
            
                
        
PDA751U7

        
108

	
136

	
S=127 I=90 E=6.95556e-08

    	
    





    

        
            
                
            
                
        
PD403042

        
111

	
147

	
S=123 I=59 E=1.94599e-07

    	
    





    

        
            
                
            
                
        
PDA6E9S5

        
232

	
271

	
S=122 I=68 E=2.3781e-07

    	
    





    

        
            
                
            
                
        
PDA1F8S3

        
6

	
37

	
S=117 I=66 E=1.15236e-06

    	
    





    

        
            
                
            
                
        
PD237291

        
254

	
282

	
S=105 I=66 E=2.85115e-05

    	
    





    

        
            
                
            
                
        
PDA1J3X1

        
112

	
139

	
S=103 I=71 E=4.64585e-05

    	
    





    

        
            
                
            
                
        
PDA751U2

        
112

	
135

	
S=101 I=88 E=8.55303e-05

    	
    





    

        Iprscan
        IPR002376
	[SSF53328]
	
87

	
283

	
	
Formyl transferase, N-terminal

    





    

        Iprscan
        
	[SSF55021]
	
1

	
88

	
	
-

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            78 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            210 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            3 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                16 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr02980.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr02980.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr02980.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr02980.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






metF XFF4834R_chr07950




    

         
             
            XFF4834R_chr07940
            
XFF4834R_chr07940
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr07960
            
XFF4834R_chr07960
            
        		

    





    

        ID
        metF
    

    

        AC
        XFF4834R_chr07950
    

    

        LT
        XFF4834R_chr07950
    

    

        OR
        XFF4834R_chr from 919838 to 920665 on strand -
    

   

        DE
        5,10-methylenetetrahydrofolate reductase
  

   

        IP
        Methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase
  
  
  
  

        CL
        1.7.17 Formyl-tetrahydrofolate biosynthesis	GO:0009257 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: methionine biosynthetic process (GO:0009086)
Biological Process: oxidation reduction (GO:0055114)
Biological Process: methionine metabolic process (GO:0006555)
Molecular Function: methylenetetrahydrofolate reductase (NADPH) activity (GO:0004489)


            Curated

        		
    


  

        PM
        
    

  

        AN
        according to E.coli annotation
    

  

        CC
        COG: [E] Amino acid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by darrasse (20120320)
  

  
  


    

        MW
        30306.2 Da
    


    

        SQ
        275 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MTHLSFEFYPPKTDDQRAQLDRTAARLKGYAPEYVSCTFGAGGSTLSYTS
ETVRHLKQKHGFEAAPHLSCVGGSRQEIRELLKLYRAIGCTRIVALRGDL
PSGMGHPGDLRYASDLIAFIRAEHGDAFRIEVGAYPETHPQAADALSDLR
YFKAKVDAGADAAITQYFYNADAYFHFRDAVQRMGVEIPIIPGIMPISNF
SQLRRFSEQCGAEIPRWIGKKMQSYGDDADAVRAFGAEVVAALCERLIAG
GAPALHFYTLNLAKPTTQVLQLLGR

    






    

        
            
                X.species
            
                
        
NP_641143.1 lcl|metF-XAC0791

        
1

	
275

	
S=1460 I=100 E=5.85676e-170

	
5,10-methylenetetrahydrofolate reductase

     	

   





    

        
            
                X.species
            
                
        
YP_362573.1 lcl|metF-XCV0842

        
1

	
275

	
S=1449 I=99 E=1.24945e-168

	
5,10-methylenetetrahydrofolate reductase

     	

   





    

        
            
                X.species
            
                
        
NP_636130.1 lcl|metF-XCC0739

        
1

	
275

	
S=1419 I=96 E=5.88342e-165

	
5,10-methylenetetrahydrofolate reductase

     	

   





    

        
            
                X.species
            
                
        
 lcl|metF-XALc_2802

        
1

	
273

	
S=1302 I=86 E=1.00717e-150

	
putative 5,10-methylenetetrahydrofolate reductase protein

     	

   





    

        
            
                X.species
            
                
        
NP_635709.1 lcl|metF-XCC0314

        
61

	
275

	
S=110 I=27 E=2.15434e-06

	
5,10-methylenetetrahydrofolate reductase

     	

   





    

        
            
                X.species
            
                
        
NP_640687.1 lcl|metF-XAC0331

        
58

	
211

	
S=98 I=26 E=7.35951e-05

	
5,10-methylenetetrahydrofolate reductase

     	

   





    

        
            
                X.species
            
                
        
YP_362071.1 lcl|XCV0340

        
55

	
211

	
S=98 I=27 E=7.55454e-05

	
putative 5,10-methylenetetrahydrofolate reductase

     	

   





    

        
                pubmed
        
        

        
3

	
273

	
S=812 I=57 E=8.85059e-90

	
Methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Oxidoreductase

	
Pubmed 15305924

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
273

	
S=810 I=56 E=1.36867e-89

	
Methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Oxidoreductase

	
Pubmed 18460806

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
32

	
274

	
S=737 I=55 E=9.33714e-81

	
Methylenetetrahydrofolate reductase EC=1.5.1.20 ; FAD Flavoprotein Oxidoreductase Plasmid

	
Pubmed 12673061

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
274

	
S=567 I=40 E=3.54706e-60

	
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase

	
Pubmed 2841568

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
274

	
S=564 I=40 E=8.78345e-60

	
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase

	
Pubmed 6356036,8346018

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
274

	
S=555 I=39 E=1.19078e-58

	
Methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Oxidoreductase

	
Pubmed 11286884

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
274

	
S=516 I=38 E=5.70099e-54

	
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase

	
Pubmed 16645985

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
274

	
S=509 I=38 E=4.58063e-53

	
Methylenetetrahydrofolate reductase 1 EC=1.5.1.20 ; Alternative splicing FAD Flavoprotein NAD Oxidoreductase

	
Pubmed 10593891

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
274

	
S=504 I=39 E=1.51243e-52

	
Methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Oxidoreductase

	
Pubmed 17981978

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
274

	
S=496 I=36 E=1.43415e-51

	
Methylenetetrahydrofolate reductase 2 EC=1.5.1.20 ; FAD Flavoprotein NAD Oxidoreductase

	
Pubmed 10593891

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
4

	
273

	
S=596 I=41 E=7.88968e-64

	
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
3

	
274

	
S=571 I=40 E=9.45122e-61

	
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
3

	
274

	
S=567 I=40 E=2.44465e-60

	
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase

	

    

    

         
        
prodomImg

    





    

        Iprscan
        
	[G3DSA:3.20.20.220]
	
2

	
275

	
	
-

    





    

        Iprscan
        
	[PTHR21091]
	
67

	
275

	
	
-

    





    

        Iprscan
        
	[PTHR21091]
	
67

	
275

	
	
-

    





    

        Iprscan
        
	[PTHR21091:SF1]
	
67

	
275

	
	
-

    





    

        Iprscan
        IPR003171
	[PF02219]
	
1

	
274

	
	
Methylenetetrahydrofolate reductase

    





    

        Iprscan
        IPR004620
	[TIGR00676]
	
4

	
274

	
	
5,10-methylenetetrahydrofolate reductase

    





    

        
            
                
            
                
        
PD406226

        
3

	
274

	
S=694 I=52 E=1.22612e-76

    	
    





    

        Iprscan
        
	[SSF51730]
	
4

	
274

	
	
-

    




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Suggest an annotation


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  Your email  
 
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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            34 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            24 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                7 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr07950.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr07950.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr07950.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr07950.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






folA XFF4834R_chr08500




    

         
             
            XFF4834R_chr08490
            
XFF4834R_chr08490
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr08510
            
XFF4834R_chr08510
            
        		

    





    

        ID
        folA
    

    

        AC
        XFF4834R_chr08500
    

    

        LT
        XFF4834R_chr08500
    

    

        OR
        XFF4834R_chr from 986707 to 987201 on strand +
    

   

        DE
        probable dihydrofolate reductase
  

   

        IP
        Dihydrofolate reductase region
  
  
  
  

        CL
        1.7.17 Formyl-tetrahydrofolate biosynthesis	GO:0009257 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: oxidation reduction (GO:0055114)
Biological Process: nucleotide biosynthetic process (GO:0009165)
Biological Process: glycine biosynthetic process (GO:0006545)
Molecular Function: dihydrofolate reductase activity (GO:0004146)
Molecular Function: NADP or NADPH binding (GO:0050661)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [H] Coenzyme transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by pieretti (20100330)
  

  
  


    

        MW
        18194.6 Da
    


    

        SQ
        164 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MKLTLIVAFDRNNAIGRDNDLPWKLPDDLKRFRSLTLGKPILMGRKTAQS
LGRALPGRVNLVLTRSGQVPFEGMHAVASVEQAIERAAQDGAQELCVIGG
GEVYRLTMQRADLLAVTEVDTVVDGADTHFPPIDPALWEAVQRESHAADA
RHAFAFDYVDYRRR

    






    

        
            
                X.species
            
                
        
NP_641196.1 lcl|folA-XAC0844

        
1

	
164

	
S=770 I=90 E=1.33243e-86

	
dihydrofolate reductase type III

     	

   





    

        
            
                X.species
            
                
        
YP_362628.1 lcl|folA-XCV0897

        
1

	
164

	
S=705 I=82 E=9.84013e-79

	
dihydrofolate reductase

     	

   





    

        
            
                X.species
            
                
        
NP_636179.1 lcl|folA-XCC0788

        
1

	
164

	
S=703 I=80 E=1.5757e-78

	
dihydrofolate reductase type III

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_2767

        
1

	
164

	
S=515 I=59 E=9.40372e-56

	
probable dihydrofolate reductase protein

     	

   





    

        
                pubmed
        
        

        
2

	
163

	
S=339 I=44 E=7.31999e-33

	
Dihydrofolate reductase

	
Pubmed 12511515

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
163

	
S=324 I=43 E=4.93619e-31

	
Putative trimethoprim resistance dihydrofolate reductase

	
Pubmed 17307981

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
145

	
S=313 I=43 E=8.32185e-30

	
Dihydrofolate reductase type 3 EC=1.5.1.3 ; Antibiotic resistance Methotrexate NADP One-carbon metabolism Oxidoreductase Plasmid Trimethoprim

	
Pubmed 2840679,6371010

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
145

	
S=301 I=43 E=2.56045e-28

	
Dihydrofolate reductase EC=1.5.1.3 ; Oxidoreductase

	
Pubmed 12949104

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
141

	
S=296 I=38 E=1.03314e-27

	
Dihydrofolate reductase ; Oxidoreductase

	
Pubmed 15561838

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
164

	
S=296 I=36 E=1.05131e-27

	
Dihydrofolate reductase EC=1.5.1.3 ; NADP One-carbon metabolism Oxidoreductase

	
Pubmed 2840350,8969496

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
141

	
S=291 I=37 E=3.75457e-27

	
Dihydrofolate reductase

	
Pubmed 16127079,12270839

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
145

	
S=285 I=42 E=2.32241e-26

	
Trimethoprim-resistance dihydrofolate reductase

	
Pubmed 15715715

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
145

	
S=284 I=42 E=2.86296e-26

	
Trimethoprim-resistance dihydrofolate reductase

	
Pubmed 15715715

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
145

	
S=282 I=42 E=5.80126e-26

	
Dfr23 protein

	
Pubmed 18990526

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
145

	
S=313 I=43 E=5.80491e-30

	
Dihydrofolate reductase type 3 EC=1.5.1.3 ; Antibiotic resistance Methotrexate NADP One-carbon metabolism Oxidoreductase Plasmid Trimethoprim

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
3

	
164

	
S=296 I=36 E=7.3334e-28

	
Dihydrofolate reductase EC=1.5.1.3 ; NADP One-carbon metabolism Oxidoreductase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
139

	
S=292 I=45 E=2.03389e-27

	
Dihydrofolate reductase EC=1.5.1.3 ; Antibiotic resistance NADP One-carbon metabolism Oxidoreductase Trimethoprim

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
143

	
S=281 I=42 E=4.45399e-26

	
Dihydrofolate reductase EC=1.5.1.3 ; Antibiotic resistance NADP One-carbon metabolism Oxidoreductase Trimethoprim

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
3

	
144

	
S=281 I=45 E=4.45399e-26

	
Dihydrofolate reductase EC=1.5.1.3 ; NADP One-carbon metabolism Oxidoreductase

	

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR012259
	[PR00070]
	
14

	
24

	
	
Dihydrofolate reductase

    





    

        Iprscan
        IPR012259
	[PR00070]
	
28

	
36

	
	
Dihydrofolate reductase

    





    

        Iprscan
        IPR012259
	[PR00070]
	
41

	
52

	
	
Dihydrofolate reductase

    





    

        Iprscan
        IPR012259
	[PR00070]
	
94

	
108

	
	
Dihydrofolate reductase

    





    

        Iprscan
        
	[G3DSA:3.40.430.10]
	
2

	
164

	
	
-

    





    

        Iprscan
        IPR012259
	[PTHR11549:SF1]
	
14

	
152

	
	
Dihydrofolate reductase

    





    

        Iprscan
        
	[PTHR11549]
	
14

	
152

	
	
-

    





    

        Iprscan
        IPR001796
	[PF00186]
	
2

	
163

	
	
Dihydrofolate reductase domain

    





    

        Iprscan
        
	[seg]
	
146

	
157

	
	
-

    





    

        
            
                
            
                
        
PDA1L0C1

        
51

	
96

	
S=206 I=87 E=1.98812e-17

    	
    





    

        
            
                
            
                
        
PD000692

        
5

	
50

	
S=173 I=63 E=1.57958e-13

    	
    





    

        
            
                
            
                
        
PDA464Z9

        
51

	
138

	
S=115 I=35 E=1.71344e-06

    	
    





    

        
            
                
            
                
        
PD356639

        
95

	
145

	
S=107 I=45 E=1.66781e-05

    	
    





    

        Iprscan
        
	[SSF53597]
	
1

	
164

	
	
-

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            273 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            79 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                10 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr08500.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr08500.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr08500.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZOpS0U/XFF4834R_chr08500.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    •