Xanthomonas fuscans subsp. fuscans

8 hits

  1. XFF4834R_chr04650trpEXFF4834R_chr04650probable anthranilate synthase component I
  2. XFF4834R_chr04770trpGXFF4834R_chr04770probable anthranilate synthase component II
  3. XFF4834R_chr04790trpDXFF4834R_chr04790putative anthranilate phosphoribosyl transferase
  4. XFF4834R_chr04800trpCXFF4834R_chr04800indole-3-glycerolphosphate synthetase
  5. XFF4834R_chr09420wrbAXFF4834R_chr09420putative flavoprotein WrbA (Trp repressor binding protein)
  6. XFF4834R_chr27120trpAXFF4834R_chr27120probable tryptophan synthase subunit alpha
  7. XFF4834R_chr27140trpBXFF4834R_chr27140probable tryptophan synthase subunit beta
  8. XFF4834R_chr27160trpFXFF4834R_chr27160probable N-(5'-phosphoribosyl)anthranilate isomerase

trpE XFF4834R_chr04650
XFF4834R_chr_0515
XFF4834R_chr_0515 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Framed OrthoMCL XFF4834R_chr04660
XFF4834R_chr04660
ID trpE
AC XFF4834R_chr04650
LT XFF4834R_chr04650
OR XFF4834R_chr from 533041 to 534516 on strand +
DE probable anthranilate synthase component I
IP Anthranilate synthase component I; Anthranilate synthase, clad 3; Chorismate binding, C-terminal
CL 1.5.1.15 Tryptophan GO:0000162
EC
GO InterPro
Biological Process: biosynthetic process (GO:0009058)
Biological Process: tryptophan biosynthetic process (GO:0000162)
Molecular Function: anthranilate synthase activity (GO:0004049)
Molecular Function: oxo-acid-lyase activity (GO:0016833)

Curated
PM
AN
CC COG: [EH] Amino acid transport and metabolism;Coenzyme transport and metabolism;
CC MODEL: acur
CC STATUS: curated by darrasse (20110304)
MW 54191 Da
SQ 491 aa
  
........10........20........30........40........50
         |         |         |         |         |
MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESV
EGGERFGRYSIIGLPARRVYSFRARTLEVSEHGEVVETREVADPLAEVDA
LRAEHSVPQLEGLPGFTGGLVGWFGFECIQYIEPRLGSGDKPDELGTPDI
LLMLSEELAVFDNLKGRLYLIVHADPRQPQAYVRANRRLDELAHRLRQGG
AGYPQAQISDAIDEADFHSSFAREEYHAVVRKAQEYVRAGDIFQVVPSQR
LRVPFRARPVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGV
VTVRPIAGTRPRGATPELDKALEAELLADPKERAEHVMLIDLGRNDVGRV
AEPGTVKVGEQFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTV
SGAPKIRALEIIRELEPVKRNVYSGAVGYIGWHGDADTAIAIRTAVIQDG
YLYVQAGGGVVYDSDPDLEWQETMNKGRALFRAVAQAAKGL

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr11230 lcl|XFF4834R_chr11690667_1255022_f3_XFF4834R-XFF4834R_chr11230

        
18

	
486

	
S=507 I=34 E=9.78424e-55

	

     	

   





    

        
            
                XFF4834R
            
                
        
NP_640831.1 lcl|trpE-XAC0476

        
1

	
491

	
S=2427 I=96 E=0

	
anthranilate synthase component I

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362236.1 lcl|trpE-XCV0505

        
1

	
491

	
S=2421 I=96 E=0

	
anthranilate synthase component I

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635853.1 lcl|trpE-XCC0459

        
1

	
491

	
S=2420 I=95 E=0

	
anthranilate synthase component I

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|trpE-XALc_0279

        
1

	
491

	
S=1902 I=75 E=0

	
probable anthranilate synthase componentIprotein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_641467.1 lcl|trpE-XAC1130

        
18

	
486

	
S=527 I=34 E=1.4838e-56

	
hypothetical protein

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362880.1 lcl|trpE-XCV1149

        
20

	
486

	
S=524 I=34 E=3.14061e-56

	
hypothetical protein

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_0629

        
230

	
484

	
S=499 I=44 E=3.69717e-53

	
putative anthranilate synthase componentIprotein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_636397.1 lcl|trpE-XCC1021

        
224

	
487

	
S=487 I=43 E=1.00683e-51

	
hypothetical protein

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|albXVII-XALc_1519

        
95

	
484

	
S=443 I=30 E=2.43986e-46

	
putative para-aminobenzoate synthase;albicidin synthetase protein

     	

   





    

        
                pubmed
        
        

        
2

	
480

	
S=1411 I=57 E=4.03564e-162

	
Anthranilate synthase component 1 EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Lyase Tryptophan

	
Pubmed 1987141

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
489

	
S=1379 I=55 E=3.34923e-158

	
Anthranilate synthase component 1 EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Lyase Tryptophan

	
Pubmed 2404959

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
491

	
S=1364 I=56 E=2.20023e-156

	
Anthranilate synthase component 1 EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Lyase Tryptophan

	
Pubmed 2105306

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
491

	
S=1314 I=53 E=2.60628e-150

	
Anthranilate synthase component 1 EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Lyase Tryptophan

	
Pubmed 10417653

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
491

	
S=1307 I=53 E=1.93605e-149

	
Anthranilate synthase component 1 EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Lyase Tryptophan

	
Pubmed 10417653

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
491

	
S=1285 I=53 E=8.00557e-147

	
Anthranilate synthase component I

	
Pubmed 12754231

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
491

	
S=1266 I=53 E=1.78248e-144

	
Anthranilate synthase component 1 EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Lyase Tryptophan

	
Pubmed 10417653

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
491

	
S=1266 I=53 E=1.78248e-144

	
Anthranilate synthase component 1 EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Lyase Tryptophan

	
Pubmed 10417653

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
491

	
S=1193 I=48 E=1.06695e-135

	
Anthranilate synthase component 1 EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Lyase Tryptophan

	
Pubmed 2338941

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
491

	
S=1178 I=52 E=7.58133e-134

	
Anthranilate synthase component I EC=4.1.3.27 Anthranilate synthase large subunit EC=4.1.3.27 ; Lyase

	
Pubmed 12694904

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|P21689|TRPE_PSESS

        
2

	
480

	
S=1411 I=57 E=2.77616e-162

	
Anthranilate synthase component 1 EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Lyase Tryptophan

    





    

        Iprscan
        IPR005801
	[G3DSA:3.60.120.10]
	
11

	
484

	
	
ADC synthase

    





    

        Iprscan
        IPR006805
	[PF04715]
	
20

	
170

	
	
Anthranilate synthase component I, N-terminal

    





    

        Iprscan
        IPR015890
	[PF00425]
	
222

	
484

	
	
Chorismate binding, C-terminal

    





    

        Iprscan
        IPR005256
	[TIGR00564]
	
26

	
485

	
	
Anthranilate synthase component I

    





    

        Iprscan
        
	[seg]
	
316

	
332

	
	
-

    





    

        
            
                
            
                
        
PD000779

        
106

	
487

	
S=927 I=48 E=1.0674e-104

    	
    





    

        
            
                
            
                
        
PD176622

        
117

	
171

	
S=221 I=67 E=3.14282e-19

    	
    





    

        
            
                
            
                
        
PD875326

        
75

	
116

	
S=177 I=81 E=7.68274e-14

    	
    





    

        
            
                
            
                
        
PDA694X9

        
117

	
147

	
S=170 I=97 E=4.51e-13

    	
    





    

        
            
                
            
                
        
PDA0Y7I6

        
169

	
214

	
S=166 I=67 E=1.74215e-12

    	
    





    

        
            
                
            
                
        
PDA1T917

        
1

	
28

	
S=142 I=100 E=1.36137e-09

    	
    





    

        
            
                
            
                
        
PDA078Y1

        
21

	
175

	
S=135 I=29 E=9.76618e-09

    	
    





    

        
            
                
            
                
        
PD820588

        
172

	
241

	
S=126 I=44 E=9.50611e-08

    	
    





    

        
            
                
            
                
        
PD105823

        
29

	
69

	
S=126 I=61 E=1.17187e-07

    	
    





    

        
            
                
            
                
        
PDA2N0A9

        
389

	
444

	
S=106 I=39 E=2.79772e-05

    	
    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            182 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            95 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            2 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                12 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04650.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04650.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04650.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04650.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






trpG XFF4834R_chr04770




    

         
             
            XFF4834R_chr04760
            
XFF4834R_chr04760
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr04780
            
XFF4834R_chr04780
            
        		

    





    

        ID
        trpG
    

    

        AC
        XFF4834R_chr04770
    

    

        LT
        XFF4834R_chr04770
    

    

        OR
        XFF4834R_chr from 544145 to 544723 on strand +
    

   

        DE
        probable anthranilate synthase component II
  

   

        IP
        Glutamine amidotransferase class-I, C-terminal; Carbamoyl phosphate synthase, GATase region; Anthranilate synthase component II/delta crystallin; Glutamine amidotransferase of anthranilate synthase
  
  
  
  

        CL
        1.5.1.15 Tryptophan	GO:0000162 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: biosynthetic process (GO:0009058)
Biological Process: metabolic process (GO:0008152)
Biological Process: glutamine metabolic process (GO:0006541)
Molecular Function: anthranilate synthase activity (GO:0004049)
Molecular Function: catalytic activity (GO:0003824)


            Curated

        		
    


  

        PM
        
    

  

        AN
        interpro domains and pubmed hit correspond to a probable anthranilate synthase component II, which is encoded by a trpG gene in Pseudomonas. In E. coli trpGD is a fused fused glutamine amidotransferase (component II) of anthranilate synthase -!- anthranilate phosphoribosyl transferase, furthermore the gene pabA shares high homology with XFF4834R_chr04770 but does not have the same function (aminodeoxychorismate synthase, subunit II). A comparison of the nucleotide and amino acid sequences of pabA and trp(G) D reveals extensive homology, suggesting that these two genes arose from a common ancestor. pabA and trp(G) D are 44% homologous at the amino acid level and 53% homologous at the nucleotide sequence level. The nucleotide sequences can be divided into regions of high homology, in which most nucleotide changes occur in the third position of codons and do not effect the amino acid sequence, and regions which show almost no DNA homology. Divergence in these non-homologous regions appears to have resulted from single-base substitutions as well as the rearrangement of small regions of DNA by inversion, deletion and duplication.
    

  

        CC
        COG: [EH] Amino acid transport and metabolism;Coenzyme transport and metabolism; 
    

    

        CC
        MODEL: acur 
  
    
  

        CC
        STATUS: curated by darrasse (20120321)
  

  
  


    

        MW
        21102 Da
    


    

        SQ
        192 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MLLMLDNYDSFTYNLVQYLQALGAEVTVVRNDAMSVDQIAALKPERIVIS
PGPCTPNEAGISLQLIERLGQTTPILGVCLGHQSIGQVYGGDVIRAGNIM
HGKTSPIRHQGKGVFAGLPDSYEATRYHSLVVDKTTLPDALEVTAWTENP
DGSMEEIMGLRHRQFPVEGVQFHPESILTQHGHALLKNFLQR

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr20060 lcl|carA-XFF4834R_chr20060

        
8

	
176

	
S=142 I=28 E=5.69001e-11

	
carbamoyl phosphate synthetase small subunit, glutamine amidotransferase

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr22900 lcl|guaA-XFF4834R_chr22900

        
2

	
190

	
S=123 I=26 E=9.66862e-09

	
GMP synthetase (glutamine aminotransferase)

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr20060 lcl|carA-XFF4834R_chr20060

        
8

	
176

	
S=142 I=28 E=5.69001e-11

	
carbamoyl phosphate synthetase small subunit, glutamine amidotransferase

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr22900 lcl|guaA-XFF4834R_chr22900

        
2

	
190

	
S=123 I=26 E=9.66862e-09

	
GMP synthetase (glutamine aminotransferase)

     	

   





    

        
                pubmed
        
        

        
1

	
192

	
S=729 I=69 E=5.30408e-80

	
Anthranilate synthase component II EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Glutamine amidotransferase Lyase Tryptophan

	
Pubmed 2105306

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
192

	
S=706 I=66 E=3.05473e-77

	
Anthranilate synthase component II EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Glutamine amidotransferase Lyase Tryptophan

	
Pubmed 2404959,659439

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
192

	
S=658 I=61 E=2.00007e-71

	
Para-aminobenzoate synthase glutamine amidotransferase component II EC=2.6.1.85 ; Folate biosynthesis

	
Pubmed 3894673,2403545

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
192

	
S=648 I=64 E=3.37188e-70

	
Glutamine amidotransferase

	
Pubmed 18291316,17400768

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
191

	
S=647 I=58 E=4.496e-70

	
Anthranilate synthase component 2 EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Glutamine amidotransferase Lyase Tryptophan

	
Pubmed 6599977

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
192

	
S=645 I=62 E=6.54103e-70

	
Para-aminobenzoate synthase glutamine amidotransferase component II EC=2.6.1.85 ; Folate biosynthesis

	
Pubmed 3894673

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
192

	
S=638 I=61 E=5.98989e-69

	
Para-aminobenzoate synthase glutamine amidotransferase component II EC=2.6.1.85 ; Folate biosynthesis

	
Pubmed 6350604,2403545

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
192

	
S=615 I=60 E=3.33146e-66

	
Para-aminobenzoate synthase glutamine amidotransferase component II EC=2.6.1.85 ; Folate biosynthesis

	
Pubmed 3894673

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
190

	
S=610 I=60 E=1.15906e-65

	
Anthranilate synthase component II

	
Pubmed 10511537

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
192

	
S=610 I=58 E=1.36788e-65

	
Anthranilate synthase component II

	
Pubmed 12754231

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|P20576|TRPG_PSEAE

        
1

	
192

	
S=729 I=69 E=3.6768e-80

	
Anthranilate synthase component II EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Glutamine amidotransferase Lyase Tryptophan

    





    

        
            
                sp_Pdown
            
        
        
sp|P00901|TRPG_PSEPU

        
1

	
192

	
S=706 I=66 E=2.11754e-77

	
Anthranilate synthase component II EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Glutamine amidotransferase Lyase Tryptophan

    





    

        
            
                sp_Pdown
            
        
        
sp|P06193|PABA_SALTY

        
1

	
192

	
S=658 I=61 E=1.38645e-71

	
Para-aminobenzoate synthase glutamine amidotransferase component II EC=2.6.1.85 ; Folate biosynthesis

    





    

        
            
                sp_Pdown
            
        
        
sp|P00902|TRPG_ACIAD

        
1

	
191

	
S=647 I=58 E=3.11664e-70

	
Anthranilate synthase component 2 EC=4.1.3.27 ; Amino-acid biosynthesis Aromatic Glutamine amidotransferase Lyase Tryptophan

    





    

        
            
                sp_Pdown
            
        
        
sp|P06195|PABA_SERMA

        
1

	
192

	
S=645 I=62 E=4.53426e-70

	
Para-aminobenzoate synthase glutamine amidotransferase component II EC=2.6.1.85 ; Folate biosynthesis

    





    

        Iprscan
        IPR006220
	[PR00097]
	
2

	
16

	
	
Anthranilate synthase component II/delta crystallin

    





    

        Iprscan
        IPR006220
	[PR00097]
	
47

	
56

	
	
Anthranilate synthase component II/delta crystallin

    





    

        Iprscan
        IPR006220
	[PR00097]
	
74

	
85

	
	
Anthranilate synthase component II/delta crystallin

    





    

        Iprscan
        IPR006220
	[PR00097]
	
99

	
107

	
	
Anthranilate synthase component II/delta crystallin

    





    

        Iprscan
        IPR006220
	[PR00097]
	
119

	
131

	
	
Anthranilate synthase component II/delta crystallin

    





    

        Iprscan
        IPR006220
	[PR00097]
	
169

	
182

	
	
Anthranilate synthase component II/delta crystallin

    





    

        Iprscan
        IPR011702
	[PR00096]
	
47

	
56

	
	
Glutamine amidotransferase superfamily

    





    

        Iprscan
        IPR011702
	[PR00096]
	
74

	
85

	
	
Glutamine amidotransferase superfamily

    





    

        Iprscan
        IPR011702
	[PR00096]
	
169

	
182

	
	
Glutamine amidotransferase superfamily

    





    

        Iprscan
        IPR001317
	[PR00099]
	
44

	
58

	
	
Carbamoyl phosphate synthase, GATase domain

    





    

        Iprscan
        IPR001317
	[PR00099]
	
74

	
90

	
	
Carbamoyl phosphate synthase, GATase domain

    





    

        Iprscan
        
	[G3DSA:3.40.50.880]
	
2

	
190

	
	
-

    





    

        Iprscan
        
	[PTHR11922]
	
1

	
192

	
	
-

    





    

        Iprscan
        IPR000991
	[PF00117]
	
4

	
190

	
	
Glutamine amidotransferase class-I, C-terminal

    





    

        Iprscan
        IPR006221
	[TIGR00566]
	
1

	
192

	
	
Glutamine amidotransferase of anthranilate synthase

    





    

        
            
                
            
                
        
PD095787

        
127

	
192

	
S=185 I=54 E=6.61442e-15

    	
    





    

        
            
                
            
                
        
PD095731

        
74

	
133

	
S=173 I=51 E=1.81704e-13

    	
    





    

        
            
                
            
                
        
PD629602

        
1

	
58

	
S=151 I=52 E=7.25593e-11

    	
    





    

        
            
                
            
                
        
PDA1F790

        
28

	
63

	
S=145 I=69 E=4.11346e-10

    	
    





    

        
            
                
            
                
        
PD002064

        
1

	
28

	
S=123 I=82 E=1.92173e-07

    	
    





    

        
            
                
            
                
        
PDA1U3F9

        
105

	
131

	
S=109 I=74 E=9.88994e-06

    	
    





    

        
            
                
            
                
        
PD689301

        
105

	
131

	
S=106 I=67 E=2.34454e-05

    	
    





    

        
            
                
            
                
        
PDA5I8P3

        
109

	
147

	
S=102 I=49 E=6.50248e-05

    	
    





    

        Iprscan
        
	[SSF52317]
	
1

	
191

	
	
-

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            327 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            0 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            3 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                16 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04770.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04770.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04770.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04770.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






trpD XFF4834R_chr04790




    

         
             
            XFF4834R_chr04780
            
XFF4834R_chr04780
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr04800
            
XFF4834R_chr04800
            
        		

    





    

        ID
        trpD
    

    

        AC
        XFF4834R_chr04790
    

    

        LT
        XFF4834R_chr04790
    

    

        OR
        XFF4834R_chr from 545614 to 546651 on strand +
    

   

        DE
        putative anthranilate phosphoribosyl transferase
  

   

        IP
        Anthranilate phosphoribosyl transferase; AMP phosphorylase
  
  
  
  

        CL
        1.5.1.15 Tryptophan	GO:0000162 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: metabolic process (GO:0008152)
Biological Process: tryptophan biosynthetic process (GO:0000162)
Molecular Function: anthranilate phosphoribosyltransferase activity (GO:0004048)
transferring glycosyl groups (GO:0016757)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [E] Amino acid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by darrasse (20120319)
  

  
  


    

        MW
        36610.8 Da
    


    

        SQ
        345 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MPITPQEALQRTIEHREIFHDEMVELMRQIMRGEVSDMMVAAILTGLRVK
KETIGEIAGAATVMREFSRRVDVADRQHMVDIVGTGGDGSHTFNISTCAM
FVAAAGGANVAKHGNRSVSSKSGSADALEALGAVIELQPEQVASALAHTG
IGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGPLTNPAGSPNILMGVFH
PDLVGIQARVLQELGAERALVVWGRDGMDELSLGAGTLVGELRDGQVREY
EVHPEDFGIAMSASRNLKVADAAQSRAMLLQVLDNVPGPALDIVALNAGA
ALYVAGIADSIADGVLRARAVIADGSARARVDAYIAYTRQLAVQP

    






    

        Hamap
        TRPD_MF_00211
	raw_score=6670 norm_score=36.383
	
Anthranilate phosphoribosyltransferase [trpD].

    





    

        
            
                XFF4834R
            
                
        
NP_640835.1 lcl|trpD-XAC0480

        
1

	
345

	
S=1770 I=99 E=0

	
anthranilate phosphoribosyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362247.1 lcl|trpD-XCV0516

        
1

	
344

	
S=1691 I=98 E=0

	
anthranilate phosphoribosyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635863.1 lcl|trpD-XCC0469

        
1

	
344

	
S=1616 I=92 E=0

	
anthranilate phosphoribosyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|trpD-XALc_0282

        
1

	
341

	
S=1464 I=88 E=3.17322e-170

	
probable anthranilate phosphoribosyltransferase protein

     	

   





    

        
                pubmed
        
        

        
1

	
341

	
S=1310 I=73 E=5.49786e-150

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

	
Pubmed 12754231

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
8

	
338

	
S=745 I=48 E=1.26402e-81

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

	
Pubmed 2105306

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
6

	
341

	
S=740 I=44 E=5.81291e-81

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

	
Pubmed 6599977

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
6

	
339

	
S=727 I=44 E=1.96853e-79

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

	
Pubmed 17563350

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
6

	
344

	
S=720 I=45 E=1.47511e-78

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

	
Pubmed 2404959

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
17

	
339

	
S=671 I=45 E=1.19062e-72

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

	
Pubmed 9061023

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
9

	
322

	
S=646 I=44 E=1.27343e-69

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

	
Pubmed 10369778

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
9

	
332

	
S=632 I=42 E=7.46919e-68

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

	
Pubmed 3924737,6425119

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
6

	
335

	
S=632 I=41 E=7.73428e-68

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

	
Pubmed 18391199

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
6

	
324

	
S=627 I=44 E=2.64434e-67

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

	
Pubmed 2113923

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PQ48|TRPD_XANAC

        
1

	
345

	
S=1770 I=99 E=0

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

    





    

        
            
                sp_Pdown
            
        
        
sp|Q3BYB6|TRPD_XANC5

        
1

	
344

	
S=1691 I=98 E=0

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

    





    

        
            
                sp_Pdown
            
        
        
sp|B2SL02|TRPD_XANOP

        
1

	
345

	
S=1652 I=95 E=0

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

    





    

        
            
                sp_Pdown
            
        
        
sp|Q2NYD6|TRPD_XANOM

        
1

	
345

	
S=1652 I=95 E=0

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PD71|TRPD_XANCP

        
1

	
344

	
S=1616 I=92 E=0

	
Anthranilate phosphoribosyltransferase EC=2.4.2.18 ; Amino-acid biosynthesis Aromatic Glycosyltransferase Tryptophan

    





    

        Iprscan
        IPR000312
	[G3DSA:3.40.1030.10]
	
74

	
340

	
	
Glycosyl transferase, family 3

    





    

        Iprscan
        IPR005940
	[MF_00211]
	
7

	
337

	
	
Anthranilate phosphoribosyl transferase

    





    

        Iprscan
        IPR017459
	[PF02885]
	
4

	
69

	
	
Glycosyl transferase, family 3, N-terminal

    





    

        Iprscan
        IPR000312
	[PF00591]
	
76

	
328

	
	
Glycosyl transferase, family 3

    





    

        Iprscan
        IPR005940
	[TIGR01245]
	
9

	
337

	
	
Anthranilate phosphoribosyl transferase

    





    

        
            
                
            
                
        
PD001864

        
79

	
344

	
S=556 I=49 E=7.58774e-60

    	
    





    

        
            
                
            
                
        
PDA2S2L8

        
128

	
271

	
S=152 I=29 E=6.61744e-11

    	
    





    

        
            
                
            
                
        
PD571708

        
15

	
73

	
S=138 I=53 E=2.76257e-09

    	
    





    

        
            
                
            
                
        
PDA6M9J1

        
1

	
21

	
S=116 I=100 E=1.26831e-06

    	
    





    

        
            
                
            
                
        
PD667263

        
267

	
341

	
S=113 I=38 E=3.57949e-06

    	
    





    

        
            
                
            
                
        
PDA2Y7R5

        
1

	
21

	
S=108 I=95 E=1.23454e-05

    	
    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            48 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            0 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            1 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                5 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04790.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04790.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04790.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04790.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






trpC XFF4834R_chr04800




    

         
             
            XFF4834R_chr04790
            
XFF4834R_chr04790
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr04810
            
XFF4834R_chr04810
            
        		

    





    

        ID
        trpC
    

    

        AC
        XFF4834R_chr04800
    

    

        LT
        XFF4834R_chr04800
    

    

        OR
        XFF4834R_chr from 546792 to 547589 on strand +
    

   

        DE
        indole-3-glycerolphosphate synthetase
  

   

        IP
        Aldolase-type TIM barrel; Indole-3-glycerol phosphate synthase
  
  
  
  

        CL
        1.5.1.15 Tryptophan	GO:0000162 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: tryptophan metabolic process (GO:0006568)
Biological Process: metabolic process (GO:0008152)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: indole-3-glycerol-phosphate synthase activity (GO:0004425)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [E] Amino acid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by darrasse (20120319)
  

  
  


    

        MW
        28795.6 Da
    


    

        SQ
        265 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MSDILNTILARKADEVAERSARVPLAELIARSADLPLTRGFAAAMQASIA
AGDPAVIAEVKKASPSKGVIRPDFQPADIAVSYEFGGATCLSVLTDVDFF
QGSDAYLRQARDACTLPVLRKDFTVDPYQVYEARVLGADCILLIVSALED
AQLADLSGLAMQLGLDVLVEVHDIDELERAVQVPVPLIGINNRNLRTFEV
TLQTTLDMRAAVPRDRVLVTESGIVTQADVQRMRSHDVNAFLVGETFMRA
AEPGESLRQLFFAHD

    






    

        
            
                XFF4834R
            
                
        
NP_640836.1 trpC-XAC0481

        
1

	
265

	
S=1362 I=100 E=4.58561e-158

	
indole-3-glycerol-phosphate synthase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362248.1 trpC-XCV0517

        
1

	
265

	
S=1357 I=100 E=1.65201e-157

	
indole-3-glycerol-phosphate synthase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635864.1 trpC-XCC0470

        
1

	
265

	
S=1227 I=92 E=1.05411e-141

	
indole-3-glycerol-phosphate synthase

     	

   





    

        
            
                XFF4834R
            
                
        
XALc_0283 trpC-XALc_0283

        
1

	
263

	
S=1071 I=80 E=8.34318e-123

	
probable indole-3-glycerol phosphate synthase protein

     	

   





    

        
                pubmed
        
        

        
4

	
262

	
S=854 I=65 E=6.72241e-95

	
Indole-3-glycerol phosphate synthase EC=4.1.1.48 ; Amino-acid biosynthesis Aromatic Decarboxylase Lyase Tryptophan

	
Pubmed 2105306

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
262

	
S=849 I=65 E=2.76019e-94

	
Indole-3-glycerol phosphate synthase EC=4.1.1.48 ; Amino-acid biosynthesis Aromatic Decarboxylase Lyase Tryptophan

	
Pubmed 2404959

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
261

	
S=736 I=56 E=1.22322e-80

	
Putative indole-3-glycerol phosphate synthase ; Amino-acid biosynthesis Aromatic Decarboxylase Lyase Tryptophan

	
Pubmed 19270136

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
262

	
S=695 I=58 E=1.31755e-75

	
Indole-3-glycerol phosphate synthase ; Amino-acid biosynthesis Aromatic Decarboxylase Lyase Tryptophan

	
Pubmed 12754231

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
261

	
S=685 I=53 E=1.80185e-74

	
Indole-3-glycerol phosphate synthase EC=4.1.1.48 ; Amino-acid biosynthesis Aromatic Decarboxylase Lyase Tryptophan

	
Pubmed 6599977

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PQ47|TRPC_XANAC

        
1

	
265

	
S=1362 I=100 E=1.28078e-156

	
Indole-3-glycerol phosphate synthase EC=4.1.1.48 ; Amino-acid biosynthesis Aromatic Decarboxylase Lyase Tryptophan

    





    

        
            
                sp_Pdown
            
        
        
sp|Q3BYB5|TRPC_XANC5

        
1

	
265

	
S=1357 I=100 E=4.61416e-156

	
Indole-3-glycerol phosphate synthase EC=4.1.1.48 ; Amino-acid biosynthesis Aromatic Decarboxylase Lyase Tryptophan

    





    

        
            
                sp_Pdown
            
        
        
sp|B2SL03|TRPC_XANOP

        
1

	
265

	
S=1342 I=98 E=3.45472e-154

	
Indole-3-glycerol phosphate synthase EC=4.1.1.48 ; Amino-acid biosynthesis Aromatic Decarboxylase Lyase Tryptophan

    





    

        
            
                sp_Pdown
            
        
        
sp|Q2NYD7|TRPC_XANOM

        
1

	
265

	
S=1339 I=98 E=8.33392e-154

	
Indole-3-glycerol phosphate synthase EC=4.1.1.48 ; Amino-acid biosynthesis Aromatic Decarboxylase Lyase Tryptophan

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PD70|TRPC_XANCP

        
1

	
265

	
S=1227 I=92 E=2.94418e-140

	
Indole-3-glycerol phosphate synthase EC=4.1.1.48 ; Amino-acid biosynthesis Aromatic Decarboxylase Lyase Tryptophan

    





    

        Iprscan
        IPR013785
	[G3DSA:3.20.20.70]
	
1

	
265

	
	
Aldolase-type TIM barrel

    





    

        Iprscan
        
	[PTHR22854:SF2]
	
3

	
264

	
	
-

    





    

        Iprscan
        
	[PTHR22854]
	
3

	
264

	
	
-

    





    

        Iprscan
        IPR013798
	[PF00218]
	
4

	
260

	
	
Indole-3-glycerol phosphate synthase

    





    

        Iprscan
        IPR001468
	[PS00614]
	
56

	
74

	
	
Indole-3-glycerol phosphate synthase, conserved site

    





    

        
            
                
            
                
        
PD001511

        
17

	
208

	
S=549 I=61 E=5.29006e-59

    	
    





    

        
            
                
            
                
        
PD551789

        
210

	
262

	
S=149 I=51 E=1.36122e-10

    	
    





    

        
            
                
            
                
        
PD240700

        
1

	
103

	
S=149 I=41 E=1.60646e-10

    	
    





    

        
            
                
            
                
        
PD812597

        
191

	
260

	
S=137 I=44 E=4.45174e-09

    	
    





    

        
            
                
            
                
        
PDA1V842

        
191

	
260

	
S=132 I=39 E=1.76521e-08

    	
    





    

        
            
                
            
                
        
PDA1F8L7

        
176

	
209

	
S=129 I=71 E=3.67167e-08

    	
    





    

        
            
                
            
                
        
PDA1V840

        
1

	
36

	
S=109 I=64 E=9.07684e-06

    	
    





    

        Iprscan
        IPR011060
	[SSF51366]
	
11

	
265

	
	
Ribulose-phosphate binding barrel

    




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Suggest an annotation


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ID


DE


EC


GO


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CL

 
  Your email  
 
  Validation code (copy this one XUYt7ATG)  
 
     



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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            113 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            404 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            1 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                6 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04800.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04800.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04800.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr04800.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






wrbA XFF4834R_chr09420




    

         
             
            XFF4834R_chr09410
            
XFF4834R_chr09410
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr09430
            
XFF4834R_chr09430
            
        		

    





    

        ID
        wrbA
    

    

        AC
        XFF4834R_chr09420
    

    

        LT
        XFF4834R_chr09420
    

    

        OR
        XFF4834R_chr from 1083593 to 1084189 on strand -
    

   

        DE
        putative flavoprotein WrbA (Trp repressor binding protein)
  

   

        IP
        Flavoprotein WrbA
  
  
  
  

        CL
        1.5.1.15 Tryptophan	GO:0000162 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: negative regulation of transcription (GO:0016481)
Molecular Function: FMN binding (GO:0010181)
Molecular Function: oxidoreductase activity (GO:0016491)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [R] General function prediction only; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by pieretti (20100504)
  

  
  


    

        MW
        20343 Da
    


    

        SQ
        198 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MAEILVLYYSRGGSVARLARQIARGIGEVPGMGARLRTVPPVAAVTQTSA
PPVPDEGAPYVDRADLAECNGLLLGSPTRFGNMAAPMKHFLDSLGAEWAS
GTLAGKPAGVFTSTASMHGGQESTLLSMHLPLLHHGCLIVGIPFTEAALS
HTTSGGTPYGASHVSGAGGDPQPSEDEALLARALGRRVADIARRLATP

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr36060 lcl|XFF4834R_chr39210420_4175989_f2_XFF4834R-XFF4834R_chr36060

        
1

	
141

	
S=99 I=26 E=9.10001e-06

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr36060 lcl|XFF4834R_chr39210420_4175989_f2_XFF4834R-XFF4834R_chr36060

        
1

	
141

	
S=99 I=26 E=9.10001e-06

	

     	

   





    

        
            
                XFF4834R
            
                
        
NP_641288.1 lcl|XAC0936-XAC0936

        
1

	
198

	
S=945 I=93 E=1.14629e-107

	
tryptophan repressor binding protein

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362698.1 lcl|wrbA-XCV0967

        
1

	
198

	
S=937 I=92 E=1.0497e-106

	
flavoprotein WrbA (Trp repressor binding protein)

     	

   





    

        
            
                XFF4834R
            
                
        
NP_636250.1 lcl|XCC0859

        
1

	
198

	
S=908 I=89 E=3.22431e-103

	
tryptophan repressor binding protein

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|wrbA-XALc_0479

        
1

	
196

	
S=793 I=80 E=3.02441e-89

	
probable flavoprotein wrba (trp repressor binding protein)

     	

   





    

        
            
                XFF4834R
            
                
        
NP_642549.1 lcl|XAC2232-XAC2232

        
2

	
177

	
S=160 I=31 E=1.44928e-12

	
repressor binding protein

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_2956

        
66

	
141

	
S=104 I=32 E=7.17289e-06

	
putative flavodoxin protein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_644016.2 lcl|wrbA-XAC3709

        
1

	
141

	
S=101 I=26 E=1.93801e-05

	
tryptophan repressor binding protein

     	

   





    

        
            
                XFF4834R
            
                
        
YP_365560.1 lcl|XCV3829

        
1

	
141

	
S=99 I=26 E=2.99696e-05

	
flavodoxin

     	

   





    

        
            
                XFF4834R
            
                
        
NP_639014.2 lcl|wrbA-XCC3668

        
1

	
141

	
S=97 I=27 E=5.66365e-05

	
tryptophan repressor binding protein

     	

   





    

        
                pubmed
        
        

        
1

	
196

	
S=718 I=75 E=1.18903e-78

	
WrbA

	
Pubmed 19218412

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
196

	
S=709 I=74 E=1.47738e-77

	
WrbA

	
Pubmed 19218412

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
177

	
S=540 I=60 E=4.79723e-57

	
Trp repressor binding protein

	
Pubmed 18194518

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
197

	
S=396 I=44 E=1.0276e-39

	
Para-benzoquinone reductase

	
Pubmed 19218392

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
195

	
S=380 I=43 E=9.00122e-38

	
Flavoprotein wrbA ; FMN

	
Pubmed 19077236

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
192

	
S=341 I=41 E=5.40593e-33

	
Flavoprotein wrbA 3 ; FMN Plasmid

	
Pubmed 11481432

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
195

	
S=339 I=41 E=8.3598e-33

	
Quinone reductase 2

	
Pubmed 16079999

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
195

	
S=331 I=35 E=8.80141e-32

	
AGG4 Flagellar flavodoxin ; Flagellum

	
Pubmed 16753570

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
195

	
S=330 I=38 E=1.29169e-31

	
Quinone-oxidoreductase QR2

	
Pubmed 11260494

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
195

	
S=330 I=39 E=1.32592e-31

	
Putative flavoprotein wrbA ; Acetylation FMN

	
Pubmed 10734605

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q0A961|WRBA_ALHEH

        
1

	
196

	
S=428 I=45 E=1.13822e-43

	
Flavoprotein wrbA ; FMN

    





    

        
            
                sp_Pdown
            
        
        
sp|A9AT43|WRBA_BURM1

        
1

	
197

	
S=422 I=44 E=5.32643e-43

	
Flavoprotein wrbA ; FMN

    





    

        
            
                sp_Pdown
            
        
        
sp|B4EPK7|WRBA_BURCJ

        
1

	
197

	
S=419 I=44 E=1.18794e-42

	
Flavoprotein wrbA ; FMN

    





    

        
            
                sp_Pdown
            
        
        
sp|A0KCF0|WRBA_BURCH

        
1

	
197

	
S=419 I=44 E=1.50325e-42

	
Flavoprotein wrbA ; FMN

    





    

        
            
                sp_Pdown
            
        
        
sp|B1KBY1|WRBA_BURCC

        
1

	
197

	
S=418 I=44 E=1.72828e-42

	
Flavoprotein wrbA ; FMN

    





    

        
            
                
            
                
        
PD099350

        
81

	
140

	
S=184 I=64 E=9.02873e-15

    	
    





    

        
            
                
            
                
        
PDA1Z1U6

        
36

	
80

	
S=152 I=64 E=6.74872e-11

    	
    





    

        
            
                
            
                
        
PDA3Z049

        
79

	
103

	
S=134 I=100 E=9.3839e-09

    	
    





    

        
            
                
            
                
        
PDA4X1X6

        
3

	
58

	
S=132 I=52 E=1.65389e-08

    	
    





    

        
            
                
            
                
        
PDA1L8T2

        
130

	
154

	
S=116 I=92 E=1.2383e-06

    	
    





    

        
            
                
            
                
        
PD769420

        
144

	
195

	
S=115 I=44 E=1.98288e-06

    	
    




Show or not Suggestions
Suggest an annotation


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ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
  Validation code (copy this one LAq4Piuy)  
 
     



Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            36 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            134 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            1 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                0 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr09420.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr09420.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr09420.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr09420.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






trpA XFF4834R_chr27120




    

         
             
            XFF4834R_chr27110
            
XFF4834R_chr27110
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr27130
            
XFF4834R_chr27130
            
        		

    





    

        ID
        trpA
    

    

        AC
        XFF4834R_chr27120
    

    

        LT
        XFF4834R_chr27120
    

    

        OR
        XFF4834R_chr from 3126433 to 3127239 on strand -
    

   

        DE
        probable tryptophan synthase subunit alpha
  

   

        IP
        Ribulose-phosphate binding barrel
  
  
  
  

        CL
        1.5.1.15 Tryptophan	GO:0000162 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: metabolic process (GO:0008152)
Biological Process: tryptophan metabolic process (GO:0006568)
Molecular Function: tryptophan synthase activity (GO:0004834)
Molecular Function: catalytic activity (GO:0003824)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [E] Amino acid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by darrasse (20120404)
  

  
  


    

        MW
        27995.5 Da
    


    

        SQ
        268 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MRRIDSCFAELRANGRKALIPFITAGDPSLEATVPVMHALVRAGADVIEL
GVPFSDPMADGPTIQRSSERALARGAGLAYVLEAVHEFRRDDATTPVVLM
GYLNPIEIHGTRRFAEAAVAAGVDGVLLVDLPPEEAGETRAIFTEVGLAL
IALASPTTSEQRLDMLCSTAQGYLYYVSFAGVTGASNLLDTHAASDRLRQ
LRQRAGAPVVAGFGIKDAASAAAMAVDADGVVVGSALVAALADAGEVRSA
RERAEAFLAPLRQALDQG

    






    

        
                pubmed
        
        

        
1

	
216

	
S=524 I=50 E=5.53188e-55

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

	
Pubmed 19077236

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
216

	
S=509 I=52 E=3.38925e-53

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

	
Pubmed 12754231

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
216

	
S=469 I=46 E=2.62109e-48

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

	
Pubmed 18700039

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
216

	
S=449 I=44 E=8.05777e-46

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

	
Pubmed 2503057

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
216

	
S=448 I=46 E=1.0108e-45

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

	
Pubmed 11092742

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
216

	
S=442 I=42 E=5.16108e-45

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

	
Pubmed 15547262

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
216

	
S=432 I=44 E=7.56805e-44

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

	
Pubmed 2828322

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
215

	
S=432 I=44 E=9.41124e-44

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

	
Pubmed 10511537

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
216

	
S=426 I=42 E=4.48158e-43

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

	
Pubmed 3127651

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
216

	
S=413 I=40 E=1.74487e-41

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

	
Pubmed 8423001

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q3BRL7|TRPA_XANC5

        
1

	
267

	
S=1106 I=83 E=1.23548e-125

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PJ29|TRPA_XANAC

        
1

	
268

	
S=1098 I=82 E=1.17154e-124

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q5GXR6|TRPA_XANOR

        
1

	
267

	
S=1062 I=81 E=2.91667e-120

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q2P0U3|TRPA_XANOM

        
1

	
267

	
S=1062 I=81 E=2.91667e-120

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

    





    

        
            
                sp_Pdown
            
        
        
sp|B2SVN5|TRPA_XANOP

        
1

	
267

	
S=1056 I=81 E=1.35305e-119

	
Tryptophan synthase alpha chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase

    





    

        Iprscan
        IPR013785
	[G3DSA:3.20.20.70]
	
1

	
267

	
	
Aldolase-type TIM barrel

    





    

        Iprscan
        
	[PTHR10314:SF4]
	
54

	
251

	
	
-

    





    

        Iprscan
        
	[PTHR10314]
	
54

	
251

	
	
-

    





    

        Iprscan
        IPR002028
	[PF00290]
	
8

	
249

	
	
Tryptophan synthase, alpha chain

    





    

        Iprscan
        IPR002028
	[TIGR00262]
	
8

	
262

	
	
Tryptophan synthase, alpha chain

    





    

        Iprscan
        
	[seg]
	
117

	
131

	
	
-

    





    

        Iprscan
        
	[seg]
	
217

	
244

	
	
-

    





    

        
            
                
            
                
        
PD001535

        
2

	
112

	
S=380 I=63 E=1.40348e-38

    	
    





    

        
            
                
            
                
        
PD922511

        
179

	
267

	
S=267 I=66 E=8.43917e-25

    	
    





    

        Iprscan
        IPR011060
	[SSF51366]
	
1

	
266

	
	
Ribulose-phosphate binding barrel

    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
  Validation code (copy this one zTRO3Xxy)  
 
     



Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            106 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            490 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                8 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr27120.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr27120.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr27120.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBwm9_9j/XFF4834R_chr27120.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






trpB XFF4834R_chr27140




    

         
             
            XFF4834R_chr27130
            
XFF4834R_chr27130
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr27150
            
XFF4834R_chr27150
            
        		

    





    

        ID
        trpB
    

    

        AC
        XFF4834R_chr27140
    

    

        LT
        XFF4834R_chr27140
    

    

        OR
        XFF4834R_chr from 3127708 to 3128925 on strand -
    

   

        DE
        probable tryptophan synthase subunit beta 
  

   

        IP
        Pyridoxal phosphate-dependent enzyme, beta subunit
  
  
  
  

        CL
        1.5.1.15 Tryptophan	GO:0000162 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: tryptophan metabolic process (GO:0006568)
Biological Process: metabolic process (GO:0008152)
Molecular Function: pyridoxal phosphate binding (GO:0030170)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: tryptophan synthase activity (GO:0004834)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [E] Amino acid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by darrasse (20120404)
  

  
  


    

        MW
        43192.3 Da
    


    

        SQ
        405 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MSAQPISDFYAYPDAAGHFGKFGGRFVAETLIGPLQELSAAYDQARQDPS
FIAEYDKDLKHYVGRPSPIYHAERLSREVGGAQILLKREDLNHTGAHKIN
NTIGQALLASRMGKTRIIAETGAGQHGVASATVAARLGLECVVYMGATDI
ERQKINVYRMKLLGATVIPVTSGSATLKDALNEAMRDWVTNVRDTFYIIG
TVAGPDPYPRMVRDFNAIVGREAREQMLQDYGRLPDAISACVGGGSNAIG
LFHAFLNDPGVKIYGAEAAGDGIATGRHAASIAAGRPGVLHGNRTYVICD
DDGQITETHSISAGLDYPGVGPEHSFLSDSGRAVYQGITDDEAMAAFHLL
AHTEGILAALESSHAVAQSIKLARELPRDALVLCNLSGRGDKDVHTIAAR
EGIAL

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr11930 lcl|tdcB-XFF4834R_chr11930

        
59

	
145

	
S=99 I=30 E=2.41826e-05

	
catabolic threonine dehydratase, PLP-dependent

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr11930 lcl|tdcB-XFF4834R_chr11930

        
59

	
145

	
S=99 I=30 E=2.41826e-05

	
catabolic threonine dehydratase, PLP-dependent

     	

   





    

        
                pubmed
        
        

        
9

	
405

	
S=1482 I=69 E=8.72187e-171

	
Tryptophan synthase beta chain ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

	
Pubmed 12754231

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
8

	
405

	
S=1435 I=66 E=3.72514e-165

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

	
Pubmed 2211532,2299982

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
10

	
405

	
S=1434 I=67 E=5.81105e-165

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

	
Pubmed 19077236

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
402

	
S=1430 I=68 E=1.61167e-164

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

	
Pubmed 18700039

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
397

	
S=1382 I=65 E=1.06447e-158

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

	
Pubmed 8423001

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
13

	
397

	
S=1377 I=65 E=3.93649e-158

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

	
Pubmed 3127651

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
397

	
S=1365 I=63 E=1.12957e-156

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

	
Pubmed 2503057

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
405

	
S=1362 I=64 E=2.79711e-156

	
TrpB EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate Tryptophan

	
Pubmed 15547262

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
13

	
405

	
S=1350 I=65 E=7.61721e-155

	
Tryptophan synthase beta subunit ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

	
Pubmed 11092742

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
405

	
S=1348 I=63 E=1.28525e-154

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

	
Pubmed 10517032

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q3BRL3|TRPB_XANC5

        
1

	
405

	
S=2133 I=100 E=0

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PJ28|TRPB_XANAC

        
1

	
405

	
S=2130 I=100 E=0

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

    





    

        
            
                sp_Pdown
            
        
        
sp|B2SVN7|TRPB_XANOP

        
1

	
405

	
S=2112 I=99 E=0

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

    





    

        
            
                sp_Pdown
            
        
        
sp|Q2P0U2|TRPB_XANOM

        
1

	
405

	
S=2109 I=98 E=0

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8P7R8|TRPB_XANCP

        
1

	
405

	
S=2057 I=95 E=0

	
Tryptophan synthase beta chain EC=4.2.1.20 ; Amino-acid biosynthesis Aromatic Lyase Pyridoxal phosphate

    





    

        Iprscan
        
	[G3DSA:3.40.50.1100]
	
184

	
398

	
	
-

    





    

        Iprscan
        
	[PTHR10314:SF3]
	
26

	
400

	
	
-

    





    

        Iprscan
        
	[PTHR10314]
	
26

	
400

	
	
-

    





    

        Iprscan
        IPR001926
	[PF00291]
	
64

	
388

	
	
Pyridoxal phosphate-dependent enzyme, beta subunit

    





    

        Iprscan
        IPR006654
	[TIGR00263]
	
17

	
401

	
	
Tryptophan synthase, beta chain

    





    

        Iprscan
        IPR006653
	[PS00168]
	
91

	
105

	
	
Tryptophan synthase, beta chain, conserved site

    





    

        
            
                
            
                
        
PDA1F6P8

        
315

	
388

	
S=238 I=60 E=2.59691e-21

    	
    





    

        
            
                
            
                
        
PDA1V4U8

        
116

	
173

	
S=161 I=71 E=4.87088e-12

    	
    





    

        
            
                
            
                
        
PD001443

        
272

	
314

	
S=161 I=70 E=5.13247e-12

    	
    





    

        
            
                
            
                
        
PD414066

        
207

	
289

	
S=157 I=46 E=1.47399e-11

    	
    





    

        
            
                
            
                
        
PDA1F6W1

        
77

	
114

	
S=152 I=79 E=6.37715e-11

    	
    





    

        
            
                
            
                
        
PDA39434

        
117

	
205

	
S=149 I=38 E=1.23709e-10

    	
    





    

        
            
                
            
                
        
PDA1F6Y5

        
176

	
205

	
S=135 I=83 E=7.25602e-09

    	
    





    

        
            
                
            
                
        
PD001697

        
18

	
76

	
S=127 I=54 E=5.98457e-08

    	
    





    

        
            
                
            
                
        
PDA85825

        
46

	
80

	
S=102 I=51 E=6.74459e-05