7 hits
XFF4834R_chr02210 | iaaA | XFF4834R_chr02210 | Asparaginase |
XFF4834R_chr15380 | XFF4834R_chr16530939_1772342_f3_XFF4834R-XFF4834R_chr15380 | XFF4834R_chr15380 | putative asparaginase |
XFF4834R_chr19310 | XFF4834R_chr_2211526_2212230_r1_XFF4834R-XFF4834R_chr19310 | XFF4834R_chr19310 | putative Asp/Glu racemase |
XFF4834R_chr23510 | argC | XFF4834R_chr23510 | N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding |
XFF4834R_chr23570 | argF | XFF4834R_chr23570 | N-acetyl ornithine carbamoyltransferase |
XFF4834R_chr23700 | eutB | XFF4834R_chr23700 | ethanolamine ammonia-lyase, large subunit, heavy chain |
XFF4834R_chr23710 | eutC | XFF4834R_chr23710 | ethanolamine ammonia-lyase, small subunit (light chain) |
![]() XFF4834R_chr02200 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr02220 |
ID | iaaA |
AC | XFF4834R_chr02210 |
LT | XFF4834R_chr02210 |
OR | XFF4834R_chr from 257453 to 258463 on strand + |
DE | Asparaginase |
IP | Peptidase T2, asparaginase 2 |
CL | 1.7.13 Amino acid conversion GO:0006520 |
EC | |
GO |
InterPro Molecular Function: hydrolase activity (GO:0016787) Curated
|
PM | |
AN | |
CC | COG: [E] Amino acid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by darrasse (20120320) |
MW | 34971.4 Da |
SQ | 336 aa |
........10........20........30........40........50 |
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XFF4834R_chr15380 lcl|XFF4834R_chr16530939_1772342_f3_XFF4834R-XFF4834R_chr15380 |
62 |
284 |
S=321 I=38 E=2.06623e-32 |
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NP_640604.1 lcl|ansA-XAC0248 |
28 |
336 |
S=1490 I=93 E=2.02303e-173 |
asparaginase |
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YP_361985.1 lcl|XCV0254 |
25 |
336 |
S=1456 I=90 E=2.80826e-169 |
asparaginase precursor |
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NP_635624.1 lcl|ansA-XCC0229 |
28 |
336 |
S=1451 I=91 E=1.13313e-168 |
asparaginase |
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NP_638262.2 lcl|aspG-XCC2914 |
62 |
284 |
S=326 I=39 E=2.12231e-32 |
asparaginase |
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YP_364953.1 lcl|XCV3222 |
62 |
288 |
S=325 I=39 E=2.6623e-32 |
asparaginase precursor |
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NP_643401.2 lcl|aspG-XAC3092 |
62 |
288 |
S=321 I=39 E=8.41542e-32 |
asparaginase |
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62 |
284 |
S=314 I=38 E=6.76161e-31 |
putative asparaginase protein |
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29 |
334 |
S=708 I=50 E=4.00868e-77 |
Putative asparaginase |
Pubmed 16672512 |
|
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28 |
333 |
S=675 I=48 E=3.56719e-73 |
Isoaspartyl peptidase EC=3.4.19.5 ; Autocatalytic cleavage Hydrolase Protease |
Pubmed 11325937 |
|
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28 |
335 |
S=612 I=44 E=1.54777e-65 |
Putative asparaginase |
||
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29 |
334 |
S=558 I=40 E=5.35798e-59 |
Isoaspartyl peptidase/L-asparaginase 1 EC=3.4.19.5 ; Alternative splicing Autocatalytic cleavage Hydrolase Protease |
Pubmed 7630960 |
|
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29 |
331 |
S=556 I=40 E=9.69357e-59 |
Isoaspartyl peptidase/L-asparaginase EC=3.4.19.5 ; Autocatalytic cleavage Hydrolase Protease |
||
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29 |
331 |
S=555 I=40 E=1.30384e-58 |
Isoaspartyl peptidase/L-asparaginase EC=3.4.19.5 ; Autocatalytic cleavage Hydrolase Protease |
Pubmed 1391778 |
|
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49 |
331 |
S=543 I=41 E=3.74136e-57 |
Isoaspartyl peptidase/L-asparaginase EC=3.4.19.5 ; Autocatalytic cleavage Hydrolase Protease |
Pubmed 1377963 |
|
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29 |
332 |
S=513 I=37 E=1.82425e-53 |
L-asparaginase 2 EC=3.5.1.1 ; Hydrolase |
Pubmed 16705405 |
|
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28 |
258 |
S=454 I=45 E=2.23575e-46 |
L-asparaginase EC=3.5.1.1 ; Cytoplasm Hydrolase |
||
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26 |
335 |
S=447 I=37 E=1.87642e-45 |
L-asparaginase EC=3.5.1.1 ; Alternative splicing Cytoplasm Hydrolase |
||
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28 |
334 |
S=684 I=47 E=2.12015e-74 |
Isoaspartyl peptidase EC=3.4.19.5 ; Autocatalytic cleavage Hydrolase Protease |
||
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28 |
333 |
S=675 I=48 E=2.45682e-73 |
Isoaspartyl peptidase EC=3.4.19.5 ; Autocatalytic cleavage Hydrolase Protease |
||
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29 |
331 |
S=560 I=39 E=2.51445e-59 |
Isoaspartyl peptidase/L-asparaginase EC=3.4.19.5 ; Autocatalytic cleavage Hydrolase Protease |
||
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IPR000246 [PF01112] | 25 |
335 |
Peptidase T2, asparaginase 2 |
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[seg] | 3 |
24 |
- |
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[seg] | 291 |
304 |
- |
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[tmhmm] | 9 |
31 |
- |
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52 |
319 |
S=640 I=51 E=4.57528e-70 |
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139 |
245 |
S=277 I=49 E=3.86957e-26 |
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29 |
177 |
S=178 I=31 E=3.69968e-14 |
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28 |
238 |
S=165 I=29 E=1.69997e-12 |
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27 |
144 |
S=156 I=33 E=1.82125e-11 |
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264 |
333 |
S=117 I=37 E=9.26819e-07 |
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258 |
329 |
S=106 I=31 E=2.37452e-05 |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
21 hits |
![]() |
Swiss-Prot ncbi-blastp |
39 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
1 hits |
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HAMAP scan |
0 hits |
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IprScan |
4 hits |
Miscellaneous analyses
![]() XFF4834R_chr15370 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr15390 |
ID | XFF4834R_chr16530939_1772342_f3_XFF4834R-XFF4834R_chr15380 |
AC | XFF4834R_chr15380 |
LT | XFF4834R_chr15380 |
OR | XFF4834R_chr from 1770939 to 1772342 on strand + |
DE | putative asparaginase |
IP | Peptidase T2, asparaginase 2; Twin-arginine translocation pathway, signal sequence |
CL | 1.7.13 Amino acid conversion GO:0006520 |
EC | |
GO |
InterPro Molecular Function: hydrolase activity (GO:0016787) Curated
|
PM | |
AN | classification according to GenProtEC for asparaginase |
CC | COG: [E] Amino acid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by darrasse (20120402) |
MW | 50312.1 Da |
SQ | 467 aa |
........10........20........30........40........50 |
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XFF4834R_chr02210 lcl|iaaA-XFF4834R_chr02210 |
179 |
406 |
S=321 I=38 E=3.68603e-32 |
L-asparaginase |
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YP_364953.1 lcl|XCV3222 |
114 |
467 |
S=1731 I=93 E=0 |
asparaginase precursor |
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NP_643401.2 lcl|aspG-XAC3092 |
114 |
467 |
S=1730 I=93 E=0 |
asparaginase |
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NP_638262.2 lcl|aspG-XCC2914 |
114 |
467 |
S=1638 I=88 E=0 |
asparaginase |
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114 |
467 |
S=1461 I=79 E=9.73469e-170 |
putative asparaginase protein |
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NP_635624.1 lcl|ansA-XCC0229 |
179 |
406 |
S=327 I=39 E=2.34583e-32 |
asparaginase |
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NP_640604.1 lcl|ansA-XAC0248 |
179 |
406 |
S=321 I=38 E=1.4013e-31 |
asparaginase |
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YP_361985.1 lcl|XCV0254 |
179 |
406 |
S=318 I=39 E=2.64817e-31 |
asparaginase precursor |
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NP_643403.1 lcl|XAC3094-XAC3094 |
34 |
76 |
S=147 I=72 E=1.58306e-10 |
hypothetical protein |
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162 |
457 |
S=955 I=62 E=7.93071e-107 |
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase EC=3.5.1.26 ; Hydrolase Periplasm Signal |
||
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162 |
455 |
S=502 I=41 E=4.94113e-52 |
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase EC=3.5.1.26 ; Disulfide bond Glycoprotein Hydrolase Lysosome |
Pubmed 8877373 |
|
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162 |
451 |
S=407 I=36 E=2.01025e-40 |
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase EC=3.5.1.26 ; Disease mutation Disulfide bond Glycoprotein Hydrolase Lysosome Polymorphism Signal |
||
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162 |
415 |
S=384 I=41 E=1.27428e-37 |
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase EC=3.5.1.26 ; Disulfide bond Glycoprotein Hydrolase Lysosome Signal |
Pubmed 2775174 |
|
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162 |
415 |
S=380 I=40 E=3.69163e-37 |
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase EC=3.5.1.26 ; Disulfide bond Glycoprotein Hydrolase Lysosome Signal |
Pubmed 8586423 |
|
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174 |
432 |
S=367 I=38 E=1.376e-35 |
Isoaspartyl peptidase EC=3.4.19.5 ; Autocatalytic cleavage Hydrolase Protease |
Pubmed 11325937 |
|
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169 |
431 |
S=346 I=38 E=4.53569e-33 |
L-asparaginase EC=3.5.1.1 ; Cytoplasm Hydrolase |
||
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187 |
432 |
S=317 I=35 E=1.28806e-29 |
Isoaspartyl peptidase/L-asparaginase EC=3.4.19.5 ; Autocatalytic cleavage Hydrolase Protease |
||
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171 |
459 |
S=303 I=34 E=8.10076e-28 |
Putative asparaginase |
||
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177 |
400 |
S=298 I=38 E=2.89305e-27 |
L-asparaginase EC=3.5.1.1 ; Alternative splicing Cytoplasm Hydrolase |
||
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162 |
457 |
S=955 I=62 E=5.45744e-107 |
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase EC=3.5.1.26 ; Hydrolase Periplasm Signal |
||
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162 |
455 |
S=502 I=41 E=3.40019e-52 |
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase EC=3.5.1.26 ; Disulfide bond Glycoprotein Hydrolase Lysosome |
||
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IPR000246 [PF01112] | 162 |
441 |
Peptidase T2, asparaginase 2 |
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IPR006311 [TIGR01409] | 115 |
140 |
Twin-arginine translocation pathway, signal sequence |
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[seg] | 132 |
149 |
- |
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164 |
457 |
S=502 I=43 E=2.91377e-53 |
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68 |
113 |
S=169 I=67 E=5.51454e-13 |
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256 |
365 |
S=147 I=35 E=2.64457e-10 |
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34 |
76 |
S=147 I=72 E=3.04046e-10 |
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114 |
163 |
S=120 I=58 E=5.29892e-07 |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
21 hits |
![]() |
Swiss-Prot ncbi-blastp |
38 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
1 hits |
![]() |
HAMAP scan |
0 hits |
![]() |
IprScan |
3 hits |
Miscellaneous analyses
![]() XFF4834R_chr_4662 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
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![]() XFF4834R_chr19320 |
ID | XFF4834R_chr_2211526_2212230_r1_XFF4834R-XFF4834R_chr19310 |
AC | XFF4834R_chr19310 |
LT | XFF4834R_chr19310 |
OR | XFF4834R_chr from 2211526 to 2212230 on strand - |
DE | putative Asp/Glu racemase |
IP | Aspartate racemase; Asp/Glu/hydantoin racemase |
CL | 1.7.13 Amino acid conversion GO:0006520 |
EC | |
GO |
InterPro Biological Process: cellular amino acid metabolic process (GO:0006520) Biological Process: metabolic process (GO:0008152) acting on amino acids and derivatives (GO:0016855) Curated |
PM | |
AN | CL: also 1.6.7 Peptidoglycan (murein) : Aspartate racemase (EC:5.1.1.13) and glutamate racemase (EC:5.1.1.3) are two evolutionary related bacterial enzymes that do not seem to require a cofactor for their activity [1]. Glutamate racemase, which interconverts L-glutamate into D-glutamate, is required for the biosynthesis of peptidoglycan and some peptide-based antibiotics such as gramicidin S. |
CC | COG: [M] Cell wall/membrane/envelope biogenesis; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by irobene (20100825) |
MW | 25068.6 Da |
SQ | 234 aa |
........10........20........30........40........50 |
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YP_363563.1 XCV1832 |
1 |
220 |
S=961 I=83 E=1.35195e-109 |
putative aspartate racemase |
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NP_642129.1 ygeA-XAC1802 |
1 |
220 |
S=947 I=83 E=7.26766e-108 |
putative resistance protein |
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NP_637151.1 ygeA-XCC1785 |
1 |
220 |
S=916 I=79 E=3.73396e-104 |
putative resistance protein |
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7 |
219 |
S=549 I=49 E=5.44101e-58 |
Uncharacterized protein ygeA ; Isomerase |
||
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8 |
220 |
S=472 I=44 E=9.68526e-49 |
Aspartate racemase |
||
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8 |
220 |
S=269 I=30 E=4.07149e-24 |
Putative aminoacid racemase Orfc372-4 |
Pubmed 12618374 |
|
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30 |
170 |
S=217 I=33 E=9.03516e-18 |
LysA activator protein |
Pubmed 9020051 |
|
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81 |
218 |
S=178 I=28 E=3.96452e-13 |
228aa long hypothetical aspartate racemase |
Pubmed 12051922 |
|
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7 |
219 |
S=549 I=49 E=3.71278e-58 |
Uncharacterized protein ygeA ; Isomerase |
||
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81 |
218 |
S=145 I=26 E=2.81639e-09 |
Aspartate racemase EC=5.1.1.13 ; Isomerase |
||
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8 |
220 |
S=131 I=23 E=1.47491e-07 |
Probable amino-acid racemase EC=5.1.1.- ; Cell shape wall biogenesis/degradation Isomerase Peptidoglycan synthesis Sporulation |
||
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IPR001920 [G3DSA:3.40.50.1860] | 110 |
234 |
Asp/Glu racemase |
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IPR015942 [PF01177] | 11 |
227 |
Asp/Glu/hydantoin racemase |
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IPR004380 [TIGR00035] | 4 |
234 |
Aspartate racemase |
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IPR018187 [PS00924] | 196 |
206 |
Asp/Glu racemase, active site |
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[seg] | 63 |
80 |
- |
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[seg] | 109 |
119 |
- |
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[seg] | 221 |
233 |
- |
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124 |
179 |
S=201 I=63 E=6.09043e-17 |
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35 |
124 |
S=183 I=44 E=9.73629e-15 |
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120 |
218 |
S=117 I=24 E=1.11193e-06 |
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8 |
35 |
S=106 I=68 E=2.49953e-05 |
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91 |
220 |
S=105 I=28 E=3.10829e-05 |
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IPR001920 [SSF53681] | 5 |
120 |
Asp/Glu racemase |
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IPR001920 [SSF53681] | 108 |
219 |
Asp/Glu racemase |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
13 hits |
![]() |
Swiss-Prot ncbi-blastp |
3 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
0 hits |
![]() |
HAMAP scan |
0 hits |
![]() |
IprScan |
9 hits |
Miscellaneous analyses
![]() XFF4834R_chr23500 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr23520 |
ID | argC |
AC | XFF4834R_chr23510 |
LT | XFF4834R_chr23510 |
OR | XFF4834R_chr from 2721861 to 2722811 on strand - |
DE | N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding |
IP | Semialdehyde dehydrogenase, NAD-binding; N-acetyl-gamma-glutamyl-phosphate reductase; Semialdehyde dehydrogenase, dimerisation region |
CL | 1.7.13 Amino acid conversion GO:0006520 |
EC | |
GO |
InterPro Biological Process: cellular amino acid metabolic process (GO:0006520) Biological Process: arginine biosynthetic process (GO:0006526) Biological Process: cellular amino acid biosynthetic process (GO:0008652) Cellular Component: cytoplasm (GO:0005737) Molecular Function: N-acetyl-gamma-glutamyl-phosphate reductase activity (GO:0003942) Molecular Function: protein dimerization activity (GO:0046983) Molecular Function: NAD or NADH binding (GO:0051287) NAD or NADP as acceptor (GO:0016620) Curated |
PM | |
AN | |
CC | COG: [E] Amino acid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by jacques (20110221) |
MW | 34213.8 Da |
SQ | 316 aa |
........10........20........30........40........50 |
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ARGC_MF_00150 | raw_score=5367 norm_score=30.789 | N-acetyl-gamma-glutamyl-phosphate reductase [argC]. |
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NP_642662.1 lcl|argC-XAC2346 |
1 |
316 |
S=1556 I=93 E=0 |
N-acetyl-gamma-glutamyl-phosphate reductase |
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YP_364276.1 lcl|argC-XCV2545 |
1 |
316 |
S=1517 I=91 E=8.46478e-177 |
N-acetyl-gamma-glutamyl-phosphate reductase |
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NP_637598.1 lcl|argC-XCC2243 |
1 |
315 |
S=1417 I=84 E=1.09811e-164 |
N-acetyl-gamma-glutamyl-phosphate reductase |
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1 |
315 |
S=1258 I=73 E=2.51794e-145 |
probable n-acetyl-gamma-glutamyl phosphate reductase, nad(p)-binding protein |
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4 |
315 |
S=800 I=50 E=2.68683e-88 |
Protein arg-6, mitochondrial EC=1.2.1.38 EC=2.7.2.8 ; Amino-acid biosynthesis Arginine ATP-binding Kinase Mitochondrion Multifunctional enzyme |
Pubmed 7907589 |
|
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4 |
315 |
S=779 I=50 E=1.04523e-85 |
Protein ARG5,6, mitochondrial EC=1.2.1.38 EC=2.7.2.8 ; Amino-acid biosynthesis Arginine ATP-binding Kinase Mitochondrion Multifunctional enzyme NADP |
Pubmed 9043106 |
|
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1 |
315 |
S=767 I=46 E=2.70132e-84 |
Protein arg11, mitochondrial EC=1.2.1.38 EC=2.7.2.8 ; Amino-acid biosynthesis Arginine ATP-binding Cleavage pair of basic residues Kinase Mi |
Pubmed 1313366 |
|
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1 |
315 |
S=722 I=46 E=7.08052e-79 |
Protein ARG5,6, mitochondrial EC=1.2.1.38 EC=2.7.2.8 ; Amino-acid biosynthesis Arginine ATP-binding Kinase Mitochondrion Multifunctional enzyme |
Pubmed 1851947 |
|
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8 |
311 |
S=407 I=34 E=9.80687e-41 |
N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 ; Amino-acid biosynthesis Arginine Cytoplasm NADP Oxidoreductase |
Pubmed 16857943 |
|
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8 |
315 |
S=371 I=30 E=2.78266e-36 |
N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 ; Amino-acid biosynthesis Arginine Cytoplasm NADP Oxidoreductase |
Pubmed 17563350 |
|
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9 |
304 |
S=340 I=33 E=1.29892e-32 |
N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 ; Amino-acid biosynthesis Arginine Cytoplasm NADP Oxidoreductase |
Pubmed 19077236 |
|
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10 |
315 |
S=338 I=32 E=2.63203e-32 |
N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 ; Amino-acid biosynthesis Arginine Cytoplasm NADP Oxidoreductase |
Pubmed 18441057 |
|
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10 |
311 |
S=320 I=30 E=4.06341e-30 |
N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 ; Amino-acid biosynthesis Arginine Cytoplasm NADP Oxidoreductase |
Pubmed 8180696 |
|
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8 |
311 |
S=318 I=30 E=7.28763e-30 |
N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 ; Amino-acid biosynthesis Arginine Cytoplasm NADP Oxidoreductase |
Pubmed 10931207 |
|
![]() |
1 |
316 |
S=1556 I=93 E=4.19158e-180 |
N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 ; Amino-acid biosynthesis Arginine Cytoplasm NADP Oxidoreductase |
||
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1 |
316 |
S=1517 I=91 E=2.20876e-175 |
N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 ; Amino-acid biosynthesis Arginine Cytoplasm NADP Oxidoreductase |
||
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1 |
315 |
S=1479 I=89 E=1.03017e-170 |
N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 ; Amino-acid biosynthesis Arginine Cytoplasm NADP Oxidoreductase |
||
![]() |
1 |
315 |
S=1429 I=85 E=1.23098e-164 |
N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 ; Amino-acid biosynthesis Arginine Cytoplasm NADP Oxidoreductase |
||
![]() |
1 |
315 |
S=1417 I=84 E=2.86536e-163 |
N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 ; Amino-acid biosynthesis Arginine Cytoplasm NADP Oxidoreductase |
||
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[MF_00150] | 6 |
316 |
- |
![]() |
IPR000534 [PF01118] | 7 |
128 |
Semialdehyde dehydrogenase, NAD-binding |
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IPR012280 [PF02774] | 145 |
293 |
Semialdehyde dehydrogenase, dimerisation region |
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IPR000534 [SM00859] | 7 |
128 |
Semialdehyde dehydrogenase, NAD-binding |
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IPR000706 [TIGR01850] | 6 |
316 |
N-acetyl-gamma-glutamyl-phosphate reductase |
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IPR000706 [PS01224] | 131 |
147 |
N-acetyl-gamma-glutamyl-phosphate reductase |
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[seg] | 62 |
79 |
- |
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162 |
315 |
S=252 I=39 E=5.10783e-23 |
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33 |
85 |
S=140 I=57 E=1.59713e-09 |
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86 |
118 |
S=124 I=67 E=1.36288e-07 |
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100 |
155 |
S=115 I=39 E=2.01599e-06 |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
44 hits |
![]() |
Swiss-Prot ncbi-blastp |
0 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
0 hits |
![]() |
HAMAP scan |
1 hits |
![]() |
IprScan |
7 hits |
Miscellaneous analyses
![]() XFF4834R_chr23560 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr23580 |
ID | argF |
AC | XFF4834R_chr23570 |
LT | XFF4834R_chr23570 |
OR | XFF4834R_chr from 2727925 to 2728950 on strand - |
DE | N-acetyl ornithine carbamoyltransferase |
IP | Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding |
CL | 1.7.13 Amino acid conversion GO:0006520 |
EC | |
GO |
InterPro Biological Process: cellular amino acid metabolic process (GO:0006520) Molecular Function: carboxyl- or carbamoyltransferase activity (GO:0016743) Molecular Function: amino acid binding (GO:0016597) Curated |
PM | |
AN | chgt nom cf publi fonctionnel chez Xcc |
CC | COG: [E] Amino acid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by jacques (20110221) |
MW | 38065.1 Da |
SQ | 341 aa |
........10........20........30........40........50 |
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YP_364282.1 lcl|argF-XCV2551 |
1 |
340 |
S=1810 I=98 E=0 |
N-acetylornithine carbamoyltransferase |
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NP_637604.1 lcl|argF-XCC2249 |
1 |
336 |
S=1807 I=99 E=0 |
N-acetylornithine carbamoyltransferase |
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NP_642668.1 lcl|argF-XAC2352 |
1 |
337 |
S=1805 I=99 E=0 |
N-acetylornithine carbamoyltransferase |
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1 |
341 |
S=1754 I=94 E=0 |
probable ornithine carbamoyltransferase, chain f protein |
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3 |
335 |
S=126 I=25 E=3.30765e-08 |
putative aspartate carbamoyltransferase, catalytic subunit protein |
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1 |
336 |
S=1807 I=99 E=0 |
N-acetylornithine carbamoyltransferase EC=2.1.3.9 ; Amino-acid biosynthesis Arginine Cytoplasm |
Pubmed 15731101 |
|
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3 |
334 |
S=476 I=36 E=4.84331e-49 |
N-acetylornithine carbamoyltransferase EC=2.1.3.9 ; Amino-acid biosynthesis Arginine Cytoplasm |
Pubmed 12095263 |
|
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4 |
335 |
S=451 I=38 E=6.3859e-46 |
Ornithine carbamoyltransferase EC=2.1.3.3 ; Amino-acid biosynthesis Arginine Cytoplasm |
||
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3 |
334 |
S=446 I=32 E=2.12696e-45 |
Putative ornithine carbamoyltransferase |
Pubmed 18048332 |
|
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3 |
330 |
S=401 I=34 E=6.75385e-40 |
Ornithine carbamoyltransferase EC=2.1.3.3 ; Amino-acid biosynthesis Arginine Cytoplasm |
Pubmed 17563350 |
|
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3 |
335 |
S=386 I=36 E=3.85913e-38 |
Ornithine carbamoyltransferase, chloroplastic EC=2.1.3.3 ; Amino-acid biosynthesis Arginine Plastid Transit peptide |
Pubmed 10561504 |
|
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36 |
335 |
S=360 I=36 E=5.9012e-35 |
Ornithine carbamoyltransferase EC=2.1.3.3 ; Amino-acid biosynthesis Arginine Cytoplasm |
Pubmed 17350933 |
|
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3 |
336 |
S=356 I=33 E=1.72457e-34 |
Ornithine carbamoyltransferase, chloroplastic EC=2.1.3.3 ; Amino-acid biosynthesis Arginine Plastid Transit peptide |
Pubmed 8914525 |
|
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4 |
337 |
S=352 I=33 E=5.64476e-34 |
Ornithine carbamoyltransferase EC=2.1.3.3 ; Amino-acid biosynthesis Arginine Cytoplasm |
||
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4 |
336 |
S=352 I=31 E=5.89628e-34 |
Ornithine carbamoyltransferase EC=2.1.3.3 Ornithine carbamoyltransferase OOCT1 |
Pubmed 10987149 |
|
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1 |
336 |
S=1807 I=99 E=0 |
N-acetylornithine carbamoyltransferase EC=2.1.3.9 ; Amino-acid biosynthesis Arginine Cytoplasm |
||
![]() |
1 |
337 |
S=1805 I=99 E=0 |
N-acetylornithine carbamoyltransferase EC=2.1.3.9 ; Amino-acid biosynthesis Arginine Cytoplasm |
||
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1 |
336 |
S=1571 I=84 E=0 |
N-acetylornithine carbamoyltransferase EC=2.1.3.9 ; Amino-acid biosynthesis Arginine Cytoplasm |
||
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1 |
336 |
S=1567 I=84 E=0 |
N-acetylornithine carbamoyltransferase EC=2.1.3.9 ; Amino-acid biosynthesis Arginine Cytoplasm |
||
![]() |
3 |
334 |
S=476 I=36 E=3.33515e-49 |
N-acetylornithine carbamoyltransferase EC=2.1.3.9 ; Amino-acid biosynthesis Arginine Cytoplasm |
||
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[G3DSA:3.40.50.1370] | 3 |
149 |
- |
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[G3DSA:3.40.50.1370] | 151 |
336 |
- |
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IPR006132 [PF02729] | 4 |
162 |
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding |
![]() |
IPR006131 [PF00185] | 187 |
333 |
Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region |
![]() |
143 |
261 |
S=359 I=57 E=5.3049e-36 |
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74 |
142 |
S=282 I=75 E=9.86373e-27 |
![]() |
4 |
76 |
S=150 I=41 E=1.05273e-10 |
![]() |
282 |
335 |
S=112 I=42 E=4.12428e-06 |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
120 hits |
![]() |
Swiss-Prot ncbi-blastp |
0 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
0 hits |
![]() |
HAMAP scan |
0 hits |
![]() |
IprScan |
4 hits |
Miscellaneous analyses
![]() XFF4834R_chr23690 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr23710 |
ID | eutB |
AC | XFF4834R_chr23700 |
LT | XFF4834R_chr23700 |
OR | XFF4834R_chr from 2739221 to 2740630 on strand + |
DE | ethanolamine ammonia-lyase, large subunit, heavy chain |
IP | Ethanolamine ammonia lyase large subunit |
CL | 1.7.13 Amino acid conversion GO:0006520 |
EC | |
GO |
InterPro Biological Process: cellular amino acid metabolic process (GO:0006520) Molecular Function: ethanolamine ammonia-lyase activity (GO:0008851) Curated |
PM | |
AN | |
CC | COG: [E] Amino acid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by jacques (20110221) |
MW | 50136.5 Da |
SQ | 469 aa |
........10........20........30........40........50 |
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NP_642681.1 lcl|eutA-XAC2365 |
1 |
469 |
S=2040 I=84 E=0 |
ethanolamine ammonia-lyase large subunit |
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YP_364294.1 lcl|eutA-XCV2563 |
1 |
469 |
S=2013 I=83 E=0 |
ethanolamine ammonia-lyase, large subunit |
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NP_637615.1 lcl|eutA-XCC2260 |
1 |
463 |
S=1854 I=78 E=0 |
ethanolamine ammonia-lyase large subunit |
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4 |
446 |
S=1297 I=57 E=2.41345e-148 |
Riorf58 protein ; Plasmid |
||
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1 |
435 |
S=1279 I=58 E=4.59319e-146 |
Ethanolamine ammonia-lyase large subunit EC=4.3.1.7 |
||
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10 |
456 |
S=970 I=45 E=1.11245e-108 |
Ethanolamine ammonia-lyase heavy chain EC=4.3.1.7 ; Cobalamin Cobalt |
||
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10 |
456 |
S=971 I=45 E=5.69117e-109 |
Ethanolamine ammonia-lyase heavy chain EC=4.3.1.7 ; Cobalt |
||
![]() |
10 |
456 |
S=971 I=45 E=5.69117e-109 |
Ethanolamine ammonia-lyase heavy chain EC=4.3.1.7 ; Cobalt |
||
![]() |
10 |
456 |
S=970 I=45 E=7.65495e-109 |
Ethanolamine ammonia-lyase heavy chain EC=4.3.1.7 ; Cobalamin Cobalt |
||
![]() |
IPR010628 [PIRSF018788] | 2 |
461 |
Ethanolamine ammonia lyase large subunit |
![]() |
IPR010628 [PF06751] | 12 |
456 |
Ethanolamine ammonia lyase large subunit |
![]() |
[seg] | 83 |
90 |
- |
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[seg] | 102 |
120 |
- |
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[seg] | 149 |
162 |
- |
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[seg] | 200 |
207 |
- |
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[seg] | 373 |
389 |
- |
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163 |
424 |
S=1042 I=76 E=1.08617e-118 |
![]() |
34 |
145 |
S=293 I=56 E=5.28073e-28 |
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34 |
82 |
S=170 I=67 E=4.99254e-13 |
![]() |
426 |
464 |
S=121 I=59 E=4.32077e-07 |
![]() |
3 |
33 |
S=112 I=68 E=4.43157e-06 |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
3 hits |
![]() |
Swiss-Prot ncbi-blastp |
3 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
0 hits |
![]() |
HAMAP scan |
0 hits |
![]() |
IprScan |
7 hits |
Miscellaneous analyses
![]() XFF4834R_chr23700 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr23720 |
ID | eutC |
AC | XFF4834R_chr23710 |
LT | XFF4834R_chr23710 |
OR | XFF4834R_chr from 2740627 to 2741442 on strand + |
DE | ethanolamine ammonia-lyase, small subunit (light chain) |
IP | Ethanolamine ammonia-lyase light chain |
CL | 1.7.13 Amino acid conversion GO:0006520 |
EC | |
GO |
InterPro Biological Process: cellular amino acid metabolic process (GO:0006520) Molecular Function: ethanolamine ammonia-lyase activity (GO:0008851) Curated |
PM | |
AN | |
CC | COG: [E] Amino acid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by jacques (20110221) |
MW | 29105.8 Da |
SQ | 271 aa |
........10........20........30........40........50 |
![]() |
EUTC_MF_00601 | raw_score=6492 norm_score=41.323 | Ethanolamine ammonia-lyase light chain [eutC]. |
![]() |
NP_642682.1 lcl|eutC-XAC2366 |
1 |
271 |
S=1249 I=92 E=2.04256e-144 |
ethanolamine ammonia-lyase small subunit |
![]() |
YP_364295.1 lcl|eutC-XCV2564 |
26 |
271 |
S=1076 I=88 E=2.04236e-123 |
ethanolamine ammonia-lyase small subunit |
![]() |
NP_637616.1 lcl|eutC-XCC2261 |
1 |
271 |
S=1061 I=79 E=1.56968e-121 |
ethanolamine ammonia-lyase small subunit |
![]() |
9 |
257 |
S=495 I=48 E=2.09418e-51 |
Riorf57 protein ; Plasmid |
||
![]() |
1 |
258 |
S=385 I=40 E=3.61939e-38 |
Ethanolamine ammonia-lyase light chain EC=4.3.1.7 ; Cobalamin Cobalt |
Pubmed 8069783 |
|
![]() |
10 |
246 |
S=300 I=35 E=8.96585e-28 |
Ethanolamine ammonia-lyase light chain EC=4.3.1.7 ; Cobalamin Cobalt |
||
![]() |
1 |
271 |
S=1249 I=92 E=5.23795e-143 |
Ethanolamine ammonia-lyase light chain EC=4.3.1.7 ; Cobalamin Cobalt |
||
![]() |
1 |
271 |
S=1061 I=79 E=4.02529e-120 |
Ethanolamine ammonia-lyase light chain EC=4.3.1.7 ; Cobalamin Cobalt |
||
![]() |
1 |
271 |
S=1051 I=78 E=5.60173e-119 |
Ethanolamine ammonia-lyase light chain EC=4.3.1.7 ; Cobalamin Cobalt |
||
![]() |
1 |
271 |
S=1051 I=78 E=5.60173e-119 |
Ethanolamine ammonia-lyase light chain EC=4.3.1.7 ; Cobalamin Cobalt |
||
![]() |
3 |
269 |
S=807 I=63 E=1.98704e-89 |
Ethanolamine ammonia-lyase light chain EC=4.3.1.7 ; Cobalamin Cobalt |
||
![]() |
[MF_00601] | 2 |
247 |
- |
![]() |
IPR009246 [PIRSF018982] | 1 |
265 |
Ethanolamine ammonia-lyase light chain |
![]() |
IPR009246 [PF05985] | 5 |
247 |
Ethanolamine ammonia-lyase light chain |
![]() |
[seg] | 90 |
105 |
- |
![]() |
135 |
271 |
S=471 I=71 E=1.35011e-49 |
![]() |
12 |
133 |
S=310 I=56 E=3.91747e-30 |
![]() |
148 |
173 |
S=108 I=81 E=1.3243e-05 |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
3 hits |
![]() |
Swiss-Prot ncbi-blastp |
67 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
0 hits |
![]() |
HAMAP scan |
1 hits |
![]() |
IprScan |
4 hits |
Miscellaneous analyses