Xanthomonas fuscans subsp. fuscans

3 hits

  1. XFF4834R_chr00340gltDXFF4834R_chr00340probable glutamate synthase subunit beta
  2. XFF4834R_chr00350gltBXFF4834R_chr00350glutamate synthase, large subunit
  3. XFF4834R_chr07360XFF4834R_chr07360putative glutamate-cysteine ligase

gltD XFF4834R_chr00340
XFF4834R_chr00330
XFF4834R_chr00330 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Framed OrthoMCL XFF4834R_chr00350
XFF4834R_chr00350
ID gltD
AC XFF4834R_chr00340
LT XFF4834R_chr00340
OR XFF4834R_chr from 38056 to 39537 on strand -
DE probable glutamate synthase subunit beta
IP Adrenodoxin reductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Alpha-helical ferredoxin
CL 1.5.1.1 Glutamate GO:0006537
EC
GO InterPro
Biological Process: oxidation reduction (GO:0055114)
Biological Process: glutamate biosynthetic process (GO:0006537)
Molecular Function: iron-sulfur cluster binding (GO:0051536)
Molecular Function: FAD binding (GO:0050660)
Molecular Function: oxidoreductase activity (GO:0016491)
NAD or NADP as acceptor (GO:0016639)

Curated
PM
AN
CC COG: [ER] Amino acid transport and metabolism;General function prediction only;
CC MODEL: acur
CC STATUS: curated by darrasse (20110304)
MW 52734.4 Da
SQ 493 aa
  
........10........20........30........40........50
         |         |         |         |         |
MSRKQAFQFLDLPRTMPTRIPVELRTSGDWGELYGRFDKADAQYQAGRCL
DCGNPYCSWKCPVHNAIPQWLQLVQENRIEEAAALCHSTNPLPEVCGRVC
PQDRLCEGSCTLEEFGAVTIGAVEKYIVDTAFKMGWRPDLGNVQPSGHRV
AVIGAGPAGLACADRLARAGIEAVVYDRYEQIGGLLQFGIPSFKLDKSVI
GKRREILEGMGVQFRLGVEIGKDISIEQLLAEYDAVFLGTGAYRYTDGGL
PGQDLKNVLPALPFLVQNSRIVSGNDPHGRPIAGWEDQLALPDLTGKRVV
VLGGGDTGMDCVRSAIRLGAAKVTCAYRRDEASMPGSAREVANAREEGVR
FLFNRQPLSIESGADDEAIGVTVVETKLGEPDASGRRNAVPVEGSESLLE
ADVVIIAFGFSPTLPDWLASQGVEAGSNGRIVAPADGNGRLPYQTTNPRL
FAGGDCVRGADLVVTAVAEGRDAAGSIVQLLGVKAQVKEPAAA

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr10160 lcl|fadH-XFF4834R_chr10160

        
142

	
262

	
S=111 I=33 E=8.82709e-07

	
2,4-dienoyl-CoA reductase, NADH and FMN-linked

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr10160 lcl|fadH-XFF4834R_chr10160

        
142

	
262

	
S=111 I=33 E=8.82709e-07

	
2,4-dienoyl-CoA reductase, NADH and FMN-linked

     	

   





    

        
                pubmed
        
        

        
4

	
483

	
S=1441 I=57 E=1.1486e-165

	
Glutamate synthase [NADPH] small chain EC=1.4.1.13 ; 4Fe-4S Amino-acid biosynthesis Iron Iron-sulfur Metal-binding Oxidoreductase

	
Pubmed 3326786

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
483

	
S=1436 I=57 E=3.92703e-165

	
Glutamate synthase small subunit

	
Pubmed 11673431

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
483

	
S=1423 I=58 E=1.6976e-163

	
GltD

	
Pubmed 15601726

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
483

	
S=1418 I=58 E=7.09286e-163

	
Glutamate synthase small chain Glutamate synthase small subunit

	
Pubmed 15175298

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
483

	
S=1389 I=57 E=2.23641e-159

	
Putative glutamate synthase [NADPH] small chain

	
Pubmed 18328084

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
13

	
483

	
S=1365 I=56 E=1.77834e-156

	
Putative oxidoreductase ; 4Fe-4S Iron Iron-sulfur Metal-binding

	
Pubmed 12379698,15271940

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
485

	
S=1332 I=54 E=1.51498e-152

	
Protein aegA ; 4Fe-4S Iron Iron-sulfur Metal-binding Oxidoreductase Repeat

	
Pubmed 8955321

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
483

	
S=1319 I=55 E=6.49218e-151

	
Glutamate synthase small subunit gltD

	
Pubmed 8921877

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
487

	
S=952 I=43 E=1.69081e-106

	
NADPH-dependent glutamate synthase beta chain-related oxidase

	
Pubmed 18028413

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
477

	
S=921 I=44 E=1.01631e-102

	
Glutamate synthase [NADPH] small chain EC=1.4.1.13 ; 4Fe-4S Amino-acid biosynthesis Iron Iron-sulfur Metal-binding Oxidoreductase

	
Pubmed 8428988,2198943

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|P09832|GLTD_ECOLI

        
4

	
483

	
S=1441 I=57 E=7.90112e-166

	
Glutamate synthase [NADPH] small chain EC=1.4.1.13 ; 4Fe-4S Amino-acid biosynthesis Iron Iron-sulfur Metal-binding Oxidoreductase

    





    

        
            
                sp_Pdown
            
        
        
sp|P37127|AEGA_ECOLI

        
1

	
485

	
S=1332 I=54 E=1.04215e-152

	
Protein aegA ; 4Fe-4S Iron Iron-sulfur Metal-binding Oxidoreductase Repeat

    





    

        
            
                sp_Pdown
            
        
        
sp|Q46820|YGFT_ECOLI

        
30

	
485

	
S=1226 I=54 E=8.00581e-140

	
Uncharacterized protein ygfT ; 4Fe-4S Iron Iron-sulfur Metal-binding Oxidoreductase Repeat

    





    

        
            
                sp_Pdown
            
        
        
sp|Q05756|GLTD_AZOBR

        
1

	
477

	
S=921 I=44 E=6.99114e-103

	
Glutamate synthase [NADPH] small chain EC=1.4.1.13 ; 4Fe-4S Amino-acid biosynthesis Iron Iron-sulfur Metal-binding Oxidoreductase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q12680|GLT1_YEAST

        
28

	
481

	
S=633 I=35 E=5.70327e-68

	
Glutamate synthase [NADH] EC=1.4.1.14 ; 3Fe-4S Amino-acid biosynthesis Coiled FAD Flavoprotein FMN Glutamine amidotransferase Iron Iron-sulfur

    





    

        Iprscan
        IPR000759
	[PR00419]
	
149

	
171

	
	
Adrenodoxin reductase

    





    

        Iprscan
        IPR000759
	[PR00419]
	
172

	
185

	
	
Adrenodoxin reductase

    





    

        Iprscan
        IPR000759
	[PR00419]
	
299

	
313

	
	
Adrenodoxin reductase

    





    

        Iprscan
        IPR000759
	[PR00419]
	
333

	
346

	
	
Adrenodoxin reductase

    





    

        Iprscan
        IPR012285
	[G3DSA:1.10.1060.10]
	
29

	
151

	
	
Fumarate reductase, C-terminal

    





    

        Iprscan
        
	[G3DSA:3.50.50.60]
	
243

	
409

	
	
-

    





    

        Iprscan
        
	[PTHR11938:SF9]
	
9

	
481

	
	
-

    





    

        Iprscan
        
	[PTHR11938]
	
9

	
481

	
	
-

    





    

        Iprscan
        IPR013027
	[PF07992]
	
149

	
459

	
	
FAD-dependent pyridine nucleotide-disulphide oxidoreductase

    





    

        Iprscan
        IPR001327
	[PF00070]
	
298

	
368

	
	
Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region

    





    

        Iprscan
        IPR006006
	[TIGR01318]
	
7

	
483

	
	
Glutamate synthase, NADH/NADPH, small subunit 2

    





    

        
            
                
            
                
        
PD149671

        
14

	
150

	
S=377 I=51 E=4.35368e-38

    	
    





    

        
            
                
            
                
        
PD453601

        
236

	
382

	
S=222 I=43 E=2.24783e-19

    	
    





    

        
            
                
            
                
        
PDA1F5C2

        
1

	
40

	
S=212 I=93 E=3.69175e-18

    	
    





    

        
            
                
            
                
        
PDA696N2

        
96

	
136

	
S=164 I=70 E=2.54697e-12

    	
    





    

        
            
                
            
                
        
PD070301

        
185

	
236

	
S=156 I=58 E=2.19427e-11

    	
    





    

        
            
                
            
                
        
PD857031

        
46

	
110

	
S=154 I=51 E=4.85134e-11

    	
    





    

        
            
                
            
                
        
PDA1Q9B9

        
115

	
146

	
S=149 I=81 E=1.99194e-10

    	
    





    

        
            
                
            
                
        
PD696384

        
237

	
276

	
S=131 I=63 E=2.53847e-08

    	
    





    

        
            
                
            
                
        
PDA2W5Q7

        
126

	
148

	
S=129 I=96 E=4.79719e-08

    	
    





    

        
            
                
            
                
        
PDA1T0Y5

        
352

	
376

	
S=124 I=100 E=2.00435e-07

    	
    





    

        Iprscan
        
	[SSF51971]
	
146

	
409

	
	
-

    





    

        Iprscan
        IPR009051
	[SSF46548]
	
7

	
158

	
	
Alpha-helical ferredoxin

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            79 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            35 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            1 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                13 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr00340.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr00340.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr00340.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr00340.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






gltB XFF4834R_chr00350




    

         
             
            XFF4834R_chr00340
            
XFF4834R_chr00340
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr00360
            
XFF4834R_chr00360
            
        		

    





    

        ID
        gltB
    

    

        AC
        XFF4834R_chr00350
    

    

        LT
        XFF4834R_chr00350
    

    

        OR
        XFF4834R_chr from 39659 to 44131 on strand -
    

   

        DE
        glutamate synthase, large subunit
  

   

        IP
        Glutamine amidotransferase, class-II; Glutamate synthase, central-N
  
  
  
  

        CL
        1.5.1.1 Glutamate	GO:0006537 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: oxidation reduction (GO:0055114)
Biological Process: nitrogen compound metabolic process (GO:0006807)
Biological Process: metabolic process (GO:0008152)
Biological Process: glutamate biosynthetic process (GO:0006537)
Molecular Function: glutamate synthase activity (GO:0015930)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: catalytic activity (GO:0003824)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [E] Amino acid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by jacques (20101013)
  

  
  


    

        MW
        162763.4 Da
    


    

        SQ
        1490 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MAPRTRQGLNDDGLYNSVRDERDACGFGMVAQLDDQPSRALVDTAIAALS
RMTHRGGVAADGLTGDGCGLLIRKPDAFLRGLARDAGITLGTRYAAGVVF
LPLDEADAARCRAELEAQLHSAGVHLRGWRVVPTDDSVCGQLARDTLPRI
EQVFVDAGAEQTEDGFTLALFLARRRAEQALHAVENFYVTTLSPNGISYK
GMVLPDKLSTFYPDLQRSDLSSSAIVFHQRFSTNTLPRWPLAHPFRLLAH
NGEINTIEGNRRWAQARSKVWQTPRFDIAQFDPVISMHGSDSQSLDNMLE
LLIAGGMDLLQALRILVPPATQSLEFKDADLAAFYEFYGLNTEPWDGPAG
IVACDSRYAACMLDRNGLRPARWMLTSDRHFLVASEAGVWELPAERITRK
GKLGPGEMMAIDLKRGDLLDSDAIDRINRARAPYKQWLQQGVTYLQTELI
DPSLVEEPFSEQTLRSYHKLFQLSTEEVEQVLRPLAETEQEATGSMGDDT
PMAVLSRQTRPLYDYFRQAFAQVTNPPIDPLREGIAMSLTTQLGKETNIF
HAGAETVNHVILNSPVLSQRKLRQLLKMEQYVERNRLIDLSYSLEEGLKA
GLERICQEVEAAARAGAVMLLLSDRYPVPDRPMAHALLATGAVHHHLCKV
GLRCDVNLIIETGTARDPHHMACLLGVGATAVYPYLAYQTLFDLGRRGIL
QLSKGGEQSQIGRRYRKGIYKGLSKIISKMGICTIASYRGAQLFEIVGLD
PDVVDLCFADTPARIGGVDLARLDTEARELTVRAWNDQLKPEVGGLLKYV
HGGEYHMYNPDVVMTLQRATRTGDAGDWQKYVDAVHARPASTLRDLVQLK
RADTPTPLDDVAPAEDVLRRFDSAAISLGALSPEAHEALAIAMNRLGGRS
NSGEGGEDPARYGTEKRSKIKQVASGRFGVTPEYLVNAEVLQIKVAQGAK
PGEGGQLPGHKVNELIARLRYAKPGIGLISPPPHHDIYSIEDLAQLIYDL
KQVNPTALVSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSS
IRYAGVPWELGVAESHQALVANDLRERTILQTDGGLKTGLDVVKAALLGA
DSFGFGTAPMIVLGCKYLRICHLNNCATGVATQDERLRAGYFTGLPERVE
HFFRLLAEEVRQWLSYLGVRSLDEIVGRTDLLEQLDVSPRPGVKVDLSRL
LTHAQYDGSHCAAQRLYESPDSLATQMDGLLADAIANKRGGDHRFLIHNT
DRSIGARLSGAIARAHGNHGMSDAPLNLRFRGTAGQSFGAFNAGGLQLEL
EGEANDYVGKGMAGGRLVVRPPRGARFEARNTPIVGNTCLYGATGGELFA
AGRAGERFAVRNSGALAVLEGAGDHCCEYMTDGVVLVLGKVGLNFGAGFT
GGLAYVLDIERDFVDRYNHELIDIHRVSAEGFENHRQHLHTLISRHRELT
GSIWAQQILDEFRDYIGKFWLVKPKAASIESLTESLRRAA

    






    

        
            
                XFF4834R
            
                
        
NP_640389.1 lcl|gltB-XAC0033

        
1

	
1490

	
S=7798 I=99 E=0

	
glutamate synthase subunit alpha

     	

   





    

        
            
                XFF4834R
            
                
        
YP_361768.1 lcl|gltB-XCV0037

        
1

	
1490

	
S=7722 I=98 E=0

	
glutamate synthase subunit alpha

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635427.1 lcl|gltB-XCC0032

        
1

	
1490

	
S=7664 I=97 E=0

	
glutamate synthase subunit alpha

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|gltB-XALc_3110

        
9

	
1490

	
S=6937 I=88 E=0

	
probable glutamate synthase, alpha subunit protein

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|gltB-XALc_1694

        
871

	
1136

	
S=315 I=34 E=2.04413e-30

	
putative ferredoxin-dependent_glutamate_synthase protein

     	

   





    

        
                pubmed
        
        

        
13

	
1487

	
S=4391 I=57 E=0

	
GltB

	
Pubmed 15601726

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
13

	
1487

	
S=4380 I=58 E=0

	
Glutamate synthase large subunit

	
Pubmed 15175298

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
4

	
1482

	
S=4072 I=54 E=0

	
Putative glutamate synthase [NADPH] large chain

	
Pubmed 18328084

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
21

	
1490

	
S=4012 I=53 E=0

	
Glutamate synthase large subunit

	
Pubmed 11673431

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
12

	
1490

	
S=3943 I=53 E=0

	
Glutamate synthase [NADPH] large chain EC=1.4.1.13 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotransferase Iron Iron

	
Pubmed 3326786

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
16

	
1476

	
S=3149 I=45 E=0

	
Ferredoxin-dependent glutamate synthase, chloroplastic EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotransferase Iron

	
Pubmed 1989968

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
18

	
1476

	
S=3141 I=45 E=0

	
Ferredoxin-dependent glutamate synthase 1, chloroplastic EC=1.4.7.1 ; 3Fe-4S Alternative splicing Amino-acid biosynthesis FAD Flavoprotein FMN

	
Pubmed 9057836,9596633

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
18

	
1476

	
S=3117 I=44 E=0

	
Ferredoxin-dependent glutamate synthase 2, chloroplastic EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotran

	
Pubmed 9596633

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
18

	
1476

	
S=3103 I=45 E=0

	
Ferredoxin-dependent glutamate synthase EC=1.4.7.1 ; Oxidoreductase

	
Pubmed 16034598

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
25

	
1476

	
S=3086 I=44 E=0

	
Ferredoxin-dependent glutamate synthase, chloroplastic EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotransferase Iron Iron-

	
Pubmed 8286406

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|P09831|GLTB_ECOLI

        
12

	
1490

	
S=3943 I=53 E=0

	
Glutamate synthase [NADPH] large chain EC=1.4.1.13 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotransferase Iron Iron

    





    

        
            
                sp_Pdown
            
        
        
sp|P23225|GLTB_MAIZE

        
16

	
1476

	
S=3149 I=45 E=0

	
Ferredoxin-dependent glutamate synthase, chloroplastic EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotransferase Iron

    





    

        
            
                sp_Pdown
            
        
        
sp|Q9ZNZ7|GLTB1_ARATH

        
18

	
1476

	
S=3141 I=45 E=0

	
Ferredoxin-dependent glutamate synthase 1, chloroplastic EC=1.4.7.1 ; 3Fe-4S Alternative splicing Amino-acid biosynthesis FAD Flavoprotein FMN

    





    

        
            
                sp_Pdown
            
        
        
sp|P51375|GLTB_PORPU

        
17

	
1480

	
S=3133 I=44 E=0

	
Ferredoxin-dependent glutamate synthase EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis Chloroplast FAD Flavoprotein FMN Glutamine amidotransferase Iron Iron-sulfur

    





    

        
            
                sp_Pdown
            
        
        
sp|Q9T0P4|GLTB2_ARATH

        
18

	
1476

	
S=3117 I=44 E=0

	
Ferredoxin-dependent glutamate synthase 2, chloroplastic EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotran

    





    

        Iprscan
        
	[G3DSA:3.60.20.10]
	
25

	
441

	
	
-

    





    

        Iprscan
        IPR013785
	[G3DSA:3.20.20.70]
	
444

	
798

	
	
Aldolase-type TIM barrel

    





    

        Iprscan
        IPR013785
	[G3DSA:3.20.20.70]
	
798

	
1201

	
	
Aldolase-type TIM barrel

    





    

        Iprscan
        IPR002489
	[G3DSA:2.160.20.60]
	
1223

	
1481

	
	
Glutamate synthase, alpha subunit, C-terminal

    





    

        Iprscan
        IPR000583
	[PF00310]
	
25

	
387

	
	
Glutamine amidotransferase, class-II

    





    

        Iprscan
        IPR006982
	[PF04898]
	
464

	
751

	
	
Glutamate synthase, central-N

    





    

        Iprscan
        IPR002932
	[PF01645]
	
806

	
1170

	
	
Glutamate synthase, central-C

    





    

        Iprscan
        IPR002489
	[PF01493]
	
1243

	
1442

	
	
Glutamate synthase, alpha subunit, C-terminal

    





    

        Iprscan
        IPR017932
	[PS51278]
	
25

	
414

	
	
Glutamine amidotransferase, type II

    





    

        Iprscan
        
	[seg]
	
1383

	
1393

	
	
-

    





    

        
            
                
            
                
        
PD188236

        
1234

	
1474

	
S=644 I=56 E=2.78311e-70

    	
    





    

        
            
                
            
                
        
PD002671

        
940

	
1065

	
S=490 I=72 E=1.15551e-51

    	
    





    

        
            
                
            
                
        
PD581617

        
566

	
770

	
S=476 I=51 E=6.32094e-50

    	
    





    

        
            
                
            
                
        
PD003387

        
197

	
312

	
S=372 I=58 E=2.33449e-37

    	
    





    

        
            
                
            
                
        
PD282830

        
312

	
445

	
S=330 I=46 E=2.86586e-32

    	
    





    

        
            
                
            
                
        
PD869886

        
1162

	
1227

	
S=305 I=85 E=2.68943e-29

    	
    





    

        
            
                
            
                
        
PD002943

        
466

	
567

	
S=290 I=55 E=1.76678e-27

    	
    





    

        
            
                
            
                
        
PD882649

        
768

	
873

	
S=234 I=42 E=1.19685e-20

    	
    





    

        
            
                
            
                
        
PD572830

        
874

	
935

	
S=227 I=73 E=8.58595e-20

    	
    





    

        
            
                
            
                
        
PD682097

        
94

	
203

	
S=188 I=39 E=4.07495e-15

    	
    




Show or not Suggestions
Suggest an annotation


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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            84 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            19 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                10 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr00350.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr00350.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr00350.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr00350.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






 XFF4834R_chr07360




    

         
             
            XFF4834R_chr_0806
            
XFF4834R_chr_0806
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr07370
            
XFF4834R_chr07370
            
        		

    





    

        ID
        
    

    

        AC
        XFF4834R_chr07360
    

    

        LT
        XFF4834R_chr07360
    

    

        OR
        XFF4834R_chr from 851217 to 852635 on strand +
    

   

        DE
        putative glutamate-cysteine ligase
  

   

        IP
        Glutamate--cysteine ligase, GCS2; Glutamate--cysteine ligase, plant
  
  
  
  

        CL
        1.5.1.1 Glutamate	GO:0006537 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: glutathione biosynthetic process (GO:0006750)
Molecular Function: glutamate-cysteine ligase activity (GO:0004357)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [H] Coenzyme transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by pieretti (20100330)
  

  
  


    

        MW
        52687.1 Da
    


    

        SQ
        472 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MAGEYPHIVRPLSFASLPLSSPSHVAETPITERAELAQVLASGEKPSADW
RIGTEHEKFGFQLDDLRAPTFGGARGIEALLTGLTRFGWEPVQENGRTIA
LLRDGASVTLEPAGQLELSGAAVETLHHTCVETGTHLDEVAQVAGELQLG
FLGMGFQPKWRRDQMPWMPKGRYQIMKNYMPKVGSLGLDMMTRTCTVQVN
LDYATEADMVKKFRVSLALQPIATALFADSPFTDGKPNGYLSYRSHIWTD
TDADRTGMLDFVFEDGFGYDRYVDYLLDVPMYFSYRDGVYHDASGQSFRD
FMQGKLPALPGALPTFRDWSDHMTTAFPEVRLKKYLEMRGADAGPWDRLC
ALSAFWVGLLYDQTALDAAWDLVRDFSPTERHALRDGVPKHALGLPFRTG
TARDLAVEAVNIAREGLRRRARLNRDGQDETGFLDVIAEIAESGVTAAER
KLALYHGAWNGDIDRVFREFAY

    






    

        
            
                XFF4834R
            
                
        
YP_362513.1 lcl|gsh1-XCV0782

        
1

	
472

	
S=2282 I=92 E=0

	
glutamate-cysteine ligase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_641081.1 lcl|gsh1-XAC0728

        
24

	
472

	
S=2279 I=96 E=0

	
glutamate-cysteine ligase precursor

     	

   





    

        
            
                XFF4834R
            
                
        
NP_638742.1 lcl|gsh1-XCC3396

        
24

	
472

	
S=2144 I=90 E=0

	
glutamate-cysteine ligase precursor

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_0856

        
1

	
472

	
S=1914 I=80 E=0

	
putative glutamate cystein ligase protein

     	

   





    

        
                pubmed
        
        

        
25

	
472

	
S=1392 I=58 E=9.08811e-160

	
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit pep

	
Pubmed 9620267,9119067

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
25

	
472

	
S=1369 I=57 E=4.513e-157

	
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; Alternative splicing ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding

	
Pubmed 7937837,9807829

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
25

	
472

	
S=1369 I=57 E=5.56341e-157

	
Gamma-glutamylcysteine synthetase ; Transit peptide

	
Pubmed 10557236

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
25

	
472

	
S=1363 I=57 E=2.44933e-156

	
Gamma-glutamylcysteine synthetase EC=6.3.2.2 ; Ligase

	
Pubmed 16301210

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
25

	
472

	
S=1362 I=57 E=3.23754e-156

	
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit peptide

	
Pubmed 10694062

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
25

	
472

	
S=1361 I=57 E=4.66927e-156

	
Gamma-glutamylcysteine synthetase

	
Pubmed 14601672

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
25

	
472

	
S=1360 I=57 E=6.22592e-156

	
Gamma-glutamylcysteine synthetase ; Transit peptide

	
Pubmed 10557236

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
29

	
472

	
S=1340 I=57 E=1.75417e-153

	
Glutamate--cysteine ligase A, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Tran

	
Pubmed 16261349

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
29

	
472

	
S=1333 I=56 E=1.15334e-152

	
Putative gamma-glutamylcysteine synthetase EC=6.3.2.2 ; Ligase

	
Pubmed 15047902

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
48

	
390

	
S=1112 I=60 E=7.75077e-126

	
Putative glutathione synthetase GshA

	
Pubmed 8825087

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|O23736|GSH1_BRAJU

        
25

	
472

	
S=1392 I=58 E=6.25343e-160

	
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit pep

    





    

        
            
                sp_Pdown
            
        
        
sp|P46309|GSH1_ARATH

        
25

	
472

	
S=1369 I=57 E=3.10535e-157

	
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; Alternative splicing ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding

    





    

        
            
                sp_Pdown
            
        
        
sp|Q9ZNX6|GSH1_MEDTR

        
25

	
472

	
S=1362 I=57 E=2.22772e-156

	
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit peptide

    





    

        
            
                sp_Pdown
            
        
        
sp|Q1W2L8|GSH1_TOBAC

        
25

	
472

	
S=1353 I=57 E=2.84132e-155

	
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit peptide

    





    

        
            
                sp_Pdown
            
        
        
sp|O22493|GSH1_SOLLC

        
25

	
472

	
S=1351 I=57 E=4.79413e-155

	
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit peptide

    





    

        Iprscan
        IPR006336
	[PF04107]
	
77

	
375

	
	
Glutamate--cysteine ligase, GCS2

    





    

        Iprscan
        IPR011556
	[TIGR01436]
	
29

	
472

	
	
Glutamate--cysteine ligase, plant

    





    

        Iprscan
        
	[seg]
	
11

	
23

	
	
-

    





    

        Iprscan
        
	[seg]
	
413

	
425

	
	
-

    





    

        
            
                
            
                
        
PD526943

        
314

	
472

	
S=434 I=55 E=4.81935e-45

    	
    





    

        
            
                
            
                
        
PD284755

        
29

	
121

	
S=296 I=63 E=2.86554e-28

    	
    





    

        
            
                
            
                
        
PD014390

        
182

	
242

	
S=294 I=87 E=4.13275e-28

    	
    





    

        
            
                
            
                
        
PDA1G240

        
123

	
181

	
S=246 I=64 E=2.7776e-22

    	
    





    

        
            
                
            
                
        
PDA1G292

        
243

	
279

	
S=159 I=81 E=1.04563e-11

    	
    





    

        
            
                
            
                
        
PDA1G2G2

        
280

	
311

	
S=146 I=81 E=3.8636e-10

    	
    





    

        
            
                
            
                
        
PDA1Y481

        
426

	
472

	
S=137 I=55 E=5.19243e-09

    	
    





    

        
            
                
            
                
        
PD885126

        
426

	
472

	
S=127 I=51 E=8.09318e-08

    	
    





    

        
            
                
            
                
        
PDA5L7C3

        
243

	
306

	
S=114 I=36 E=2.62383e-06

    	
    





    

        
            
                
            
                
        
PDA1T6B4

        
450

	
472

	
S=110 I=91 E=8.5136e-06

    	
    





    

        Iprscan
        
	[SSF55931]
	
41

	
471

	
	
-

    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
  Validation code (copy this one 87qCjpt2)  
 
     



Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            13 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            9 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            1 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                5 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr07360.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr07360.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr07360.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBqmZjzc/XFF4834R_chr07360.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    •