Xanthomonas fuscans subsp. fuscans

3 hits

  1. XFF4834R_chr17130proCXFF4834R_chr17130pyrroline-5-carboxylate reductase
  2. XFF4834R_chr23470proAXFF4834R_chr23470gamma-glutamylphosphate reductase
  3. XFF4834R_chr23480proBXFF4834R_chr23480gamma-glutamate kinase

proC XFF4834R_chr17130
XFF4834R_chr17120
XFF4834R_chr17120 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Framed OrthoMCL XFF4834R_chr17140
XFF4834R_chr17140
ID proC
AC XFF4834R_chr17130
LT XFF4834R_chr17130
OR XFF4834R_chr from 1961811 to 1962665 on strand -
DE pyrroline-5-carboxylate reductase
IP Delta 1-pyrroline-5-carboxylate reductase
CL 1.5.1.4 Proline GO:0006561
EC
GO InterPro
Biological Process: proline biosynthetic process (GO:0006561)
Biological Process: oxidation reduction (GO:0055114)
Molecular Function: pyrroline-5-carboxylate reductase activity (GO:0004735)

Curated
PM
AN
CC COG: [E] Amino acid transport and metabolism;
CC MODEL: XFF4834R
CC STATUS: curated by jacques (20110310)
MW 28868.5 Da
SQ 284 aa
  
........10........20........30........40........50
         |         |         |         |         |
MNTPASSSPSSSATTSIAFVGGGNMARSLIAGLIRQGAPAASIRVAEPVA
DLREALARDFGVQVVEDARAAVDAATTWVLAVKPQILPMVCTQLADLAQA
QQPLLVSIAAGITATQLQRWSGGDIAVVRAMPNTPALLGAGVTGLYANAR
VSATQRQQATQLLGSAGVTVWIDDEAQMDAVTAVSGSGPAYVFLLAEAME
AAAQAQGLPAATARTLVLQTLLGAARMLTESGEPPEVLRRRVTSPNGTTH
AAIETFQAGGFEALTAQAIAAATERGRSLSAANG

    






    

        
            
                XFF4834R
            
                
        
YP_364801.1 lcl|proC-XCV3070

        
17

	
283

	
S=950 I=74 E=4.32156e-108

	
pyrroline-5-carboxylate reductase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_643235.1 lcl|proC-XAC2926

        
17

	
283

	
S=949 I=75 E=5.56479e-108

	
pyrroline-5-carboxylate reductase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_638105.1 lcl|proC-XCC2757

        
17

	
283

	
S=851 I=67 E=3.75397e-96

	
pyrroline-5-carboxylate reductase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|proC-XALc_2163

        
17

	
262

	
S=709 I=62 E=7.43439e-79

	
probable pyrroline-5-carboxylate reductase (p5cr) protein

     	

   





    

        
                pubmed
        
        

        
17

	
280

	
S=542 I=47 E=3.84146e-57

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 2107123

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
17

	
280

	
S=376 I=36 E=5.08141e-37

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Oxidoreductase

	
Pubmed 12446909

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
17

	
256

	
S=338 I=34 E=1.95633e-32

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 8982386

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
17

	
261

	
S=337 I=34 E=2.51913e-32

	
Delta-1-pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Oxidoreductase

	
Pubmed 11929217

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
17

	
280

	
S=305 I=32 E=1.9498e-28

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 2199815

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
108

	
261

	
S=302 I=45 E=5.40769e-28

	
HI0307-like protein

	
Pubmed 16714566

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
17

	
280

	
S=291 I=32 E=1.17395e-26

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 6296787

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
17

	
260

	
S=290 I=32 E=1.24783e-26

	
Pyrroline-5-carboxylate reductase 1 EC=1.5.1.2 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 10568751

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
17

	
280

	
S=289 I=31 E=1.8313e-26

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Alternative splicing Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 8022935

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
17

	
280

	
S=288 I=31 E=2.37878e-26

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 11537868

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|P22008|P5CR_PSEAE

        
17

	
280

	
S=542 I=47 E=2.64898e-57

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

    





    

        
            
                sp_Pdown
            
        
        
sp|P43869|P5CR_HAEIN

        
17

	
261

	
S=412 I=40 E=1.69025e-41

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

    





    

        
            
                sp_Pdown
            
        
        
sp|Q9CPE8|P5CR_PASMU

        
17

	
252

	
S=362 I=38 E=1.69653e-35

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

    





    

        
            
                sp_Pdown
            
        
        
sp|P52053|P5CR_VIBAL

        
17

	
256

	
S=338 I=34 E=1.34904e-32

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

    





    

        
            
                sp_Pdown
            
        
        
sp|P17817|P5CR_SOYBN

        
17

	
280

	
S=305 I=32 E=1.34454e-28

	
Pyrroline-5-carboxylate reductase EC=1.5.1.2 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

    





    

        Iprscan
        IPR000304
	[PIRSF000193]
	
14

	
282

	
	
Delta 1-pyrroline-5-carboxylate reductase

    





    

        Iprscan
        IPR004455
	[PF03807]
	
16

	
264

	
	
NADP oxidoreductase, coenzyme F420-dependent

    





    

        Iprscan
        IPR000304
	[TIGR00112]
	
17

	
279

	
	
Delta 1-pyrroline-5-carboxylate reductase

    





    

        Iprscan
        IPR000304
	[PS00521]
	
234

	
257

	
	
Delta 1-pyrroline-5-carboxylate reductase

    





    

        Iprscan
        
	[seg]
	
3

	
16

	
	
-

    





    

        Iprscan
        
	[seg]
	
62

	
79

	
	
-

    





    

        Iprscan
        
	[seg]
	
93

	
105

	
	
-

    





    

        Iprscan
        
	[seg]
	
194

	
213

	
	
-

    





    

        Iprscan
        
	[seg]
	
263

	
272

	
	
-

    





    

        
            
                
            
                
        
PD002555

        
181

	
261

	
S=163 I=46 E=3.09012e-12

    	
    





    

        
            
                
            
                
        
PD994109

        
106

	
179

	
S=131 I=43 E=2.04437e-08

    	
    





    

        
            
                
            
                
        
PDA86292

        
131

	
183

	
S=114 I=45 E=2.30592e-06

    	
    




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  Validation code (copy this one RbGxjua6)  
 
     



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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            36 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            51 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                9 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr17130.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr17130.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr17130.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr17130.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






proA XFF4834R_chr23470




    

         
             
            XFF4834R_chr23460
            
XFF4834R_chr23460
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr23480
            
XFF4834R_chr23480
            
        		

    





    

        ID
        proA
    

    

        AC
        XFF4834R_chr23470
    

    

        LT
        XFF4834R_chr23470
    

    

        OR
        XFF4834R_chr from 2717560 to 2718804 on strand -
    

   

        DE
        gamma-glutamylphosphate reductase
  

   

        IP
        Gamma-glutamyl phosphate reductase GPR; Glutamate-5-semialdehyde dehydrogenase; Aldehyde dehydrogenase, N-terminal; Aldehyde dehydrogenase, C-terminal; Gamma-glutamyl phosphate reductase GPR, conserved site
  
  
  
  

        CL
        1.5.1.4 Proline	GO:0006561 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: oxidation reduction (GO:0055114)
Biological Process: metabolic process (GO:0008152)
Biological Process: proline biosynthetic process (GO:0006561)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: glutamate-5-semialdehyde dehydrogenase activity (GO:0004350)
Molecular Function: NADP or NADPH binding (GO:0050661)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [E] Amino acid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by jacques (20110221)
  

  
  


    

        MW
        44173.3 Da
    


    

        SQ
        414 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MTIKTLALQCRDAAQVVSQLSAQAKHALLDAMAAALEADAAAILAANARD
LEAARAKGTGSAMLDRLALDDKRLAGIATALREVAQLPDPVGLITREEVR
PNGIRVQKVRVPLGVIAMIYEARPNVTADAAALCIKAGNGVILRGGSEAI
HSNTAIARALQRALRKANVPEAALTLVEDLRRETMLELLQLSDIVDLAIP
RGGEGLIRFVAEHARVPVIKHYKGVCHLFVDASADLTLALRLLIDGKATR
PAACNSLETLLVHADIAERFLPLAAQALCERKVELRGDAATRAVLPEIAP
ADDDDYAAEFLDLILAIRVVPDLDTALAHIRQYGSDHTEVIATQDADNAE
RFVQALRSAVVMVNASSRFSDGGELGLGAEIGISTTRLHSYGPMGLEALT
VERFVVRGQGQVRH

    






    

        Hamap
        PROA_MF_00412
	raw_score=11110 norm_score=44.244
	
Gamma-glutamyl phosphate reductase [proA].

    





    

        
            
                XFF4834R
            
                
        
NP_642658.1 lcl|proA-XAC2342

        
1

	
414

	
S=1567 I=81 E=0

	
gamma-glutamyl phosphate reductase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_364272.1 lcl|proA-XCV2541

        
1

	
414

	
S=1561 I=79 E=0

	
gamma-glutamyl phosphate reductase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_637593.1 lcl|proA-XCC2238

        
1

	
414

	
S=1476 I=76 E=1.14232e-171

	
gamma-glutamyl phosphate reductase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|proA-XALc_1886

        
2

	
414

	
S=1395 I=71 E=9.03051e-162

	
probable gamma-glutamyl phosphate reductase (gpr) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase) (gsa dehydrogenase) protein

     	

   





    

        
                pubmed
        
        

        
77

	
413

	
S=915 I=55 E=4.11011e-102

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 17965706

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
77

	
413

	
S=878 I=49 E=1.21819e-97

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 18441057

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
77

	
413

	
S=830 I=49 E=8.11635e-92

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis NADP Oxidoreductase Proline

	
Pubmed 7988899

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
57

	
414

	
S=819 I=45 E=1.65765e-90

	
Gamma-glutamyl phosphate reductase (GPR) EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 12446909

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
57

	
414

	
S=794 I=42 E=2.07421e-87

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 11375165

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
77

	
413

	
S=786 I=45 E=1.88295e-86

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 2984205

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
77

	
413

	
S=783 I=43 E=4.42503e-86

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 19014707

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
76

	
414

	
S=779 I=44 E=1.24885e-85

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 8969524

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
77

	
413

	
S=754 I=45 E=1.25663e-82

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 18192381

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
77

	
413

	
S=740 I=43 E=7.90312e-81

	
Glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

	
Pubmed 12693104

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q5GZF2|PROA_XANOR

        
1

	
414

	
S=1619 I=79 E=0

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

    





    

        
            
                sp_Pdown
            
        
        
sp|B2SHW6|PROA_XANOP

        
1

	
414

	
S=1614 I=79 E=0

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

    





    

        
            
                sp_Pdown
            
        
        
sp|Q2P2G1|PROA_XANOM

        
1

	
414

	
S=1614 I=79 E=0

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

    





    

        
            
                sp_Pdown
            
        
        
sp|B0RS59|PROA_XANCB

        
1

	
414

	
S=1569 I=77 E=0

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PK35|PROA_XANAC

        
1

	
414

	
S=1567 I=81 E=0

	
Gamma-glutamyl phosphate reductase EC=1.2.1.41 ; Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline

    





    

        Iprscan
        IPR016162
	[G3DSA:3.40.605.10]
	
1

	
218

	
	
Aldehyde dehydrogenase, N-terminal

    





    

        Iprscan
        IPR016163
	[G3DSA:3.40.309.10]
	
219

	
394

	
	
Aldehyde dehydrogenase, C-terminal

    





    

        Iprscan
        IPR012134
	[MF_00412]
	
2

	
414

	
	
Glutamate-5-semialdehyde dehydrogenase

    





    

        Iprscan
        IPR012134
	[PIRSF000151]
	
1

	
414

	
	
Glutamate-5-semialdehyde dehydrogenase

    





    

        Iprscan
        IPR000965
	[TIGR00407]
	
10

	
403

	
	
Gamma-glutamyl phosphate reductase GPR

    





    

        Iprscan
        IPR020593
	[PS01223]
	
320

	
341

	
	
Gamma-glutamyl phosphate reductase GPR, conserved site

    





    

        Iprscan
        
	[seg]
	
13

	
56

	
	
-

    





    

        Iprscan
        
	[seg]
	
64

	
75

	
	
-

    





    

        Iprscan
        
	[seg]
	
372

	
383

	
	
-

    





    

        
            
                
            
                
        
PD403271

        
250

	
354

	
S=308 I=53 E=8.8028e-30

    	
    





    

        
            
                
            
                
        
PD813400

        
76

	
149

	
S=265 I=65 E=1.3556e-24

    	
    





    

        
            
                
            
                
        
PDA1E4Y5

        
152

	
247

	
S=248 I=47 E=1.47663e-22

    	
    





    

        
            
                
            
                
        
PDA1D4M4

        
145

	
364

	
S=130 I=26 E=2.83119e-08

    	
    




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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            42 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            0 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            1 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                9 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr23470.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr23470.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr23470.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr23470.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






proB XFF4834R_chr23480




    

         
             
            XFF4834R_chr23470
            
XFF4834R_chr23470
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr23490
            
XFF4834R_chr23490
            
        		

    





    

        ID
        proB
    

    

        AC
        XFF4834R_chr23480
    

    

        LT
        XFF4834R_chr23480
    

    

        OR
        XFF4834R_chr from 2718964 to 2720118 on strand -
    

   

        DE
        gamma-glutamate kinase
  

   

        IP
        Delta l-pyrroline-5-carboxylate synthetase; Glutamate 5-kinase, pro-B; Glutamate 5-kinase, conserved site
  
  
  
  

        CL
        1.5.1.4 Proline	GO:0006561 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: proline biosynthetic process (GO:0006561)
Biological Process: cellular amino acid biosynthetic process (GO:0008652)
Cellular Component: cytoplasm (GO:0005737)
Molecular Function: RNA binding (GO:0003723)
Molecular Function: glutamate 5-kinase activity (GO:0004349)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [E] Amino acid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by jacques (20110221)
  

  
  


    

        MW
        40594.8 Da
    


    

        SQ
        384 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MSTPASTLSPFTEQALPPWRRAVLKVGSSLLAADGGGLSPRFALGLAQFV
SANLAAGRELVIVSSGAVAAGRAILPKAMDIGAPIAARQALAALGQAQLI
ALWQRFFERPVAQVLLTHDDLRNRRRYLNARATLGELLRLGALPVINEND
TVSVDELKLGDNDNLAAIVAALVDADALFIATDIDGLYSADPRSNPLARP
LDDVPELTPEVLAMAGGSGSNVGTGGMRTKLEAAAKAGAAGIETYLFNGR
SGEVVRALAQDRLRGTRIHAARTRIAARKYWLRHAPVEAGAILIDDGAAA
ALTGKGASLLPGGVADAHGDFRRGDMVEIRRRDTTGEQCLARGVSQYSAL
DIRRIAGRHSREIENVLGYSYGENVVHRDDLVLL

    





Show or not Domain decomposition
 

    

        Hamap
        PROB_MF_00456
	raw_score=5652 norm_score=34.804
	
Glutamate 5-kinase [proB].

    





    

        
            
                XFF4834R
            
                
        
YP_364273.1 lcl|proB-XCV2542

        
1

	
384

	
S=1236 I=68 E=1.46167e-142

	
gamma-glutamyl kinase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_642659.2 lcl|proB-XAC2343

        
1

	
384

	
S=1232 I=68 E=3.61947e-142

	
gamma-glutamyl kinase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_637594.2 lcl|proB-XCC2239

        
1

	
384

	
S=1090 I=61 E=6.18057e-125

	
gamma-glutamyl kinase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|proB-XALc_1887

        
1

	
383

	
S=1026 I=57 E=4.07532e-117

	
probable glutamate 5-kinase (gamma-glutamyl kinase) (gk) protein

     	

   





    

        
                pubmed
        
        

        
46

	
383

	
S=332 I=35 E=1.98911e-31

	
Glutamate 5-kinase EC=2.7.2.11 ; Amino-acid biosynthesis ATP-binding Cytoplasm Nucleotide-binding Proline Transferase

	
Pubmed 7988899

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
55

	
383

	
S=329 I=31 E=3.75902e-31

	
Glutamate 5-kinase EC=2.7.2.11 ; Amino-acid biosynthesis ATP-binding Cytoplasm Nucleotide-binding Proline Transferase

	
Pubmed 1851803,1316937

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
55

	
382

	
S=327 I=31 E=6.80075e-31

	
Glutamate 5-kinase EC=2.7.2.11 ; Amino-acid biosynthesis ATP-binding Cytoplasm Nucleotide-binding Proline Transferase

	
Pubmed 6089111

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
57

	
383

	
S=316 I=28 E=1.3297e-29

	
Glutamate 5-kinase ; ATP-binding Amino-acid biosynthesis Cytoplasm Nucleotide-binding Proline Transferase

	
Pubmed 18226230

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
48

	
382

	
S=277 I=26 E=7.64526e-25

	
Glutamate 5-kinase 1 EC=2.7.2.11 ; Amino-acid biosynthesis ATP-binding Cytoplasm Nucleotide-binding Proline Transferase

	
Pubmed 8083159

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
57

	
384

	
S=258 I=26 E=1.67283e-22

	
Glutamyl kinase EC=2.7.2.11 ; ATP-binding Amino-acid biosynthesis Cytoplasm Nucleotide-binding Proline Transferase

	
Pubmed 12693104

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
58

	
384

	
S=257 I=30 E=1.90656e-22

	
Gamma-glutamyl kinase ; ATP-binding Amino-acid biosynthesis Cytoplasm Nucleotide-binding Proline Transferase

	
Pubmed 18310024

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
57

	
384

	
S=255 I=26 E=3.76354e-22

	
Glutamyl kinase EC=2.7.2.11 ; ATP-binding Amino-acid biosynthesis Cytoplasm Nucleotide-binding Proline Transferase

	
Pubmed 12693104

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
40

	
384

	
S=245 I=24 E=6.62761e-21

	
Glutamate 5-kinase EC=2.7.2.11 ; Amino-acid biosynthesis ATP-binding Cytoplasm Nucleotide-binding Proline Transferase

	
Pubmed 11844777

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
103

	
372

	
S=236 I=31 E=8.09253e-20

	
Glutamate 5-kinase EC=2.7.2.11 ; Amino-acid biosynthesis Cytoplasm Proline Transferase

	
Pubmed 18700039

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PK34|PROB_XANAC

        
23

	
384

	
S=1115 I=66 E=1.43175e-126

	
Glutamate 5-kinase EC=2.7.2.11 ; Amino-acid biosynthesis ATP-binding Cytoplasm Nucleotide-binding Proline Transferase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q3BSJ0|PROB_XANC5

        
23

	
384

	
S=1113 I=65 E=2.45828e-126

	
Glutamate 5-kinase EC=2.7.2.11 ; Amino-acid biosynthesis ATP-binding Cytoplasm Nucleotide-binding Proline Transferase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q5GZF1|PROB_XANOR

        
23

	
384

	
S=1082 I=64 E=1.80573e-122

	
Glutamate 5-kinase EC=2.7.2.11 ; Amino-acid biosynthesis ATP-binding Cytoplasm Nucleotide-binding Proline Transferase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q2P2G0|PROB_XANOM

        
23

	
384

	
S=1072 I=64 E=2.91439e-121

	
Glutamate 5-kinase EC=2.7.2.11 ; Amino-acid biosynthesis ATP-binding Cytoplasm Nucleotide-binding Proline Transferase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8P8K2|PROB_XANCP

        
23

	
384

	
S=1009 I=61 E=1.23188e-113

	
Glutamate 5-kinase EC=2.7.2.11 ; Amino-acid biosynthesis ATP-binding Cytoplasm Nucleotide-binding Proline Transferase

    





    

        Iprscan
        IPR001048
	[G3DSA:3.40.1160.10]
	
13

	
270

	
	
Aspartate/glutamate/uridylate kinase

    





    

        Iprscan
        
	[MF_00456]
	
19

	
273

	
	
-

    





    

        Iprscan
        IPR011529
	[PIRSF000729]
	
12

	
384

	
	
Glutamate 5-kinase, pro-B

    





    

        Iprscan
        IPR001048
	[PF00696]
	
20

	
248

	
	
Aspartate/glutamate/uridylate kinase

    





    

        Iprscan
        IPR002478
	[PF01472]
	
290

	
367

	
	
Pseudouridine synthase/archaeosine transglycosylase

    





    

        Iprscan
        IPR002478
	[SM00359]
	
290

	
376

	
	
Pseudouridine synthase/archaeosine transglycosylase

    





    

        Iprscan
        IPR005715
	[TIGR01027]
	
20

	
383

	
	
Glutamate 5-kinase, ProB-related

    





    

        Iprscan
        IPR019797
	[PS00902]
	
220

	
237

	
	
Glutamate 5-kinase, conserved site

    





    

        Iprscan
        IPR002478
	[PS50890]
	
289

	
370

	
	
Pseudouridine synthase/archaeosine transglycosylase

    





    

        Iprscan
        
	[seg]
	
27

	
39

	
	
-

    





    

        Iprscan
        
	[seg]
	
81

	
102

	
	
-

    





    

        Iprscan
        
	[seg]
	
119

	
132

	
	
-

    





    

        Iprscan
        
	[seg]
	
161

	
181

	
	
-

    





    

        Iprscan
        
	[seg]
	
216

	
226

	
	
-

    





    

        Iprscan
        
	[seg]
	
233

	
241

	
	
-

    





    

        Iprscan
        
	[seg]
	
266

	
278

	
	
-

    





    

        Iprscan
        
	[seg]
	
289

	
302

	
	
-

    





    

        
            
                
            
                
        
PD005319

        
279

	
384

	
S=222 I=44 E=2.12233e-19

    	
    





    

        
            
                
            
                
        
PD102733

        
111

	
158

	
S=116 I=50 E=1.54729e-06

    	
    




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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            18 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            392 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            1 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                17 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr23480.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr23480.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr23480.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBpmooiS/XFF4834R_chr23480.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    •