3 hits
XFF4834R_chr02980 | purU | XFF4834R_chr02980 | probable formyltetrahydrofolate hydrolase |
XFF4834R_chr07950 | metF | XFF4834R_chr07950 | 5,10-methylenetetrahydrofolate reductase |
XFF4834R_chr08500 | folA | XFF4834R_chr08500 | probable dihydrofolate reductase |
![]() XFF4834R_chr02970 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr02990 |
ID | purU |
AC | XFF4834R_chr02980 |
LT | XFF4834R_chr02980 |
OR | XFF4834R_chr from 345897 to 346748 on strand + |
DE | probable formyltetrahydrofolate hydrolase |
IP | Formyltetrahydrofolate deformylase |
CL | 1.7.17 Formyl-tetrahydrofolate biosynthesis GO:0009257 |
EC | |
GO |
InterPro Biological Process: 'de novo' IMP biosynthetic process (GO:0006189) Biological Process: biosynthetic process (GO:0009058) Biological Process: metabolic process (GO:0008152) Molecular Function: amino acid binding (GO:0016597) Molecular Function: formyltetrahydrofolate deformylase activity (GO:0008864) formyl- and related transferase activity (GO:0016742) Curated |
PM | |
AN | modif du start |
CC | COG: [F] Nucleotide transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by darrasse (20110701) |
MW | 31745.2 Da |
SQ | 283 aa |
........10........20........30........40........50 |
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XFF4834R_chr16780 purN-XFF4834R_chr16780 |
162 |
234 |
S=138 I=42 E=2.51234e-10 |
phosphoribosylglycinamide formyltransferase 1 |
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XFF4834R_chr36920 fmt-XFF4834R_chr36920 |
153 |
232 |
S=96 I=33 E=3.51511e-05 |
10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase |
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NP_640680.1 purU-XAC0324 |
1 |
283 |
S=1376 I=94 E=9.759e-160 |
formyltetrahydrofolate deformylase |
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YP_362064.1 purU-XCV0333 |
1 |
283 |
S=1367 I=93 E=1.20204e-158 |
formyltetrahydrofolate deformylase |
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NP_635705.1 purU-XCC0310 |
1 |
283 |
S=1317 I=89 E=1.33958e-152 |
formyltetrahydrofolate deformylase |
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NP_638139.1 purN-XCC2791 |
94 |
234 |
S=172 I=35 E=7.06911e-14 |
phosphoribosylglycinamide formyltransferase |
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XALc_2128 PurU-XALc_2128 |
94 |
250 |
S=155 I=31 E=9.08758e-12 |
putative phosphoribosylglycinamide formyltransferase protein |
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YP_364837.1 purN-XCV3106 |
158 |
234 |
S=141 I=42 E=3.79378e-10 |
phosphoribosylglycinamide formyltransferase |
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NP_643270.1 purN-XAC2961 |
162 |
234 |
S=139 I=42 E=8.38773e-10 |
phosphoribosylglycinamide formyltransferase |
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NP_639093.1 fmt-XCC3748 |
153 |
232 |
S=102 I=34 E=2.55192e-05 |
methionyl-tRNA formyltransferase |
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XALc_2857 Fmt-XALc_2857 |
160 |
244 |
S=98 I=34 E=7.01618e-05 |
putative methionyl-trna formyltransferase protein |
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6 |
282 |
S=776 I=55 E=1.87274e-85 |
Putative formyltetrahydrofolate deformylase ; Plasmid |
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3 |
283 |
S=749 I=54 E=3.75241e-82 |
Putative 10-formyltetrahydrofolate deformylase |
Pubmed 11422368 |
|
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5 |
283 |
S=733 I=52 E=3.20205e-80 |
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis |
Pubmed 7543100 |
|
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5 |
283 |
S=731 I=52 E=5.26331e-80 |
Putative formyltetrahydrofolate deformylase |
Pubmed 11422368 |
|
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5 |
282 |
S=705 I=50 E=8.48065e-77 |
PurU protein |
Pubmed 10200311 |
|
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5 |
283 |
S=733 I=52 E=2.18166e-80 |
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis |
||
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7 |
282 |
S=653 I=46 E=1.21689e-70 |
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis |
||
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7 |
282 |
S=640 I=48 E=4.19345e-69 |
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis |
||
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7 |
282 |
S=575 I=45 E=2.74105e-61 |
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis |
||
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7 |
282 |
S=575 I=45 E=2.74105e-61 |
Formyltetrahydrofolate deformylase EC=3.5.1.10 ; Hydrolase One-carbon metabolism Purine biosynthesis |
||
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IPR004810 [PR01575] | 7 |
33 |
Formyltetrahydrofolate deformylase |
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IPR004810 [PR01575] | 39 |
51 |
Formyltetrahydrofolate deformylase |
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IPR004810 [PR01575] | 88 |
110 |
Formyltetrahydrofolate deformylase |
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IPR004810 [PR01575] | 110 |
137 |
Formyltetrahydrofolate deformylase |
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IPR004810 [PR01575] | 234 |
256 |
Formyltetrahydrofolate deformylase |
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IPR004810 [PR01575] | 256 |
281 |
Formyltetrahydrofolate deformylase |
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IPR002376 [G3DSA:3.40.50.170] | 87 |
281 |
Formyl transferase, N-terminal |
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IPR004810 [PIRSF036480] | 1 |
283 |
Formyltetrahydrofolate deformylase |
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[PTHR10520:SF7] | 165 |
283 |
- |
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[PTHR10520] | 165 |
283 |
- |
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IPR002376 [PF00551] | 88 |
264 |
Formyl transferase, N-terminal |
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IPR002912 [PF01842] | 5 |
66 |
Amino acid-binding ACT |
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IPR004810 [TIGR00655] | 5 |
282 |
Formyltetrahydrofolate deformylase |
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[seg] | 83 |
93 |
- |
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162 |
275 |
S=243 I=47 E=6.50625e-22 |
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31 |
109 |
S=151 I=42 E=9.21697e-11 |
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108 |
136 |
S=127 I=90 E=6.95556e-08 |
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111 |
147 |
S=123 I=59 E=1.94599e-07 |
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232 |
271 |
S=122 I=68 E=2.3781e-07 |
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6 |
37 |
S=117 I=66 E=1.15236e-06 |
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254 |
282 |
S=105 I=66 E=2.85115e-05 |
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112 |
139 |
S=103 I=71 E=4.64585e-05 |
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112 |
135 |
S=101 I=88 E=8.55303e-05 |
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IPR002376 [SSF53328] | 87 |
283 |
Formyl transferase, N-terminal |
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[SSF55021] | 1 |
88 |
- |
Access unfiltered results
Miscellaneous analyses
![]() XFF4834R_chr07940 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr07960 |
ID | metF |
AC | XFF4834R_chr07950 |
LT | XFF4834R_chr07950 |
OR | XFF4834R_chr from 919838 to 920665 on strand - |
DE | 5,10-methylenetetrahydrofolate reductase |
IP | Methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase |
CL | 1.7.17 Formyl-tetrahydrofolate biosynthesis GO:0009257 |
EC | |
GO |
InterPro Biological Process: methionine biosynthetic process (GO:0009086) Biological Process: oxidation reduction (GO:0055114) Biological Process: methionine metabolic process (GO:0006555) Molecular Function: methylenetetrahydrofolate reductase (NADPH) activity (GO:0004489) Curated
|
PM | |
AN | according to E.coli annotation |
CC | COG: [E] Amino acid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by darrasse (20120320) |
MW | 30306.2 Da |
SQ | 275 aa |
........10........20........30........40........50 |
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NP_641143.1 lcl|metF-XAC0791 |
1 |
275 |
S=1460 I=100 E=5.85676e-170 |
5,10-methylenetetrahydrofolate reductase |
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YP_362573.1 lcl|metF-XCV0842 |
1 |
275 |
S=1449 I=99 E=1.24945e-168 |
5,10-methylenetetrahydrofolate reductase |
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NP_636130.1 lcl|metF-XCC0739 |
1 |
275 |
S=1419 I=96 E=5.88342e-165 |
5,10-methylenetetrahydrofolate reductase |
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1 |
273 |
S=1302 I=86 E=1.00717e-150 |
putative 5,10-methylenetetrahydrofolate reductase protein |
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NP_635709.1 lcl|metF-XCC0314 |
61 |
275 |
S=110 I=27 E=2.15434e-06 |
5,10-methylenetetrahydrofolate reductase |
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NP_640687.1 lcl|metF-XAC0331 |
58 |
211 |
S=98 I=26 E=7.35951e-05 |
5,10-methylenetetrahydrofolate reductase |
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YP_362071.1 lcl|XCV0340 |
55 |
211 |
S=98 I=27 E=7.55454e-05 |
putative 5,10-methylenetetrahydrofolate reductase |
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3 |
273 |
S=812 I=57 E=8.85059e-90 |
Methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Oxidoreductase |
Pubmed 15305924 |
|
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5 |
273 |
S=810 I=56 E=1.36867e-89 |
Methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Oxidoreductase |
Pubmed 18460806 |
|
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32 |
274 |
S=737 I=55 E=9.33714e-81 |
Methylenetetrahydrofolate reductase EC=1.5.1.20 ; FAD Flavoprotein Oxidoreductase Plasmid |
Pubmed 12673061 |
|
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3 |
274 |
S=567 I=40 E=3.54706e-60 |
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase |
Pubmed 2841568 |
|
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3 |
274 |
S=564 I=40 E=8.78345e-60 |
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase |
||
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4 |
274 |
S=555 I=39 E=1.19078e-58 |
Methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Oxidoreductase |
Pubmed 11286884 |
|
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3 |
274 |
S=516 I=38 E=5.70099e-54 |
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase |
Pubmed 16645985 |
|
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2 |
274 |
S=509 I=38 E=4.58063e-53 |
Methylenetetrahydrofolate reductase 1 EC=1.5.1.20 ; Alternative splicing FAD Flavoprotein NAD Oxidoreductase |
Pubmed 10593891 |
|
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5 |
274 |
S=504 I=39 E=1.51243e-52 |
Methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Oxidoreductase |
Pubmed 17981978 |
|
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2 |
274 |
S=496 I=36 E=1.43415e-51 |
Methylenetetrahydrofolate reductase 2 EC=1.5.1.20 ; FAD Flavoprotein NAD Oxidoreductase |
Pubmed 10593891 |
|
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4 |
273 |
S=596 I=41 E=7.88968e-64 |
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase |
||
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3 |
274 |
S=571 I=40 E=9.45122e-61 |
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase |
||
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3 |
274 |
S=567 I=40 E=2.44465e-60 |
5,10-methylenetetrahydrofolate reductase EC=1.5.1.20 ; Amino-acid biosynthesis FAD Flavoprotein Methionine NAD NADP Oxidoreductase |
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[G3DSA:3.20.20.220] | 2 |
275 |
- |
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[PTHR21091] | 67 |
275 |
- |
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[PTHR21091] | 67 |
275 |
- |
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[PTHR21091:SF1] | 67 |
275 |
- |
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IPR003171 [PF02219] | 1 |
274 |
Methylenetetrahydrofolate reductase |
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IPR004620 [TIGR00676] | 4 |
274 |
5,10-methylenetetrahydrofolate reductase |
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3 |
274 |
S=694 I=52 E=1.22612e-76 |
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[SSF51730] | 4 |
274 |
- |
Access unfiltered results
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Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
34 hits |
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Swiss-Prot ncbi-blastp |
24 hits |
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Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
0 hits |
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HAMAP scan |
0 hits |
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IprScan |
7 hits |
Miscellaneous analyses
![]() XFF4834R_chr08490 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
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![]() XFF4834R_chr08510 |
ID | folA |
AC | XFF4834R_chr08500 |
LT | XFF4834R_chr08500 |
OR | XFF4834R_chr from 986707 to 987201 on strand + |
DE | probable dihydrofolate reductase |
IP | Dihydrofolate reductase region |
CL | 1.7.17 Formyl-tetrahydrofolate biosynthesis GO:0009257 |
EC | |
GO |
InterPro Biological Process: nucleotide biosynthetic process (GO:0009165) Biological Process: oxidation reduction (GO:0055114) Biological Process: glycine biosynthetic process (GO:0006545) Molecular Function: NADP or NADPH binding (GO:0050661) Molecular Function: dihydrofolate reductase activity (GO:0004146) Curated
|
PM | |
AN | |
CC | COG: [H] Coenzyme transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by pieretti (20100330) |
MW | 18194.6 Da |
SQ | 164 aa |
........10........20........30........40........50 |
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NP_641196.1 lcl|folA-XAC0844 |
1 |
164 |
S=770 I=90 E=1.33243e-86 |
dihydrofolate reductase type III |
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YP_362628.1 lcl|folA-XCV0897 |
1 |
164 |
S=705 I=82 E=9.84013e-79 |
dihydrofolate reductase |
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NP_636179.1 lcl|folA-XCC0788 |
1 |
164 |
S=703 I=80 E=1.5757e-78 |
dihydrofolate reductase type III |
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1 |
164 |
S=515 I=59 E=9.40372e-56 |
probable dihydrofolate reductase protein |
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2 |
163 |
S=339 I=44 E=7.31999e-33 |
Dihydrofolate reductase |
Pubmed 12511515 |
|
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2 |
163 |
S=324 I=43 E=4.93619e-31 |
Putative trimethoprim resistance dihydrofolate reductase |
Pubmed 17307981 |
|
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1 |
145 |
S=313 I=43 E=8.32185e-30 |
Dihydrofolate reductase type 3 EC=1.5.1.3 ; Antibiotic resistance Methotrexate NADP One-carbon metabolism Oxidoreductase Plasmid Trimethoprim |
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1 |
145 |
S=301 I=43 E=2.56045e-28 |
Dihydrofolate reductase EC=1.5.1.3 ; Oxidoreductase |
Pubmed 12949104 |
|
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1 |
141 |
S=296 I=38 E=1.03314e-27 |
Dihydrofolate reductase ; Oxidoreductase |
Pubmed 15561838 |
|
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3 |
164 |
S=296 I=36 E=1.05131e-27 |
Dihydrofolate reductase EC=1.5.1.3 ; NADP One-carbon metabolism Oxidoreductase |
||
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1 |
141 |
S=291 I=37 E=3.75457e-27 |
Dihydrofolate reductase |
||
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1 |
145 |
S=285 I=42 E=2.32241e-26 |
Trimethoprim-resistance dihydrofolate reductase |
Pubmed 15715715 |
|
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1 |
145 |
S=284 I=42 E=2.86296e-26 |
Trimethoprim-resistance dihydrofolate reductase |
Pubmed 15715715 |
|
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1 |
145 |
S=282 I=42 E=5.80126e-26 |
Dfr23 protein |
Pubmed 18990526 |
|
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1 |
145 |
S=313 I=43 E=5.80491e-30 |
Dihydrofolate reductase type 3 EC=1.5.1.3 ; Antibiotic resistance Methotrexate NADP One-carbon metabolism Oxidoreductase Plasmid Trimethoprim |
||
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3 |
164 |
S=296 I=36 E=7.3334e-28 |
Dihydrofolate reductase EC=1.5.1.3 ; NADP One-carbon metabolism Oxidoreductase |
||
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1 |
139 |
S=292 I=45 E=2.03389e-27 |
Dihydrofolate reductase EC=1.5.1.3 ; Antibiotic resistance NADP One-carbon metabolism Oxidoreductase Trimethoprim |
||
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1 |
143 |
S=281 I=42 E=4.45399e-26 |
Dihydrofolate reductase EC=1.5.1.3 ; Antibiotic resistance NADP One-carbon metabolism Oxidoreductase Trimethoprim |
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3 |
144 |
S=281 I=45 E=4.45399e-26 |
Dihydrofolate reductase EC=1.5.1.3 ; NADP One-carbon metabolism Oxidoreductase |
||
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IPR012259 [PR00070] | 14 |
24 |
Dihydrofolate reductase |
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IPR012259 [PR00070] | 28 |
36 |
Dihydrofolate reductase |
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IPR012259 [PR00070] | 41 |
52 |
Dihydrofolate reductase |
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IPR012259 [PR00070] | 94 |
108 |
Dihydrofolate reductase |
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[G3DSA:3.40.430.10] | 2 |
164 |
- |
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IPR012259 [PTHR11549:SF1] | 14 |
152 |
Dihydrofolate reductase |
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[PTHR11549] | 14 |
152 |
- |
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IPR001796 [PF00186] | 2 |
163 |
Dihydrofolate reductase domain |
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[seg] | 146 |
157 |
- |
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51 |
96 |
S=206 I=87 E=1.98812e-17 |
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5 |
50 |
S=173 I=63 E=1.57958e-13 |
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51 |
138 |
S=115 I=35 E=1.71344e-06 |
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95 |
145 |
S=107 I=45 E=1.66781e-05 |
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[SSF53597] | 1 |
164 |
- |
Access unfiltered results
Miscellaneous analyses