3 hits
XFF4834R_chr00340 | gltD | XFF4834R_chr00340 | probable glutamate synthase subunit beta |
XFF4834R_chr00350 | gltB | XFF4834R_chr00350 | glutamate synthase, large subunit |
XFF4834R_chr07360 | XFF4834R_chr07360 | putative glutamate-cysteine ligase |
![]() XFF4834R_chr00330 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr00350 |
ID | gltD |
AC | XFF4834R_chr00340 |
LT | XFF4834R_chr00340 |
OR | XFF4834R_chr from 38056 to 39537 on strand - |
DE | probable glutamate synthase subunit beta |
IP | Adrenodoxin reductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Alpha-helical ferredoxin |
CL | 1.5.1.1 Glutamate GO:0006537 |
EC | |
GO |
InterPro Biological Process: glutamate biosynthetic process (GO:0006537) Biological Process: oxidation reduction (GO:0055114) Molecular Function: oxidoreductase activity (GO:0016491) Molecular Function: iron-sulfur cluster binding (GO:0051536) Molecular Function: FAD binding (GO:0050660) NAD or NADP as acceptor (GO:0016639) Curated |
PM | |
AN | |
CC | COG: [ER] Amino acid transport and metabolism;General function prediction only; |
CC | MODEL: acur |
CC | STATUS: curated by darrasse (20110304) |
MW | 52734.4 Da |
SQ | 493 aa |
........10........20........30........40........50 |
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XFF4834R_chr10160 lcl|fadH-XFF4834R_chr10160 |
142 |
262 |
S=111 I=33 E=8.82709e-07 |
2,4-dienoyl-CoA reductase, NADH and FMN-linked |
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XFF4834R_chr10160 lcl|fadH-XFF4834R_chr10160 |
142 |
262 |
S=111 I=33 E=8.82709e-07 |
2,4-dienoyl-CoA reductase, NADH and FMN-linked |
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4 |
483 |
S=1441 I=57 E=1.1486e-165 |
Glutamate synthase [NADPH] small chain EC=1.4.1.13 ; 4Fe-4S Amino-acid biosynthesis Iron Iron-sulfur Metal-binding Oxidoreductase |
Pubmed 3326786 |
|
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4 |
483 |
S=1436 I=57 E=3.92703e-165 |
Glutamate synthase small subunit |
Pubmed 11673431 |
|
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7 |
483 |
S=1423 I=58 E=1.6976e-163 |
GltD |
Pubmed 15601726 |
|
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7 |
483 |
S=1418 I=58 E=7.09286e-163 |
Glutamate synthase small chain Glutamate synthase small subunit |
Pubmed 15175298 |
|
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4 |
483 |
S=1389 I=57 E=2.23641e-159 |
Putative glutamate synthase [NADPH] small chain |
Pubmed 18328084 |
|
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13 |
483 |
S=1365 I=56 E=1.77834e-156 |
Putative oxidoreductase ; 4Fe-4S Iron Iron-sulfur Metal-binding |
||
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1 |
485 |
S=1332 I=54 E=1.51498e-152 |
Protein aegA ; 4Fe-4S Iron Iron-sulfur Metal-binding Oxidoreductase Repeat |
Pubmed 8955321 |
|
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7 |
483 |
S=1319 I=55 E=6.49218e-151 |
Glutamate synthase small subunit gltD |
Pubmed 8921877 |
|
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1 |
487 |
S=952 I=43 E=1.69081e-106 |
NADPH-dependent glutamate synthase beta chain-related oxidase |
Pubmed 18028413 |
|
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1 |
477 |
S=921 I=44 E=1.01631e-102 |
Glutamate synthase [NADPH] small chain EC=1.4.1.13 ; 4Fe-4S Amino-acid biosynthesis Iron Iron-sulfur Metal-binding Oxidoreductase |
||
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4 |
483 |
S=1441 I=57 E=7.90112e-166 |
Glutamate synthase [NADPH] small chain EC=1.4.1.13 ; 4Fe-4S Amino-acid biosynthesis Iron Iron-sulfur Metal-binding Oxidoreductase |
||
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1 |
485 |
S=1332 I=54 E=1.04215e-152 |
Protein aegA ; 4Fe-4S Iron Iron-sulfur Metal-binding Oxidoreductase Repeat |
||
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30 |
485 |
S=1226 I=54 E=8.00581e-140 |
Uncharacterized protein ygfT ; 4Fe-4S Iron Iron-sulfur Metal-binding Oxidoreductase Repeat |
||
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1 |
477 |
S=921 I=44 E=6.99114e-103 |
Glutamate synthase [NADPH] small chain EC=1.4.1.13 ; 4Fe-4S Amino-acid biosynthesis Iron Iron-sulfur Metal-binding Oxidoreductase |
||
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28 |
481 |
S=633 I=35 E=5.70327e-68 |
Glutamate synthase [NADH] EC=1.4.1.14 ; 3Fe-4S Amino-acid biosynthesis Coiled FAD Flavoprotein FMN Glutamine amidotransferase Iron Iron-sulfur |
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IPR000759 [PR00419] | 149 |
171 |
Adrenodoxin reductase |
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IPR000759 [PR00419] | 172 |
185 |
Adrenodoxin reductase |
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IPR000759 [PR00419] | 299 |
313 |
Adrenodoxin reductase |
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IPR000759 [PR00419] | 333 |
346 |
Adrenodoxin reductase |
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IPR012285 [G3DSA:1.10.1060.10] | 29 |
151 |
Fumarate reductase, C-terminal |
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[G3DSA:3.50.50.60] | 243 |
409 |
- |
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[PTHR11938:SF9] | 9 |
481 |
- |
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[PTHR11938] | 9 |
481 |
- |
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IPR013027 [PF07992] | 149 |
459 |
FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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IPR001327 [PF00070] | 298 |
368 |
Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region |
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IPR006006 [TIGR01318] | 7 |
483 |
Glutamate synthase, NADH/NADPH, small subunit 2 |
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14 |
150 |
S=377 I=51 E=4.35368e-38 |
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236 |
382 |
S=222 I=43 E=2.24783e-19 |
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1 |
40 |
S=212 I=93 E=3.69175e-18 |
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96 |
136 |
S=164 I=70 E=2.54697e-12 |
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185 |
236 |
S=156 I=58 E=2.19427e-11 |
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46 |
110 |
S=154 I=51 E=4.85134e-11 |
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115 |
146 |
S=149 I=81 E=1.99194e-10 |
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237 |
276 |
S=131 I=63 E=2.53847e-08 |
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126 |
148 |
S=129 I=96 E=4.79719e-08 |
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352 |
376 |
S=124 I=100 E=2.00435e-07 |
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[SSF51971] | 146 |
409 |
- |
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IPR009051 [SSF46548] | 7 |
158 |
Alpha-helical ferredoxin |
Access unfiltered results
Miscellaneous analyses
![]() XFF4834R_chr00340 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr00360 |
ID | gltB |
AC | XFF4834R_chr00350 |
LT | XFF4834R_chr00350 |
OR | XFF4834R_chr from 39659 to 44131 on strand - |
DE | glutamate synthase, large subunit |
IP | Glutamine amidotransferase, class-II; Glutamate synthase, central-N |
CL | 1.5.1.1 Glutamate GO:0006537 |
EC | |
GO |
InterPro Biological Process: oxidation reduction (GO:0055114) Biological Process: metabolic process (GO:0008152) Biological Process: nitrogen compound metabolic process (GO:0006807) Biological Process: glutamate biosynthetic process (GO:0006537) Molecular Function: glutamate synthase activity (GO:0015930) Molecular Function: oxidoreductase activity (GO:0016491) Molecular Function: catalytic activity (GO:0003824) Curated |
PM | |
AN | |
CC | COG: [E] Amino acid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by jacques (20101013) |
MW | 162763.4 Da |
SQ | 1490 aa |
........10........20........30........40........50 |
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NP_640389.1 lcl|gltB-XAC0033 |
1 |
1490 |
S=7798 I=99 E=0 |
glutamate synthase subunit alpha |
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YP_361768.1 lcl|gltB-XCV0037 |
1 |
1490 |
S=7722 I=98 E=0 |
glutamate synthase subunit alpha |
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NP_635427.1 lcl|gltB-XCC0032 |
1 |
1490 |
S=7664 I=97 E=0 |
glutamate synthase subunit alpha |
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9 |
1490 |
S=6937 I=88 E=0 |
probable glutamate synthase, alpha subunit protein |
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871 |
1136 |
S=315 I=34 E=2.04413e-30 |
putative ferredoxin-dependent_glutamate_synthase protein |
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13 |
1487 |
S=4391 I=57 E=0 |
GltB |
Pubmed 15601726 |
|
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13 |
1487 |
S=4380 I=58 E=0 |
Glutamate synthase large subunit |
Pubmed 15175298 |
|
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4 |
1482 |
S=4072 I=54 E=0 |
Putative glutamate synthase [NADPH] large chain |
Pubmed 18328084 |
|
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21 |
1490 |
S=4012 I=53 E=0 |
Glutamate synthase large subunit |
Pubmed 11673431 |
|
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12 |
1490 |
S=3943 I=53 E=0 |
Glutamate synthase [NADPH] large chain EC=1.4.1.13 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotransferase Iron Iron |
Pubmed 3326786 |
|
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16 |
1476 |
S=3149 I=45 E=0 |
Ferredoxin-dependent glutamate synthase, chloroplastic EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotransferase Iron |
Pubmed 1989968 |
|
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18 |
1476 |
S=3141 I=45 E=0 |
Ferredoxin-dependent glutamate synthase 1, chloroplastic EC=1.4.7.1 ; 3Fe-4S Alternative splicing Amino-acid biosynthesis FAD Flavoprotein FMN |
||
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18 |
1476 |
S=3117 I=44 E=0 |
Ferredoxin-dependent glutamate synthase 2, chloroplastic EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotran |
Pubmed 9596633 |
|
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18 |
1476 |
S=3103 I=45 E=0 |
Ferredoxin-dependent glutamate synthase EC=1.4.7.1 ; Oxidoreductase |
Pubmed 16034598 |
|
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25 |
1476 |
S=3086 I=44 E=0 |
Ferredoxin-dependent glutamate synthase, chloroplastic EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotransferase Iron Iron- |
Pubmed 8286406 |
|
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12 |
1490 |
S=3943 I=53 E=0 |
Glutamate synthase [NADPH] large chain EC=1.4.1.13 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotransferase Iron Iron |
||
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16 |
1476 |
S=3149 I=45 E=0 |
Ferredoxin-dependent glutamate synthase, chloroplastic EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotransferase Iron |
||
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18 |
1476 |
S=3141 I=45 E=0 |
Ferredoxin-dependent glutamate synthase 1, chloroplastic EC=1.4.7.1 ; 3Fe-4S Alternative splicing Amino-acid biosynthesis FAD Flavoprotein FMN |
||
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17 |
1480 |
S=3133 I=44 E=0 |
Ferredoxin-dependent glutamate synthase EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis Chloroplast FAD Flavoprotein FMN Glutamine amidotransferase Iron Iron-sulfur |
||
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18 |
1476 |
S=3117 I=44 E=0 |
Ferredoxin-dependent glutamate synthase 2, chloroplastic EC=1.4.7.1 ; 3Fe-4S Amino-acid biosynthesis FAD Flavoprotein FMN Glutamine amidotran |
||
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[G3DSA:3.60.20.10] | 25 |
441 |
- |
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IPR013785 [G3DSA:3.20.20.70] | 444 |
798 |
Aldolase-type TIM barrel |
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IPR013785 [G3DSA:3.20.20.70] | 798 |
1201 |
Aldolase-type TIM barrel |
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IPR002489 [G3DSA:2.160.20.60] | 1223 |
1481 |
Glutamate synthase, alpha subunit, C-terminal |
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IPR000583 [PF00310] | 25 |
387 |
Glutamine amidotransferase, class-II |
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IPR006982 [PF04898] | 464 |
751 |
Glutamate synthase, central-N |
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IPR002932 [PF01645] | 806 |
1170 |
Glutamate synthase, central-C |
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IPR002489 [PF01493] | 1243 |
1442 |
Glutamate synthase, alpha subunit, C-terminal |
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IPR017932 [PS51278] | 25 |
414 |
Glutamine amidotransferase, type II |
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[seg] | 1383 |
1393 |
- |
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1234 |
1474 |
S=644 I=56 E=2.78311e-70 |
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940 |
1065 |
S=490 I=72 E=1.15551e-51 |
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566 |
770 |
S=476 I=51 E=6.32094e-50 |
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197 |
312 |
S=372 I=58 E=2.33449e-37 |
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312 |
445 |
S=330 I=46 E=2.86586e-32 |
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1162 |
1227 |
S=305 I=85 E=2.68943e-29 |
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466 |
567 |
S=290 I=55 E=1.76678e-27 |
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768 |
873 |
S=234 I=42 E=1.19685e-20 |
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874 |
935 |
S=227 I=73 E=8.58595e-20 |
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94 |
203 |
S=188 I=39 E=4.07495e-15 |
Access unfiltered results
Miscellaneous analyses
![]() XFF4834R_chr_0806 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr07370 |
ID | |
AC | XFF4834R_chr07360 |
LT | XFF4834R_chr07360 |
OR | XFF4834R_chr from 851217 to 852635 on strand + |
DE | putative glutamate-cysteine ligase |
IP | Glutamate--cysteine ligase, GCS2; Glutamate--cysteine ligase, plant |
CL | 1.5.1.1 Glutamate GO:0006537 |
EC | |
GO |
InterPro Biological Process: glutathione biosynthetic process (GO:0006750) Molecular Function: glutamate-cysteine ligase activity (GO:0004357) Curated |
PM | |
AN | |
CC | COG: [H] Coenzyme transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by pieretti (20100330) |
MW | 52687.1 Da |
SQ | 472 aa |
........10........20........30........40........50 |
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YP_362513.1 lcl|gsh1-XCV0782 |
1 |
472 |
S=2282 I=92 E=0 |
glutamate-cysteine ligase |
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NP_641081.1 lcl|gsh1-XAC0728 |
24 |
472 |
S=2279 I=96 E=0 |
glutamate-cysteine ligase precursor |
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NP_638742.1 lcl|gsh1-XCC3396 |
24 |
472 |
S=2144 I=90 E=0 |
glutamate-cysteine ligase precursor |
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1 |
472 |
S=1914 I=80 E=0 |
putative glutamate cystein ligase protein |
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25 |
472 |
S=1392 I=58 E=9.08811e-160 |
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit pep |
||
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25 |
472 |
S=1369 I=57 E=4.513e-157 |
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; Alternative splicing ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding |
||
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25 |
472 |
S=1369 I=57 E=5.56341e-157 |
Gamma-glutamylcysteine synthetase ; Transit peptide |
Pubmed 10557236 |
|
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25 |
472 |
S=1363 I=57 E=2.44933e-156 |
Gamma-glutamylcysteine synthetase EC=6.3.2.2 ; Ligase |
Pubmed 16301210 |
|
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25 |
472 |
S=1362 I=57 E=3.23754e-156 |
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit peptide |
Pubmed 10694062 |
|
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25 |
472 |
S=1361 I=57 E=4.66927e-156 |
Gamma-glutamylcysteine synthetase |
Pubmed 14601672 |
|
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25 |
472 |
S=1360 I=57 E=6.22592e-156 |
Gamma-glutamylcysteine synthetase ; Transit peptide |
Pubmed 10557236 |
|
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29 |
472 |
S=1340 I=57 E=1.75417e-153 |
Glutamate--cysteine ligase A, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Tran |
Pubmed 16261349 |
|
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29 |
472 |
S=1333 I=56 E=1.15334e-152 |
Putative gamma-glutamylcysteine synthetase EC=6.3.2.2 ; Ligase |
Pubmed 15047902 |
|
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48 |
390 |
S=1112 I=60 E=7.75077e-126 |
Putative glutathione synthetase GshA |
Pubmed 8825087 |
|
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25 |
472 |
S=1392 I=58 E=6.25343e-160 |
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit pep |
||
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25 |
472 |
S=1369 I=57 E=3.10535e-157 |
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; Alternative splicing ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding |
||
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25 |
472 |
S=1362 I=57 E=2.22772e-156 |
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit peptide |
||
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25 |
472 |
S=1353 I=57 E=2.84132e-155 |
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit peptide |
||
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25 |
472 |
S=1351 I=57 E=4.79413e-155 |
Glutamate--cysteine ligase, chloroplastic EC=6.3.2.2 ; ATP-binding Disulfide bond Glutathione biosynthesis Nucleotide-binding Plastid Transit peptide |
||
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IPR006336 [PF04107] | 77 |
375 |
Glutamate--cysteine ligase, GCS2 |
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IPR011556 [TIGR01436] | 29 |
472 |
Glutamate--cysteine ligase, plant |
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[seg] | 11 |
23 |
- |
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[seg] | 413 |
425 |
- |
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314 |
472 |
S=434 I=55 E=4.81935e-45 |
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29 |
121 |
S=296 I=63 E=2.86554e-28 |
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182 |
242 |
S=294 I=87 E=4.13275e-28 |
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123 |
181 |
S=246 I=64 E=2.7776e-22 |
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243 |
279 |
S=159 I=81 E=1.04563e-11 |
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280 |
311 |
S=146 I=81 E=3.8636e-10 |
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426 |
472 |
S=137 I=55 E=5.19243e-09 |
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426 |
472 |
S=127 I=51 E=8.09318e-08 |
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243 |
306 |
S=114 I=36 E=2.62383e-06 |
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450 |
472 |
S=110 I=91 E=8.5136e-06 |
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[SSF55931] | 41 |
471 |
- |
Access unfiltered results
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Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
13 hits |
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Swiss-Prot ncbi-blastp |
9 hits |
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Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
1 hits |
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HAMAP scan |
0 hits |
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IprScan |
5 hits |
Miscellaneous analyses