5 hits
XFF4834R_chr06430 | dapF | XFF4834R_chr06430 | diaminopimelate epimerase |
XFF4834R_chr20050 | dapB | XFF4834R_chr20050 | dihydrodipicolinate reductase |
XFF4834R_chr25690 | dapA2 | XFF4834R_chr25690 | probable dihydrodipicolinate synthetase |
XFF4834R_chr27200 | asd | XFF4834R_chr27200 | probable aspartate-semialdehyde dehydrogenase |
XFF4834R_chr27520 | dapA1 | XFF4834R_chr27520 | dihydrodipicolinate synthase |
![]() XFF4834R_chr06420 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
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![]() XFF4834R_chr06440 |
ID | dapF |
AC | XFF4834R_chr06430 |
LT | XFF4834R_chr06430 |
OR | XFF4834R_chr from 732597 to 733451 on strand + |
DE | diaminopimelate epimerase |
IP | Diaminopimelate epimerase; Diaminopimelate epimerase, active site |
CL | 1.5.1.7 Lysine, diaminopimelate GO:0009089 |
EC | |
GO |
InterPro Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089) Cellular Component: cytoplasm (GO:0005737) Molecular Function: diaminopimelate epimerase activity (GO:0008837) Curated
|
PM | |
AN | |
CC | COG: [E] Amino acid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by darrasse (20120322) |
MW | 30091.7 Da |
SQ | 284 aa |
........10........20........30........40........50 |
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DAPF_MF_00197 | raw_score=5002 norm_score=35.840 | Diaminopimelate epimerase [dapF]. |
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YP_362420.1 lcl|dapF-XCV0689 |
1 |
284 |
S=1276 I=88 E=1.26108e-147 |
diaminopimelate epimerase |
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NP_640987.1 lcl|dapF-XAC0634 |
15 |
284 |
S=1214 I=89 E=4.068e-140 |
diaminopimelate epimerase |
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NP_638845.1 lcl|dapF-XCC3499 |
1 |
284 |
S=1157 I=80 E=3.39713e-133 |
diaminopimelate epimerase |
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6 |
282 |
S=960 I=67 E=2.8214e-109 |
probable diaminopimelate epimerase protein |
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10 |
281 |
S=505 I=42 E=1.14854e-52 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
Pubmed 7715441 |
|
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10 |
280 |
S=497 I=38 E=1.03358e-51 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
Pubmed 9843410 |
|
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10 |
280 |
S=496 I=39 E=1.65507e-51 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
||
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10 |
281 |
S=487 I=40 E=1.78868e-50 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
Pubmed 9618537 |
|
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6 |
280 |
S=439 I=33 E=1.39423e-44 |
Diaminopimelate epimerase ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
Pubmed 15716086 |
|
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15 |
281 |
S=437 I=40 E=1.99333e-44 |
Diaminopimelate epimerase ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
Pubmed 15305924 |
|
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12 |
281 |
S=384 I=36 E=5.50079e-38 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
Pubmed 18700039 |
|
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10 |
281 |
S=379 I=35 E=2.2586e-37 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
Pubmed 18441057 |
|
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9 |
283 |
S=314 I=33 E=1.7885e-29 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
Pubmed 16857943 |
|
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10 |
282 |
S=311 I=30 E=4.05901e-29 |
Diaminopimelate epimerase 2 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
Pubmed 18226230 |
|
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1 |
284 |
S=1288 I=89 E=1.14324e-147 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
||
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1 |
284 |
S=1276 I=88 E=3.2238e-146 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
||
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1 |
283 |
S=1216 I=85 E=6.90307e-139 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
||
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1 |
284 |
S=1157 I=80 E=8.68438e-132 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
||
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1 |
284 |
S=1157 I=80 E=8.68438e-132 |
Diaminopimelate epimerase EC=5.1.1.7 ; Amino-acid biosynthesis Cytoplasm Isomerase Lysine |
||
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[G3DSA:3.10.310.10] | 124 |
284 |
- |
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[MF_00197] | 10 |
284 |
- |
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IPR001653 [PF01678] | 12 |
109 |
Diaminopimelate epimerase |
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IPR001653 [PF01678] | 161 |
277 |
Diaminopimelate epimerase |
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IPR001653 [TIGR00652] | 10 |
284 |
Diaminopimelate epimerase |
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IPR018510 [PS01326] | 73 |
87 |
Diaminopimelate epimerase, active site |
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[seg] | 32 |
44 |
- |
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[seg] | 225 |
238 |
- |
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92 |
145 |
S=195 I=65 E=4.28081e-16 |
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149 |
281 |
S=189 I=42 E=2.16679e-15 |
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144 |
283 |
S=172 I=21 E=2.33975e-13 |
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12 |
92 |
S=154 I=41 E=3.51892e-11 |
Access unfiltered results
Miscellaneous analyses
![]() XFF4834R_chr20040 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
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![]() XFF4834R_chr20060 |
ID | dapB |
AC | XFF4834R_chr20050 |
LT | XFF4834R_chr20050 |
OR | XFF4834R_chr from 2297698 to 2298414 on strand + |
DE | dihydrodipicolinate reductase |
IP | Dihydrodipicolinate reductase; Dihydrodipicolinate reductase, bacterial/plant; NAD(P)-binding domain |
CL | 1.5.1.7 Lysine, diaminopimelate GO:0009089 |
EC | |
GO |
InterPro Biological Process: oxidation reduction (GO:0055114) Biological Process: metabolic process (GO:0008152) Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089) Cellular Component: cytoplasm (GO:0005737) Molecular Function: dihydrodipicolinate reductase activity (GO:0008839) Molecular Function: catalytic activity (GO:0003824) Molecular Function: binding (GO:0005488) Curated |
PM | |
AN | |
CC | COG: [E] Amino acid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by jacques (20110221) |
MW | 24814.1 Da |
SQ | 238 aa |
........10........20........30........40........50 |
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DAPB_MF_00102 | raw_score=4155 norm_score=28.807 | Dihydrodipicolinate reductase [dapB]. |
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NP_642186.1 lcl|dapB-XAC1860 |
1 |
238 |
S=1110 I=92 E=1.4955e-127 |
dihydrodipicolinate reductase |
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YP_363637.1 lcl|dapB-XCV1906 |
1 |
238 |
S=1105 I=92 E=5.38769e-127 |
dihydrodipicolinate reductase |
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NP_637205.1 lcl|dapB-XCC1840 |
1 |
238 |
S=1044 I=85 E=1.38546e-119 |
dihydrodipicolinate reductase |
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1 |
237 |
S=847 I=71 E=8.93586e-96 |
probable dihydrodipicolinate reductase (dhpr) protein |
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6 |
237 |
S=359 I=40 E=4.71166e-35 |
Dihydrodipicolinate reductase ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
Pubmed 16483680 |
|
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1 |
237 |
S=351 I=37 E=4.70772e-34 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
||
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65 |
237 |
S=332 I=39 E=9.35879e-32 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
Pubmed 19124572 |
|
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7 |
237 |
S=332 I=38 E=9.94775e-32 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
Pubmed 14602651 |
|
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4 |
237 |
S=315 I=29 E=9.34317e-30 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
Pubmed 17038625 |
|
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7 |
237 |
S=312 I=38 E=2.37493e-29 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
Pubmed 8990304 |
|
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6 |
237 |
S=305 I=35 E=1.89164e-28 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
Pubmed 15618402 |
|
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7 |
237 |
S=300 I=37 E=6.9347e-28 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
Pubmed 8169201 |
|
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21 |
238 |
S=289 I=32 E=1.60018e-26 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
Pubmed 15637156 |
|
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6 |
236 |
S=288 I=34 E=2.13365e-26 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
Pubmed 11447207 |
|
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1 |
238 |
S=1110 I=92 E=3.76336e-126 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
||
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1 |
238 |
S=1105 I=92 E=1.35579e-125 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
||
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1 |
238 |
S=1044 I=85 E=3.48644e-118 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
||
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1 |
238 |
S=1044 I=85 E=3.48644e-118 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
||
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1 |
238 |
S=1044 I=85 E=3.48644e-118 |
Dihydrodipicolinate reductase EC=1.3.1.26 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lysine NADP Oxidoreductase |
||
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IPR016040 [G3DSA:3.40.50.720] | 7 |
154 |
NAD(P)-binding domain |
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[MF_00102] | 6 |
238 |
- |
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IPR000846 [PF01113] | 6 |
120 |
Dihydrodipicolinate reductase |
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IPR000846 [PF05173] | 123 |
237 |
Dihydrodipicolinate reductase |
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IPR011770 [TIGR00036] | 5 |
237 |
Dihydrodipicolinate reductase, bacterial/plant |
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IPR000846 [PS01298] | 144 |
161 |
Dihydrodipicolinate reductase |
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[seg] | 97 |
114 |
- |
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4 |
58 |
S=239 I=91 E=1.73944e-21 |
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122 |
238 |
S=209 I=39 E=7.77319e-18 |
Access unfiltered results
Miscellaneous analyses
![]() XFF4834R_chr25680 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr25700 |
ID | dapA2 |
AC | XFF4834R_chr25690 |
LT | XFF4834R_chr25690 |
OR | XFF4834R_chr from 2979363 to 2980271 on strand - |
DE | probable dihydrodipicolinate synthetase |
IP | Dihydrodipicolinate synthetase; Aldolase-type TIM barrel |
CL | 1.5.1.7 Lysine, diaminopimelate GO:0009089 |
EC | |
GO |
InterPro Biological Process: metabolic process (GO:0008152) Molecular Function: catalytic activity (GO:0003824) Molecular Function: lyase activity (GO:0016829) Curated |
PM | |
AN | |
CC | COG: [EM] Amino acid transport and metabolism;Cell wall/membrane/envelope biogenesis; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by darrasse (20110304) |
MW | 31921.7 Da |
SQ | 302 aa |
........10........20........30........40........50 |
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XFF4834R_chr27520 lcl|dapA-XFF4834R_chr27520 |
9 |
296 |
S=295 I=35 E=2.97992e-29 |
dihydrodipicolinate synthase |
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XFF4834R_chr12530 lcl|XFF4834R_chr13180571_1419488_f3_XFF4834R-XFF4834R_chr12530 |
5 |
275 |
S=202 I=29 E=5.87961e-18 |
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XFF4834R_chr27520 lcl|dapA-XFF4834R_chr27520 |
9 |
296 |
S=295 I=35 E=2.97992e-29 |
dihydrodipicolinate synthase |
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XFF4834R_chr12530 lcl|XFF4834R_chr13180571_1419488_f3_XFF4834R-XFF4834R_chr12530 |
5 |
275 |
S=202 I=29 E=5.87961e-18 |
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6 |
298 |
S=340 I=33 E=1.21626e-32 |
Dihydrodipicolinate synthetase ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 3514578 |
|
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9 |
248 |
S=333 I=34 E=9.52014e-32 |
Putative uncharacterized protein |
Pubmed 14680703 |
|
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7 |
246 |
S=325 I=31 E=9.67952e-31 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 17563350 |
|
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7 |
295 |
S=324 I=31 E=1.09362e-30 |
Putative dihidrodipicolinate synthase EC=4.2.1.52 ; Lyase |
Pubmed 11511872 |
|
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6 |
245 |
S=321 I=34 E=2.59256e-30 |
Dihydrodipicolinate synthetas ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 16113328 |
|
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6 |
294 |
S=320 I=28 E=4.11541e-30 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 3514578 |
|
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8 |
275 |
S=319 I=32 E=5.25334e-30 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Lyase |
Pubmed 16329940 |
|
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4 |
265 |
S=313 I=31 E=2.77753e-29 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 18263724 |
|
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6 |
275 |
S=310 I=29 E=5.38806e-29 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 18700039 |
|
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6 |
275 |
S=310 I=29 E=6.52733e-29 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 11447207 |
|
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6 |
247 |
S=391 I=37 E=6.37117e-39 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
||
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6 |
275 |
S=373 I=31 E=8.33442e-37 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
||
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7 |
284 |
S=373 I=29 E=1.0009e-36 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
||
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7 |
284 |
S=373 I=28 E=1.05466e-36 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
||
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7 |
284 |
S=370 I=28 E=2.02814e-36 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
||
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IPR002220 [PR00146] | 40 |
61 |
Dihydrodipicolinate synthetase |
![]() |
IPR002220 [PR00146] | 76 |
94 |
Dihydrodipicolinate synthetase |
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IPR002220 [PR00146] | 133 |
150 |
Dihydrodipicolinate synthetase |
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IPR013785 [G3DSA:3.20.20.70] | 7 |
294 |
Aldolase-type TIM barrel |
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IPR002220 [PTHR12128] | 1 |
296 |
Dihydrodipicolinate synthetase |
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IPR002220 [PF00701] | 8 |
293 |
Dihydrodipicolinate synthetase |
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76 |
218 |
S=146 I=29 E=3.35353e-10 |
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196 |
221 |
S=130 I=100 E=2.64571e-08 |
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133 |
194 |
S=119 I=44 E=5.12806e-07 |
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76 |
134 |
S=106 I=37 E=2.2362e-05 |
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9 |
81 |
S=102 I=34 E=6.36635e-05 |
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132 |
217 |
S=101 I=34 E=8.26963e-05 |
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[SSF51569] | 6 |
294 |
- |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
107 hits |
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Swiss-Prot ncbi-blastp |
0 hits |
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Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
3 hits |
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HAMAP scan |
0 hits |
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IprScan |
7 hits |
Miscellaneous analyses
![]() XFF4834R_chr_2870 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr27210 |
ID | asd |
AC | XFF4834R_chr27200 |
LT | XFF4834R_chr27200 |
OR | XFF4834R_chr from 3135003 to 3136028 on strand - |
DE | probable aspartate-semialdehyde dehydrogenase |
IP | Aspartate-semialdehyde dehydrogenase, conserved site; Aspartate-semialdehyde dehydrogenase, bacterial; NAD(P)-binding domain |
CL | 1.5.1.7 Lysine, diaminopimelate GO:0009089 |
EC | |
GO |
InterPro Biological Process: threonine biosynthetic process (GO:0009088) Biological Process: methionine biosynthetic process (GO:0009086) Biological Process: cellular amino acid biosynthetic process (GO:0008652) Biological Process: metabolic process (GO:0008152) Biological Process: oxidation reduction (GO:0055114) Biological Process: cellular amino acid metabolic process (GO:0006520) Cellular Component: cytoplasm (GO:0005737) Molecular Function: aspartate-semialdehyde dehydrogenase activity (GO:0004073) Molecular Function: catalytic activity (GO:0003824) Molecular Function: binding (GO:0005488) Molecular Function: protein dimerization activity (GO:0046983) Molecular Function: NAD or NADH binding (GO:0051287) Molecular Function: NADP or NADPH binding (GO:0050661) NAD or NADP as acceptor (GO:0016620) Curated |
PM | |
AN | |
CC | COG: [E] Amino acid transport and metabolism; |
CC | MODEL: acur |
CC | STATUS: curated by darrasse (20110302) |
MW | 36585.9 Da |
SQ | 341 aa |
........10........20........30........40........50 |
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5 |
340 |
S=1093 I=61 E=1.04484e-123 |
Aspartate-semialdehyde dehydrogenase |
Pubmed 15003709 |
|
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5 |
340 |
S=1091 I=61 E=1.5334e-123 |
Aspartate-semialdehyde dehydrogenase |
Pubmed 15003709 |
|
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5 |
340 |
S=1090 I=61 E=2.21151e-123 |
Aspartate-semialdehyde dehydrogenase |
Pubmed 15003709 |
|
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5 |
340 |
S=1090 I=61 E=2.21151e-123 |
Aspartate-semialdehyde dehydrogenase |
Pubmed 15003709 |
|
![]() |
5 |
340 |
S=1090 I=61 E=2.21151e-123 |
Aspartate-semialdehyde dehydrogenase |
Pubmed 15003709 |
|
![]() |
5 |
340 |
S=1090 I=61 E=2.21151e-123 |
Aspartate-semialdehyde dehydrogenase |
Pubmed 15003709 |
|
![]() |
5 |
340 |
S=1090 I=61 E=2.21151e-123 |
Aspartate-semialdehyde dehydrogenase |
Pubmed 15003709 |
|
![]() |
5 |
340 |
S=1090 I=61 E=2.21151e-123 |
Aspartate-semialdehyde dehydrogenase |
Pubmed 15003709 |
|
![]() |
5 |
340 |
S=1090 I=61 E=2.21151e-123 |
Aspartate-semialdehyde dehydrogenase |
Pubmed 15003709 |
|
![]() |
5 |
340 |
S=1090 I=61 E=2.21151e-123 |
Aspartate-semialdehyde dehydrogenase |
Pubmed 15003709 |
|
![]() |
5 |
340 |
S=1061 I=60 E=4.67771e-120 |
Aspartate-semialdehyde dehydrogenase EC=1.2.1.11 ; Amino-acid biosynthesis Diaminopimelate Lysine NADP Oxidoreductase |
||
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5 |
340 |
S=1009 I=57 E=8.49428e-114 |
Aspartate-semialdehyde dehydrogenase EC=1.2.1.11 ; Amino-acid biosynthesis Diaminopimelate Lysine NADP Oxidoreductase |
||
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5 |
340 |
S=1006 I=56 E=2.1404e-113 |
Aspartate-semialdehyde dehydrogenase EC=1.2.1.11 ; Amino-acid biosynthesis Diaminopimelate Lysine NADP Oxidoreductase |
||
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5 |
340 |
S=961 I=57 E=5.96335e-108 |
Aspartate-semialdehyde dehydrogenase EC=1.2.1.11 ; Amino-acid biosynthesis Diaminopimelate Lysine NADP Oxidoreductase |
||
![]() |
22 |
341 |
S=897 I=55 E=3.4201e-100 |
Aspartate-semialdehyde dehydrogenase EC=1.2.1.11 ; Amino-acid biosynthesis Diaminopimelate Lysine NADP Oxidoreductase |
||
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[G3DSA:3.30.360.10] | 133 |
338 |
- |
![]() |
IPR012080 [PIRSF000148] | 4 |
341 |
Aspartate-semialdehyde dehydrogenase |
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[PTHR10174:SF2] | 1 |
341 |
- |
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[PTHR10174] | 1 |
341 |
- |
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IPR012280 [PF02774] | 143 |
324 |
Semialdehyde dehydrogenase, dimerisation domain |
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IPR000534 [PF01118] | 9 |
123 |
Semialdehyde dehydrogenase, NAD-binding |
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IPR000534 [SM00859] | 9 |
124 |
Semialdehyde dehydrogenase, NAD-binding |
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IPR005986 [TIGR01296] | 9 |
340 |
Aspartate-semialdehyde dehydrogenase, bacterial |
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[seg] | 10 |
20 |
- |
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250 |
340 |
S=289 I=62 E=1.28233e-27 |
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123 |
189 |
S=220 I=57 E=3.35274e-19 |
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188 |
249 |
S=207 I=69 E=1.27166e-17 |
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128 |
331 |
S=161 I=28 E=5.10975e-12 |
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21 |
341 |
S=125 I=25 E=1.25014e-07 |
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92 |
182 |
S=120 I=29 E=4.6636e-07 |
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31 |
91 |
S=110 I=49 E=6.95886e-06 |
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90 |
117 |
S=107 I=82 E=1.7232e-05 |
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[SSF55347] | 133 |
325 |
- |
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IPR016040 [SSF51735] | 8 |
148 |
NAD(P)-binding domain |
Access unfiltered results
Miscellaneous analyses
![]() XFF4834R_chr27510 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr27530 |
ID | dapA1 |
AC | XFF4834R_chr27520 |
LT | XFF4834R_chr27520 |
OR | XFF4834R_chr from 3182099 to 3183007 on strand - |
DE | dihydrodipicolinate synthase |
IP | Dihydrodipicolinate synthetase; Dihydrodipicolinate synthase subfamily; Aldolase-type TIM barrel |
CL | 1.5.1.7 Lysine, diaminopimelate GO:0009089 |
EC | |
GO |
InterPro Biological Process: metabolic process (GO:0008152) Biological Process: diaminopimelate biosynthetic process (GO:0019877) Molecular Function: dihydrodipicolinate synthase activity (GO:0008840) Molecular Function: lyase activity (GO:0016829) Molecular Function: catalytic activity (GO:0003824) Curated |
PM | |
AN | |
CC | COG: [EM] Amino acid transport and metabolism;Cell wall/membrane/envelope biogenesis; |
CC | MODEL: acur |
CC | STATUS: curated by darrasse (20110304) |
MW | 31103.1 Da |
SQ | 302 aa |
........10........20........30........40........50 |
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XFF4834R_chr25690 lcl|XFF4834R_chr28250363_2980271_r2_XFF4834R-XFF4834R_chr25690 |
5 |
230 |
S=292 I=37 E=5.58255e-29 |
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XFF4834R_chr12530 lcl|XFF4834R_chr13180571_1419488_f3_XFF4834R-XFF4834R_chr12530 |
4 |
187 |
S=176 I=33 E=6.62631e-15 |
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XFF4834R_chr25690 lcl|XFF4834R_chr28250363_2980271_r2_XFF4834R-XFF4834R_chr25690 |
5 |
230 |
S=292 I=37 E=5.58255e-29 |
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XFF4834R_chr12530 lcl|XFF4834R_chr13180571_1419488_f3_XFF4834R-XFF4834R_chr12530 |
4 |
187 |
S=176 I=33 E=6.62631e-15 |
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3 |
274 |
S=548 I=45 E=9.47793e-58 |
Dihydrodipicolinate synthase ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 15277749 |
|
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3 |
274 |
S=538 I=45 E=1.27377e-56 |
Dihydrodipicolinate synthase ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 11425723 |
|
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3 |
274 |
S=529 I=47 E=1.61052e-55 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 19077236 |
|
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3 |
274 |
S=516 I=41 E=6.84167e-54 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 3514578 |
|
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3 |
274 |
S=512 I=42 E=1.93088e-53 |
Dihydrodipicolinate synthetas ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 16113328 |
|
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3 |
274 |
S=501 I=40 E=4.45552e-52 |
Dihydrodipicolinate synthetase ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 3514578 |
|
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1 |
274 |
S=495 I=39 E=2.548e-51 |
Dihydrodipicolinate synthase ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 19060158 |
|
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2 |
274 |
S=478 I=40 E=2.31112e-49 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Lyase |
Pubmed 16329940 |
|
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1 |
274 |
S=469 I=39 E=2.87159e-48 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 8098035 |
|
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3 |
270 |
S=460 I=33 E=3.72696e-47 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
Pubmed 17038625 |
|
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1 |
302 |
S=1321 I=91 E=1.44372e-151 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
||
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1 |
302 |
S=1293 I=84 E=3.12891e-148 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
||
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1 |
302 |
S=1008 I=69 E=1.15451e-113 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
||
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1 |
302 |
S=1007 I=69 E=1.43569e-113 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
||
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1 |
274 |
S=955 I=72 E=3.02359e-107 |
Dihydrodipicolinate synthase EC=4.2.1.52 ; Amino-acid biosynthesis Cytoplasm Diaminopimelate Lyase Lysine Schiff base |
||
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IPR002220 [PR00146] | 36 |
57 |
Dihydrodipicolinate synthetase |
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IPR002220 [PR00146] | 72 |
90 |
Dihydrodipicolinate synthetase |
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IPR002220 [PR00146] | 104 |
120 |
Dihydrodipicolinate synthetase |
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IPR002220 [PR00146] | 129 |
146 |
Dihydrodipicolinate synthetase |
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IPR013785 [G3DSA:3.20.20.70] | 3 |
291 |
Aldolase-type TIM barrel |
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IPR002220 [PTHR12128] | 1 |
302 |
Dihydrodipicolinate synthetase |
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IPR002220 [PF00701] | 3 |
285 |
Dihydrodipicolinate synthetase |
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IPR005263 [TIGR00674] | 5 |
288 |
Dihydrodipicolinate synthase subfamily |
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[seg] | 275 |
294 |
- |
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129 |
190 |
S=177 I=58 E=5.11335e-14 |
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5 |
79 |
S=146 I=45 E=3.07353e-10 |
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72 |
130 |
S=121 I=47 E=3.77943e-07 |
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72 |
163 |
S=114 I=40 E=2.08728e-06 |
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191 |
217 |
S=114 I=96 E=2.25766e-06 |
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36 |
214 |
S=111 I=27 E=5.25957e-06 |
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127 |
274 |
S=103 I=31 E=5.34762e-05 |
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[SSF51569] | 2 |
288 |
- |
Access unfiltered results
Miscellaneous analyses