Xanthomonas fuscans subsp. fuscans

4 hits

  1. XFF4834R_chr11890leuCXFF4834R_chr118903-isopropylmalate isomerase subunit, dehydratase component
  2. XFF4834R_chr11900leuDXFF4834R_chr119003-isopropylmalate isomerase subunit
  3. XFF4834R_chr11910leuBXFF4834R_chr11910probable 3-isopropylmalate dehydrogenase
  4. XFF4834R_chr11920leuAXFF4834R_chr119202-isopropylmalate synthase

leuC XFF4834R_chr11890
XFF4834R_chr11880
XFF4834R_chr11880 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Framed OrthoMCL XFF4834R_chr11900
XFF4834R_chr11900
ID leuC
AC XFF4834R_chr11890
LT XFF4834R_chr11890
OR XFF4834R_chr from 1335282 to 1336721 on strand +
DE 3-isopropylmalate isomerase subunit, dehydratase component
IP Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Homoaconitase/3-isopropylmalate dehydratase, small/large subunit; Aconitase family, 4Fe-4S cluster binding site
CL 1.5.1.19 Leucine GO:0009098
EC
GO InterPro
4 sulfur cluster binding (GO:0051539)
Biological Process: leucine biosynthetic process (GO:0009098)
Biological Process: metabolic process (GO:0008152)
Molecular Function: 3-isopropylmalate dehydratase activity (GO:0003861)

Curated
PM
AN
CC COG: [E] Amino acid transport and metabolism;
CC MODEL: XFF4834R
CC STATUS: curated by darrasse (20120326)
MW 51429.1 Da
SQ 479 aa
  
........10........20........30........40........50
         |         |         |         |         |
MTAKTLYDKLWELHEVTRRDDGSSLIYIDRHILHEVTSPQAFEGLRLAGR
KPWRIDANIATLDHNVPTTRAERQGGLESISDEVSRLQVQTLDENCDDFG
ILEFKMNDARQGIVHVVGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGI
GTSEVEHVLATQCLIAKKMKNMQVRVEGTLPFGVTAKDIVLAVIGKIGTA
GGNGHALEFAGSAIRALSMEGRMTICNMSIEAGARVGMVAVDEKTIAYVK
GRPFAPKGANWEAAVALWSTLVSDPDAHFDTVVELRAEDIKPQVSWGTSP
EMVLAIDQHVPDPAIEQDPTKRDSIERALKYMGLKANQPITAIRLDRVFI
GSCTNSRIEDLRAAAAVAKGRKVASSIKQALVVPGSGLVKAQAEAEGLDK
VFLDAGFEWREPGCSMCLAMNPDKLGSGEHCASTSNRNFEGRQGAGGRTH
LVSPAMAAAAAVSGHFVDVRELQGIESRE

    






    

        Hamap
        LEUC_MF_01026
	raw_score=17293 norm_score=61.645
	
3-isopropylmalate dehydratase large subunit [leuC].

    





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr20230 lcl|acnA-XFF4834R_chr20230

        
129

	
301

	
S=187 I=31 E=6.37867e-16

	
aconitate hydratase 1

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr11330 lcl|acnA-XFF4834R_chr11330

        
122

	
250

	
S=171 I=36 E=4.49308e-14

	
aconitate hydratase 1

     	

   





    

        
            
                X.species
            
                
        
NP_643765.1 lcl|leuC-XAC3458

        
1

	
479

	
S=2389 I=94 E=0

	
isopropylmalate isomerase large subunit

     	

   





    

        
            
                X.species
            
                
        
YP_365317.1 lcl|leuC-XCV3586

        
1

	
472

	
S=2342 I=93 E=0

	
isopropylmalate isomerase large subunit

     	

   





    

        
            
                X.species
            
                
        
NP_638677.1 lcl|leuC-XCC3331

        
1

	
479

	
S=2340 I=92 E=0

	
isopropylmalate isomerase large subunit

     	

   





    

        
            
                X.species
            
                
        
 lcl|leuC-XALc_0753

        
4

	
472

	
S=1194 I=53 E=2.28179e-137

	
probable 3-isopropylmalate dehydratase large subunit protein

     	

   





    

        
            
                X.species
            
                
        
NP_642208.1 lcl|rpfA-XAC1882

        
129

	
301

	
S=184 I=31 E=5.33037e-15

	
aconitate hydratase

     	

   





    

        
            
                X.species
            
                
        
NP_637225.1 lcl|rpfA-XCC1860

        
129

	
301

	
S=181 I=31 E=1.0991e-14

	
aconitate hydratase

     	

   





    

        
            
                X.species
            
                
        
YP_363655.1 lcl|acnA-XCV1924

        
129

	
301

	
S=181 I=31 E=1.2747e-14

	
aconitate hydratase

     	

   





    

        
            
                X.species
            
                
        
 lcl|acnA-XALc_1349

        
129

	
301

	
S=175 I=32 E=6.07005e-14

	
probable aconitate hydratase 1 protein

     	

   





    

        
            
                X.species
            
                
        
NP_641475.1 lcl|acnA-XAC1139

        
122

	
250

	
S=174 I=36 E=8.98639e-14

	
aconitate hydratase

     	

   





    

        
            
                X.species
            
                
        
YP_362889.1 lcl|acnA-XCV1158

        
122

	
250

	
S=171 I=36 E=1.69824e-13

	
aconitate hydratase

     	

   





    

        
                pubmed
        
        

        
3

	
472

	
S=1745 I=69 E=0

	
3-isopropylmalate dehydratase large subunit ; 4Fe-4S Amino-acid biosynthesis Branched-chain Iron Iron-sulfur Leucine Lyase Metal-binding

	
Pubmed 12754231

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
471

	
S=1682 I=68 E=0

	
3-isopropylmalate dehydratase large subunit EC=4.2.1.33 ; 4Fe-4S Amino-acid biosynthesis Branched-chain Iron Iron-sulfur Leucine Lyase Metal-binding

	
Pubmed 19077236

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
473

	
S=1545 I=64 E=2.67806e-178

	
3-isopropylmalate dehydratase large subunit EC=4.2.1.33 ; 4Fe-4S Amino-acid biosynthesis Branched-chain Iron Iron-sulfur Leucine Lyase Metal-b

	
Pubmed 12070767

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
472

	
S=1535 I=61 E=3.82564e-177

	
3-isopropylmalate dehydratase EC=4.2.1.33 ; 4Fe-4S Amino-acid biosynthesis Branched-chain Iron Iron-sulfur Leucine Lyase Metal-binding

	
Pubmed 8766701

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
471

	
S=1513 I=62 E=1.77175e-174

	
3-isopropylmalate dehydratase EC=4.2.1.33 ; Lyase

	
Pubmed 11489863

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
473

	
S=1507 I=60 E=9.95707e-174

	
Putative alpha-isopropylmalate isomerase EC=4.2.1.33 ; Lyase

	
Pubmed 15088140

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
473

	
S=1506 I=60 E=1.38682e-173

	
3-isopropylmalate dehydratase EC=4.2.1.33 ; 4Fe-4S Amino-acid biosynthesis Branched-chain Iron Iron-sulfur Leucine Lyase Metal-binding

	
Pubmed 2693214

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
473

	
S=1504 I=60 E=2.12597e-173

	
3-isopropylmalate dehydratase EC=4.2.1.33 ; 4Fe-4S Amino-acid biosynthesis Branched-chain Iron Iron-sulfur Leucine Lyase Metal-binding Phosphopro

	
Pubmed 1840714

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
473

	
S=1503 I=60 E=3.17495e-173

	
Putative alpha-isopropylmalate isomerase EC=4.2.1.33 ; Lyase

	
Pubmed 15088140

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
473

	
S=1480 I=60 E=1.81264e-170

	
3-isopropylmalate dehydratase large subunit EC=4.2.1.33 ; 4Fe-4S Amino-acid biosynthesis Branched-chain Iron Iron-sulfur Leucine Lyase Metal-bin

	
Pubmed 2124684,1630901

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR015931
	[G3DSA:3.30.499.10]
	
1

	
170

	
	
Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3

    





    

        Iprscan
        IPR015932
	[G3DSA:3.40.1060.10]
	
172

	
287

	
	
Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2

    





    

        Iprscan
        IPR015931
	[G3DSA:3.30.499.10]
	
322

	
472

	
	
Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3

    





    

        Iprscan
        IPR004430
	[MF_01026]
	
2

	
473

	
	
3-isopropylmalate dehydratase, large subunit region

    





    

        Iprscan
        IPR001030
	[PF00330]
	
5

	
464

	
	
Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha

    





    

        Iprscan
        IPR004430
	[TIGR00170]
	
2

	
472

	
	
3-isopropylmalate dehydratase, large subunit region

    





    

        Iprscan
        IPR018136
	[PS00450]
	
345

	
361

	
	
Aconitase family, 4Fe-4S cluster binding site

    





    

        Iprscan
        IPR018136
	[PS01244]
	
406

	
419

	
	
Aconitase family, 4Fe-4S cluster binding site

    





    

        Iprscan
        
	[seg]
	
362

	
376

	
	
-

    





    

        Iprscan
        
	[seg]
	
455

	
461

	
	
-

    





    

        
            
                
            
                
        
PD000511

        
112

	
475

	
S=628 I=43 E=1.62404e-68

    	
    





    

        
            
                
            
                
        
PDA1X271

        
204

	
307

	
S=364 I=62 E=1.38737e-36

    	
    





    

        
            
                
            
                
        
PD556812

        
413

	
454

	
S=210 I=88 E=7.88412e-18

    	
    





    

        
            
                
            
                
        
PD299828

        
126

	
203

	
S=194 I=54 E=5.80096e-16

    	
    





    

        
            
                
            
                
        
PD738556

        
1

	
46

	
S=175 I=68 E=1.08493e-13

    	
    





    

        
            
                
            
                
        
PD581395

        
47

	
111

	
S=169 I=54 E=5.73622e-13

    	
    





    

        
            
                
            
                
        
PDA7S6E4

        
343

	
411

	
S=167 I=52 E=1.26823e-12

    	
    





    

        
            
                
            
                
        
PDA3N4B3

        
301

	
334

	
S=145 I=82 E=5.92493e-10

    	
    





    

        
            
                
            
                
        
PDA318B8

        
310

	
361

	
S=144 I=50 E=7.62943e-10

    	
    





    

        
            
                
            
                
        
PDA231C4

        
310

	
339

	
S=130 I=83 E=3.38549e-08

    	
    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            166 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            0 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            2 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            1 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                10 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11890.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11890.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11890.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11890.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






leuD XFF4834R_chr11900




    

         
             
            XFF4834R_chr11890
            
XFF4834R_chr11890
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr11910
            
XFF4834R_chr11910
            
        		

    





    

        ID
        leuD
    

    

        AC
        XFF4834R_chr11900
    

    

        LT
        XFF4834R_chr11900
    

    

        OR
        XFF4834R_chr from 1336799 to 1337446 on strand +
    

   

        DE
        3-isopropylmalate isomerase subunit
  

   

        IP
        Aconitase A/isopropylmalate dehydratase small subunit, swivel
  
  
  
  

        CL
        1.5.1.19 Leucine	GO:0009098 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: metabolic process (GO:0008152)
Biological Process: leucine biosynthetic process (GO:0009098)
Cellular Component: 3-isopropylmalate dehydratase complex (GO:0009316)
Molecular Function: 3-isopropylmalate dehydratase activity (GO:0003861)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [E] Amino acid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by darrasse (20120326)
  

  
  


    

        MW
        24293.1 Da
    


    

        SQ
        215 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MTPFTQHTGLVAPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFDEWRYLD
IGEPGRDNSTRPLNPEFVLNFRRYQGASVLLARENFGCGSSREHAPWALD
EYGFRTVIAPSFADIFYNNSFKNGLLPIVLAEAQVDALFEQCLATEGYQL
TVDLAAQRVRRHDGVEYGFDIDAFRKHCLLNGLDDIGLTLQDADAIGRFE
QGHRARQPWLFGALQ

    






    

        Hamap
        LEUD_MF_01031
	raw_score=5572 norm_score=43.668
	
3-isopropylmalate dehydratase small subunit [leuD].

    





    

        
            
                X.species
            
                
        
YP_365316.1 lcl|leuD-XCV3585

        
1

	
215

	
S=1124 I=99 E=2.59004e-129

	
isopropylmalate isomerase small subunit

     	

   





    

        
            
                X.species
            
                
        
NP_643764.1 lcl|leuD-XAC3457

        
1

	
215

	
S=1115 I=98 E=2.75074e-128

	
isopropylmalate isomerase small subunit

     	

   





    

        
            
                X.species
            
                
        
NP_638676.1 lcl|leuD-XCC3330

        
1

	
215

	
S=1083 I=95 E=2.03825e-124

	
isopropylmalate isomerase small subunit

     	

   





    

        
            
                X.species
            
                
        
 lcl|leuD-XALc_0752

        
1

	
203

	
S=431 I=46 E=2.37284e-45

	
probable 3-isopropylmalate dehydratase small subunit protein

     	

   





    

        
                pubmed
        
        

        
1

	
215

	
S=936 I=82 E=4.84661e-105

	
3-isopropylmalate dehydratase small subunit EC=4.2.1.33 ; Amino-acid biosynthesis Branched-chain Leucine Lyase

	
Pubmed 9108283

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
214

	
S=827 I=73 E=9.21957e-92

	
3-isopropylmalate dehydratase small subunit ; Amino-acid biosynthesis Branched-chain Leucine Lyase

	
Pubmed 12754231

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
205

	
S=661 I=65 E=9.80699e-72

	
3-isopropylmalate dehydratase small subunit 1 EC=4.2.1.33 ; Amino-acid biosynthesis Branched-chain Leucine Lyase

	
Pubmed 2993799

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
208

	
S=642 I=63 E=2.38251e-69

	
3-isopropylmalate dehydratase small subunit EC=4.2.1.33 ; Amino-acid biosynthesis Branched-chain Leucine Lyase

	
Pubmed 1630901

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
211

	
S=577 I=57 E=1.6126e-61

	
3-isopropylmalate dehydratase small subunit EC=4.2.1.33 ; Amino-acid biosynthesis Branched-chain Leucine Lyase

	
Pubmed 19077236

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
212

	
S=558 I=53 E=3.59054e-59

	
3-isopropylmalate dehydratase EC=4.2.1.33 ; 4Fe-4S Amino-acid biosynthesis Branched-chain Iron Iron-sulfur Leucine Lyase Metal-binding

	
Pubmed 8901103

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
201

	
S=549 I=51 E=3.58754e-58

	
3-isopropylmalate dehydratase small subunit EC=4.2.1.33 ; Amino-acid biosynthesis Branched-chain Leucine Lyase Plasmid

	
Pubmed 9812361

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
212

	
S=546 I=54 E=9.60886e-58

	
3-isopropylmalate dehydratase EC=4.2.1.33 ; 4Fe-4S Amino-acid biosynthesis Branched-chain Iron Iron-sulfur Leucine Lyase Metal-binding

	
Pubmed 8766701

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
212

	
S=545 I=54 E=1.16406e-57

	
Putative alpha-isopropylmalate isomerase EC=4.2.1.33 ; Lyase

	
Pubmed 15088140

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
212

	
S=545 I=54 E=1.19491e-57

	
Putative alpha-isopropylmalate isomerase EC=4.2.1.33 ; Lyase

	
Pubmed 15088140

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
215

	
S=1124 I=99 E=6.39964e-128

	
3-isopropylmalate dehydratase small subunit EC=4.2.1.33 ; Amino-acid biosynthesis Branched-chain Leucine Lyase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
215

	
S=1115 I=98 E=6.7967e-127

	
3-isopropylmalate dehydratase small subunit EC=4.2.1.33 ; Amino-acid biosynthesis Branched-chain Leucine Lyase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
215

	
S=1095 I=96 E=1.81739e-124

	
3-isopropylmalate dehydratase small subunit EC=4.2.1.33 ; Amino-acid biosynthesis Branched-chain Leucine Lyase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
215

	
S=1095 I=96 E=1.81739e-124

	
3-isopropylmalate dehydratase small subunit EC=4.2.1.33 ; Amino-acid biosynthesis Branched-chain Leucine Lyase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
215

	
S=1095 I=96 E=1.81739e-124

	
3-isopropylmalate dehydratase small subunit EC=4.2.1.33 ; Amino-acid biosynthesis Branched-chain Leucine Lyase

	

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR015928
	[G3DSA:3.20.19.10]
	
14

	
134

	
	
Aconitase/3-isopropylmalate dehydratase, swivel

    





    

        Iprscan
        IPR004431
	[MF_01031]
	
1

	
210

	
	
3-isopropylmalate dehydratase, small subunit region

    





    

        Iprscan
        IPR000573
	[PF00694]
	
1

	
133

	
	
Aconitase A/isopropylmalate dehydratase small subunit, swivel

    





    

        Iprscan
        IPR004431
	[TIGR00171]
	
1

	
196

	
	
3-isopropylmalate dehydratase, small subunit region

    





    

        
            
                
            
                
        
PDA1E493

        
150

	
205

	
S=161 I=60 E=5.23367e-12

    	
    





    

        
            
                
            
                
        
PD001077

        
79

	
138

	
S=135 I=45 E=6.96102e-09

    	
    





    

        
            
                
            
                
        
PD018132

        
29

	
78

	
S=119 I=60 E=5.53986e-07

    	
    





    

        
            
                
            
                
        
PD858170

        
1

	
26

	
S=117 I=81 E=1.1523e-06

    	
    





    

        
            
                
            
                
        
PD489052

        
77

	
134

	
S=112 I=43 E=3.7389e-06

    	
    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            65 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            470 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            1 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                4 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11900.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11900.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11900.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11900.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






leuB XFF4834R_chr11910




    

         
             
            XFF4834R_chr11900
            
XFF4834R_chr11900
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr11920
            
XFF4834R_chr11920
            
        		

    





    

        ID
        leuB
    

    

        AC
        XFF4834R_chr11910
    

    

        LT
        XFF4834R_chr11910
    

    

        OR
        XFF4834R_chr from 1337540 to 1338613 on strand +
    

   

        DE
        probable 3-isopropylmalate dehydrogenase
  

   

        IP
        Isocitrate/isopropylmalate dehydrogenase; Isopropylmalate dehydrogenase; Isocitrate/isopropylmalate dehydrogenase, conserved site
  
  
  
  

        CL
        1.5.1.19 Leucine	GO:0009098 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: oxidation reduction (GO:0055114)
Biological Process: leucine biosynthetic process (GO:0009098)
Cellular Component: cytoplasm (GO:0005737)
Molecular Function: NAD or NADH binding (GO:0051287)
Molecular Function: 3-isopropylmalate dehydrogenase activity (GO:0003862)
Molecular Function: magnesium ion binding (GO:0000287)
NAD or NADP as acceptor (GO:0016616)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [CE] Energy production and conversion;Amino acid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by opruvost (20100506)
  

  
  


    

        MW
        38189.4 Da
    


    

        SQ
        357 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MSKQILILPGDGIGPEIMAEAVKVLKRIDAQHGLGFQLVYDELGGAAYDK
YGSPLADETLERARGADAVLLGAVGGPQWDTIDPSLRPERGLLKIRSQLG
LFANLRPALLYPQLADASTLKPEVVAGLDLLILRELTGGIYFGQPRGNRT
LDNGERQAYDTLPYSESEIRRIAKAGFDMARLRGKKLCSVDKANVLASSQ
LWRAVVEEVAKDYPDIALSHMYVDNAAMQLVRAPKQFDVIVTDNMFGDIL
SDQASMLTGSIGMLPSASLDANSKGMYEPCHGSAPDIAGKGIANPLATIL
SVAMMLRYTFAQADAADAIERAVGKVLDQGLRTADIWSEGTTKVGTVAMG
DAVVAAL

    





Show or not Domain decomposition
 

    

        
            
                XFF4834R
            
                
        
XFF4834R_chr10500 lcl|XFF4834R_chr11120960_1193967_f1_XFF4834R-XFF4834R_chr10500

        
1

	
308

	
S=440 I=36 E=9.60803e-47

	
predicted dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr10500 lcl|XFF4834R_chr11120960_1193967_f1_XFF4834R-XFF4834R_chr10500

        
1

	
308

	
S=440 I=36 E=9.60803e-47

	
predicted dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
YP_365315.1 lcl|leuB-XCV3584

        
1

	
357

	
S=1722 I=93 E=0

	
3-isopropylmalate dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
NP_643763.1 lcl|leuB-XAC3456

        
1

	
357

	
S=1716 I=93 E=0

	
3-isopropylmalate dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
NP_638674.1 lcl|leuB-XCC3328

        
1

	
357

	
S=1650 I=90 E=0

	
3-isopropylmalate dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
 lcl|leuB-XALc_0751

        
1

	
357

	
S=802 I=47 E=5.19396e-90

	
probable 3-isopropylmalate dehydrogenase protein

     	

   





    

        
            
                X.species
            
                
        
YP_362807.1 lcl|XCV1076

        
1

	
308

	
S=444 I=37 E=1.1372e-46

	
isocitrate dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
NP_636353.1 lcl|icd-XCC0967

        
1

	
308

	
S=441 I=37 E=2.67247e-46

	
isocitrate dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
NP_641393.1 lcl|icd-XAC1046

        
1

	
308

	
S=440 I=36 E=3.6261e-46

	
isocitrate dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_0579

        
1

	
295

	
S=439 I=39 E=4.09686e-46

	
putative isocitrate dehydrogenase protein

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_3137

        
2

	
357

	
S=404 I=33 E=7.45194e-42

	
putative isocitrate dehydrogenase protein

     	

   





    

        
                pubmed
        
        

        
1

	
357

	
S=1466 I=78 E=7.21908e-169

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Manganese Metal-binding NAD Oxi

	
Pubmed 9108278

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
357

	
S=1313 I=74 E=2.09643e-150

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Manganese Metal-binding NAD Oxidoreducta

	
Pubmed 9108283

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
357

	
S=1097 I=61 E=2.98449e-124

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Manganese Metal-binding NAD Oxidoreduct

	
Pubmed 12754231

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
310

	
S=1064 I=65 E=3.60349e-120

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Manganese Metal-binding NAD Oxidoreducta

	
Pubmed 8190068

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
357

	
S=1027 I=58 E=8.89342e-116

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Metal-binding NAD Oxidoreductase

	
Pubmed 8282728,9739088

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
354

	
S=1011 I=56 E=8.06663e-114

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Branched-chain amino acid biosynthesis Leucine Metal-binding NAD Oxidoreductase

	
Pubmed 16758443

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
357

	
S=976 I=55 E=1.42939e-109

	
3-isopropylmalate dehydrogenase, chloroplastic EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Leucine Magnesium Manganese Metal-binding NAD Oxidoreductase

	
Pubmed 1371407

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
357

	
S=947 I=54 E=5.22699e-106

	
3-isopropylmalate dehydrogenase 3, chloroplastic EC=1.1.1.85 ; Alternative splicing Amino-acid biosynthesis Branched-chain Leucine Magnesium M

	
Pubmed 9501997

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
357

	
S=944 I=52 E=1.15564e-105

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Manganese Metal-binding NAD Oxid

	
Pubmed 3110742,8969504

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
357

	
S=925 I=52 E=2.27743e-103

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Manganese Metal-binding NAD Oxi

	
Pubmed 8336106

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
357

	
S=1722 I=93 E=0

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Manganese Metal-binding NAD Oxidoreduct

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
357

	
S=1716 I=93 E=0

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Manganese Metal-binding NAD Oxidoreduct

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
357

	
S=1706 I=92 E=0

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Manganese Metal-binding NAD Oxidoreduct

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
357

	
S=1706 I=92 E=0

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Manganese Metal-binding NAD Oxidoreductase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
357

	
S=1650 I=90 E=0

	
3-isopropylmalate dehydrogenase EC=1.1.1.85 ; Amino-acid biosynthesis Branched-chain Cytoplasm Leucine Magnesium Manganese Metal-binding NAD Oxidoreduct

	

    

    

         
        
prodomImg

    





    

        
            
                
            
                
        
PDA1F709

        
133

	
208

	
S=264 I=65 E=1.60247e-24

    	
    





    

        
            
                
            
                
        
PD186037

        
207

	
268

	
S=236 I=73 E=3.65949e-21

    	
    





    

        
            
                
            
                
        
PDA92835

        
7

	
202

	
S=153 I=28 E=5.18848e-11

    	
    





    

        
            
                
            
                
        
PDA0U7O8

        
305

	
357

	
S=134 I=51 E=8.89361e-09

    	
    





    

        
            
                
            
                
        
PDA188O9

        
263

	
304

	
S=117 I=57 E=1.11379e-06

    	
    





    

        
            
                
            
                
        
PDA1H4A2

        
109

	
134

	
S=116 I=88 E=1.29173e-06

    	
    





    

        
            
                
            
                
        
PDA7L670

        
109

	
134

	
S=106 I=77 E=2.06672e-05

    	
    





    

        
            
                
            
                
        
PDA7L681

        
109

	
134

	
S=106 I=77 E=2.39691e-05

    	
    





    

        
            
                
            
                
        
PDA1F708

        
4

	
53

	
S=103 I=46 E=4.81473e-05

    	
    





    

        
            
                
            
                
        
PDA7L687

        
109

	
134

	
S=103 I=77 E=5.53549e-05

    	
    




Show or not Suggestions
Suggest an annotation


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ID


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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            262 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            364 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            1 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                0 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11910.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11910.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11910.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11910.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






leuA XFF4834R_chr11920




    

         
             
            XFF4834R_chr11910
            
XFF4834R_chr11910
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr11930
            
XFF4834R_chr11930
            
        		

    





    

        ID
        leuA
    

    

        AC
        XFF4834R_chr11920
    

    

        LT
        XFF4834R_chr11920
    

    

        OR
        XFF4834R_chr from 1338907 to 1340469 on strand -
    

   

        DE
        2-isopropylmalate synthase
  

   

        IP
        Alpha-isopropylmalate/homocitrate synthase, conserved site; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
  
  
  
  

        CL
        1.5.1.19 Leucine	GO:0009098 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: leucine biosynthetic process (GO:0009098)
Biological Process: carboxylic acid metabolic process (GO:0019752)
Biological Process: metabolic process (GO:0008152)
Molecular Function: 2-isopropylmalate synthase activity (GO:0003852)
Molecular Function: catalytic activity (GO:0003824)
acyl groups converted into alkyl on transfer (GO:0046912)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [E] Amino acid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by darrasse (20120326)
  

  
  


    

        MW
        56332.1 Da
    


    

        SQ
        520 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MNTTVSNQTPRIRIFDTTLRDGEQSPGCSMTPQQKLVMARALDELGVDII
ETGFPASSHSDREAVAMMGRELRRPTLAVLSRCLQADIETSAKALETAAN
PRLHVFLSTSPLHREHKLRMSREQVLESVHRHVTLARGYIDDVEFSAEDA
TRTEEDFLAEVTRVAIAAGATTINLPDTVGFTTPEEIRGMFSRLIASVEG
ADKVIFSAHCHNDLGLAVANSLAAIEGGARQVECTINGIGERAGNCALEE
ITMALKVRGAFYNIDSAINTPRIVSTSQLLQRLVGMPVQRNKAVVGGNAF
AHESGIHQHGMLRHRGTYEIMRPEDVGWESSQMVLGRHSGRAAVEQRLRA
LGYLLEEEEVKLVFEQFKALCEKQRVVTDADLQALMQDATVQEGYRLASM
TISDVGSRANALVELSDPEGNRVAETAQGNGPVDALFGALASATGVKLEL
DSYQVHSVGIGADARGEASLSVRHDGVEYEGTGTSKDIIEASALAWLDVA
NRLLRQRERGVVASKTAAVA

    






    

        Hamap
        LEU1_MF_01025_B
	raw_score=14302 norm_score=43.729
	
2-isopropylmalate synthase [leuA].

    





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr19960 lcl|XFF4834R_chr21420968_2290864_r3_XFF4834R-XFF4834R_chr19960

        
137

	
285

	
S=109 I=28 E=1.61302e-06

	

     	

   





    

        
            
                X.species
            
                
        
YP_365314.1 lcl|leuA-XCV3583

        
1

	
520

	
S=2650 I=97 E=0

	
2-isopropylmalate synthase

     	

   





    

        
            
                X.species
            
                
        
NP_643762.1 lcl|leuA-XAC3455

        
1

	
520

	
S=2649 I=97 E=0

	
2-isopropylmalate synthase

     	

   





    

        
            
                X.species
            
                
        
NP_638673.1 lcl|leuA-XCC3327

        
1

	
520

	
S=2592 I=94 E=0

	
2-isopropylmalate synthase

     	

   





    

        
            
                X.species
            
                
        
 lcl|leuA-XALc_0755

        
1

	
517

	
S=2206 I=80 E=0

	
probable 2-isopropylmalate synthase protein

     	

   





    

        
            
                X.species
            
                
        
NP_637197.1 lcl|mvaB-XCC1832

        
12

	
285

	
S=114 I=24 E=1.51031e-06

	
hydroxymethylglutaryl-CoA lyase

     	

   





    

        
            
                X.species
            
                
        
NP_642177.1 lcl|mvaB-XAC1851

        
137

	
285

	
S=114 I=28 E=1.79802e-06

	
hydroxymethylglutaryl-CoA lyase

     	

   





    

        
            
                X.species
            
                
        
YP_363628.1 lcl|mvaB-XCV1897

        
167

	
285

	
S=109 I=30 E=6.36558e-06

	
hydroxymethylglutaryl-CoA lyase

     	

   





    

        
            
                X.species
            
                
        
 lcl|mvaB-XALc_1332

        
158

	
285

	
S=102 I=30 E=4.64688e-05

	
probable hydroxymethylglutaryl-coa lyase protein

     	

   





    

        
                pubmed
        
        

        
51

	
472

	
S=1911 I=85 E=0

	
LeuA

	
Pubmed 18424531

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
52

	
472

	
S=1908 I=85 E=0

	
LeuA

	
Pubmed 18424531

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
51

	
471

	
S=1906 I=85 E=0

	
LeuA

	
Pubmed 18424531

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
52

	
472

	
S=1905 I=85 E=0

	
LeuA

	
Pubmed 18424531

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
52

	
471

	
S=1902 I=85 E=0

	
LeuA

	
Pubmed 18424531

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
51

	
470

	
S=1901 I=85 E=0

	
LeuA

	
Pubmed 18424531

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
53

	
472

	
S=1900 I=85 E=0

	
LeuA

	
Pubmed 18424531

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
52

	
470

	
S=1899 I=85 E=0

	
LeuA

	
Pubmed 18424531

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
52

	
470

	
S=1897 I=84 E=0

	
LeuA

	
Pubmed 18424531

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
54

	
472

	
S=1895 I=84 E=0

	
LeuA

	
Pubmed 18424531

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
520

	
S=2649 I=97 E=0

	
2-isopropylmalate synthase EC=2.3.3.13 ; Amino-acid biosynthesis Branched-chain Leucine Transferase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
520

	
S=2592 I=94 E=0

	
2-isopropylmalate synthase EC=2.3.3.13 ; Amino-acid biosynthesis Branched-chain Leucine Transferase

	

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR013785
	[G3DSA:3.20.20.70]
	
4

	
284

	
	
Aldolase-type TIM barrel

    





    

        Iprscan
        IPR000891
	[PF00682]
	
20

	
286

	
	
Pyruvate carboxyltransferase

    





    

        Iprscan
        IPR013709
	[PF08502]
	
376

	
504

	
	
2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain

    





    

        Iprscan
        IPR005671
	[TIGR00973]
	
11

	
501

	
	
Bacterial 2-isopropylmalate synthase

    





    

        Iprscan
        IPR002034
	[PS00815]
	
19

	
35

	
	
Alpha-isopropylmalate/homocitrate synthase, conserved site

    





    

        Iprscan
        IPR002034
	[PS00816]
	
206

	
219

	
	
Alpha-isopropylmalate/homocitrate synthase, conserved site

    





    

        Iprscan
        IPR000891
	[PS50991]
	
12

	
274

	
	
Pyruvate carboxyltransferase

    





    

        Iprscan
        
	[seg]
	
355

	
368

	
	
-

    





    

        
            
                
            
                
        
PD327958

        
11

	
292

	
S=527 I=46 E=3.26576e-56

    	
    





    

        
            
                
            
                
        
PD411944

        
282

	
352

	
S=213 I=59 E=3.24759e-18

    	
    





    

        
            
                
            
                
        
PD957435

        
158

	
253

	
S=172 I=40 E=2.9383e-13

    	
    





    

        
            
                
            
                
        
PDA9G1M3

        
12

	
251

	
S=158 I=30 E=1.64992e-11

    	
    





    

        
            
                
            
                
        
PD002462

        
416

	
504

	
S=154 I=41 E=4.23062e-11

    	
    





    

        
            
                
            
                
        
PD451739

        
12

	
184

	
S=135 I=26 E=9.66935e-09

    	
    





    

        
            
                
            
                
        
PDA5J5W1

        
77

	
196

	
S=122 I=31 E=3.63566e-07

    	
    





    

        
            
                
            
                
        
PD001803

        
12

	
46

	
S=113 I=60 E=4.10423e-06

    	
    





    

        
            
                
            
                
        
PD829322

        
18

	
116

	
S=106 I=31 E=3.29766e-05

    	
    





    

        
            
                
            
                
        
PD385158

        
102

	
157

	
S=105 I=41 E=3.69344e-05

    	
    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            146 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            205 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            1 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            1 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                8 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11920.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11920.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11920.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgadIMh/XFF4834R_chr11920.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    •