Xanthomonas fuscans subsp. fuscans

4 hits

  1. XFF4834R_chr02460XFF4834R_chr02580677_0289195_f2_XFF4834R-XFF4834R_chr02460XFF4834R_chr02460Putative cytochrome c family protein
  2. XFF4834R_chr12250XFF4834R_chr12910306_1387755_f1_XFF4834R-XFF4834R_chr12250XFF4834R_chr12250Putative electron transfer protein azurin I
  3. XFF4834R_chr17360XFF4834R_chr18520017_1987024_f2_XFF4834R-XFF4834R_chr17360XFF4834R_chr17360putative alcohol dehydrogenase
  4. XFF4834R_chr24890XFF4834R_chr27210568_2873569_f2_XFF4834R-XFF4834R_chr24890XFF4834R_chr24890Probable alcohol dehydrogenase

XFF4834R_chr02580677_0289195_f2_XFF4834R-XFF4834R_chr02460 XFF4834R_chr02460
XFF4834R_chr02450
XFF4834R_chr02450 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Framed OrthoMCL XFF4834R_chr02470
XFF4834R_chr02470
ID XFF4834R_chr02580677_0289195_f2_XFF4834R-XFF4834R_chr02460
AC XFF4834R_chr02460
LT XFF4834R_chr02460
OR XFF4834R_chr from 288677 to 289195 on strand +
DE Putative cytochrome c family protein
IP Cytochrome c, class I
CL 1.4.1 Electron donor GO:0009053
EC
GO InterPro
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: heme binding (GO:0020037)
Molecular Function: electron carrier activity (GO:0009055)

Curated
PM
AN
CC COG: [C] Energy production and conversion;
CC MODEL: XFF4834R
CC STATUS: curated by fguerin (20100503)
MW 17966.5 Da
SQ 172 aa
  
........10........20........30........40........50
         |         |         |         |         |
MRNYDLEFLKKFSMVIGLLVVITLGLIALAAYLQRAIPDEVSPTAAKRVL
QRIAPVGAVYAGATGASAQAAAQAAALAKAASQSAYGGTTDGKTIFNNLC
TACHTTGVGKAPTLDHSHWDARIAQGKDTLYKHAIEGYTGPDGGIMPPKG
GNPALTEEQVRATVDWMLGNLK

    






    

        
            
                XFF4834R
            
                
        
NP_640629.1 lcl|XAC0273-XAC0273

        
1

	
172

	
S=635 I=73 E=2.97248e-70

	
cytochrome C5

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362012.1 lcl|XCV0281

        
1

	
172

	
S=628 I=72 E=2.15108e-69

	
putative cytochrome c

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635649.1 lcl|XCC0254

        
1

	
172

	
S=605 I=69 E=1.20686e-66

	
cytochrome C5

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_0152

        
1

	
172

	
S=556 I=63 E=1.06285e-60

	
putative cytochrome c precursor protein

     	

   





    

        
                pubmed
        
        

        
92

	
172

	
S=163 I=41 E=1.74921e-11

	
Cytochrome c-555 ; Electron transport Heme Iron Metal-binding Photosynthesis

	
Pubmed 188412,202947

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
91

	
171

	
S=151 I=38 E=4.36578e-10

	
Cytochrome c-555 ; Electron transport Heme Iron Metal-binding Photosynthesis

	
Pubmed 188412

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
88

	
167

	
S=131 I=33 E=1.04229e-07

	
Probable cytochrome C

	
Pubmed 16514165

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
91

	
167

	
S=123 I=36 E=1.09735e-06

	
Soluble cytochrome cA

	
Pubmed 10781566

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
91

	
167

	
S=122 I=35 E=1.26162e-06

	
Mono-heme c-type cytochrome ScyA

	
Pubmed 11955059

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
91

	
167

	
S=119 I=36 E=3.2633e-06

	
Cytochrome c Cytochrome c, class I ; Signal

	
Pubmed 17142390

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8KG93|C555_CHLTE

        
92

	
172

	
S=176 I=45 E=3.18063e-13

	
Cytochrome c-555 ; Electron transport Heme Iron Metal-binding Photosynthesis Signal

    





    

        
            
                sp_Pdown
            
        
        
sp|P00123|C555_CHLLT

        
92

	
172

	
S=163 I=41 E=1.21695e-11

	
Cytochrome c-555 ; Electron transport Heme Iron Metal-binding Photosynthesis

    





    

        
            
                sp_Pdown
            
        
        
sp|P00124|C555_PROAE

        
91

	
171

	
S=151 I=38 E=3.03733e-10

	
Cytochrome c-555 ; Electron transport Heme Iron Metal-binding Photosynthesis

    





    

        
            
                
            
                
        
PD872872

        
91

	
171

	
S=181 I=45 E=1.77425e-14

    	
    





    

        
            
                
            
                
        
PD693581

        
1

	
55

	
S=180 I=65 E=2.58128e-14

    	
    




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ID


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EC


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PM



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CL

 
  Your email  
 
  Validation code (copy this one pnZ5MRkG)  
 
     



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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            6 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            3 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                0 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr02460.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr02460.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr02460.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr02460.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






XFF4834R_chr12910306_1387755_f1_XFF4834R-XFF4834R_chr12250 XFF4834R_chr12250




    

         
             
            XFF4834R_chr12240
            
XFF4834R_chr12240
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr12260
            
XFF4834R_chr12260
            
        		

    





    

        ID
        XFF4834R_chr12910306_1387755_f1_XFF4834R-XFF4834R_chr12250
    

    

        AC
        XFF4834R_chr12250
    

    

        LT
        XFF4834R_chr12250
    

    

        OR
        XFF4834R_chr from 1387306 to 1387755 on strand +
    

   

        DE
        Putative electron transfer protein azurin I
  

   

        IP
        Cupredoxin; Azurin, proteobacteria
  
  
  
  

        CL
        1.4.1 Electron donor	GO:0009053 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Molecular Function: copper ion binding (GO:0005507)
Molecular Function: electron carrier activity (GO:0009055)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [C] Energy production and conversion; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by fguerin (20100817)
  

  
  


    

        MW
        15885.3 Da
    


    

        SQ
        149 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MKLFSTIAMCALALIAPTAWARTCAVTITGNDQMKFDQSTIKLAPECTQV
ELTLKHSGKMAATVMGHNWVLTKSADFQAVANAGVRSTIADSYLPKADAR
VIAHTKVIGGGDSTTVSFPTSKLSKGADYTFFCSFPGHWAMMKGTLTFG

    





Show or not Domain decomposition
 

    

        
            
                XFF4834R
            
                
        
NP_643729.1 lcl|az1-XAC3422

        
1

	
149

	
S=775 I=98 E=2.31962e-87

	
electron transfer protein azurin I

     	

   





    

        
            
                XFF4834R
            
                
        
YP_365268.1 lcl|XCV3537

        
15

	
149

	
S=708 I=99 E=2.91576e-79

	
putative electron transfer protein azurin I

     	

   





    

        
            
                XFF4834R
            
                
        
NP_638620.1 lcl|az1-XCC3274

        
1

	
149

	
S=657 I=82 E=5.06888e-73

	
electron transfer protein azurin I

     	

   





    

        
                pubmed
        
        

        
3

	
148

	
S=430 I=54 E=5.15246e-44

	
Azurin ; Signal

	
Pubmed 11440141

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
148

	
S=422 I=52 E=5.76602e-43

	
Azurin I ; Signal

	
Pubmed 16832626

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
24

	
148

	
S=400 I=55 E=2.26273e-40

	
Azurin-1 ; Copper Disulfide bond Electron transport Metal-binding Periplasm

	
Pubmed 9761902

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
148

	
S=378 I=51 E=9.77327e-38

	
Azurin ; Copper Disulfide bond Electron transport Metal-binding Periplasm Signal

	
Pubmed 2116366,6842609

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
24

	
149

	
S=376 I=54 E=1.96318e-37

	
Azurin-2 ; Copper Disulfide bond Electron transport Metal-binding Periplasm

	
Pubmed 7640272,15299774

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|P00279|AZUR_ALCSP

        
24

	
148

	
S=409 I=56 E=1.50207e-41

	
Azurin ; Copper Disulfide bond Electron transport Metal-binding Periplasm

    





    

        
            
                sp_Pdown
            
        
        
sp|P0A320|AZUR_BORPE

        
8

	
148

	
S=406 I=51 E=2.93935e-41

	
Azurin ; Copper Disulfide bond Electron transport Metal-binding Periplasm Signal

    





    

        
            
                sp_Pdown
            
        
        
sp|P0A322|AZUR_BORPA

        
8

	
148

	
S=406 I=51 E=2.93935e-41

	
Azurin ; Copper Disulfide bond Electron transport Metal-binding Periplasm Signal

    





    

        
            
                sp_Pdown
            
        
        
sp|P0A321|AZUR_BORBR

        
8

	
148

	
S=406 I=51 E=2.93935e-41

	
Azurin ; Copper Disulfide bond Electron transport Metal-binding Periplasm Signal

    





    

        
            
                sp_Pdown
            
        
        
sp|P56547|AZUR1_ALCXX

        
24

	
148

	
S=400 I=55 E=1.56769e-40

	
Azurin-1 ; Copper Disulfide bond Electron transport Metal-binding Periplasm

    





    

        Iprscan
        IPR008972
	[G3DSA:2.60.40.420]
	
22

	
149

	
	
Cupredoxin

    





    

        Iprscan
        IPR000923
	[PF00127]
	
23

	
147

	
	
Blue (type 1) copper domain

    





    

        Iprscan
        IPR014068
	[TIGR02695]
	
24

	
148

	
	
Azurin, proteobacteria

    





    

        Iprscan
        IPR000923
	[PS00196]
	
126

	
142

	
	
Blue (type 1) copper domain

    





    

        Iprscan
        
	[SignalP-NN(euk)]
	
1

	
21

	
	
-

    





    

        
            
                
            
                
        
PD003655

        
26

	
149

	
S=408 I=61 E=4.97335e-42

    	
    





    

        
            
                
            
                
        
PDA4U7N1

        
1

	
25

	
S=112 I=88 E=4.34665e-06

    	
    





    

        Iprscan
        IPR008972
	[SSF49503]
	
22

	
149

	
	
Cupredoxin

    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


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CL

 
  Your email  
 
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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            17 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            24 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                6 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr12250.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr12250.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr12250.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr12250.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






XFF4834R_chr18520017_1987024_f2_XFF4834R-XFF4834R_chr17360 XFF4834R_chr17360




    

         
             
            XFF4834R_chr_1862
            
XFF4834R_chr_1862
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr17370
            
XFF4834R_chr17370
            
        		

    





    

        ID
        XFF4834R_chr18520017_1987024_f2_XFF4834R-XFF4834R_chr17360
    

    

        AC
        XFF4834R_chr17360
    

    

        LT
        XFF4834R_chr17360
    

    

        OR
        XFF4834R_chr from 1986017 to 1987024 on strand +
    

   

        DE
        putative alcohol dehydrogenase
  

   

        IP
        Alcohol dehydrogenase superfamily, zinc-containing; Polyketide synthase, enoylreductase
  
  
  
  

        CL
        1.4.1 Electron donor	GO:0009053 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: metabolic process (GO:0008152)
Biological Process: oxidation reduction (GO:0055114)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: binding (GO:0005488)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: zinc ion binding (GO:0008270)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [CR] Energy production and conversion;General function prediction only; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by opruvost (20100818)
  

  
  


    

        MW
        34962.5 Da
    


    

        SQ
        335 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MQAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLG
QMPTADGRIPMSDGAGVVEAVGPEVDEFAVGDHVVSTFFPQWLDGEPLHA
GFATTPGDGVDGYARSAVVADAQAFTHAPRGYSHAEAATLTTAGVTAWRA
LAVNGGLKAGDSVLVLGTGGVSIFALQLAKAMGARVIATSSSDEKLEKVR
ALGADHLINYRQHPEWSAQVLDITERRGVDHVVEVGGPGTLTQSIRAARV
GGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRKHQQDLVRALDSL
PLRPVIDRSFALDEIGEAFALQKSGGHLGKIALAF

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr01690 lcl|XFF4834R_chr01850374_0207384_f1_XFF4834R-XFF4834R_chr01690

        
1

	
335

	
S=442 I=37 E=5.25234e-47

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr07970 lcl|qorA-XFF4834R_chr07970

        
14

	
333

	
S=197 I=29 E=2.37826e-17

	
quinone oxidoreductase, NADPH-dependent

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr24890 lcl|XFF4834R_chr27210568_2873569_f2_XFF4834R-XFF4834R_chr24890

        
129

	
263

	
S=147 I=34 E=3.02069e-11

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr10170 lcl|XFF4834R_chr10690144_1153166_r2_XFF4834R-XFF4834R_chr10170

        
14

	
212

	
S=137 I=31 E=4.46824e-10

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr10280 lcl|tdh-XFF4834R_chr10280

        
160

	
335

	
S=125 I=25 E=1.41121e-08

	
threonine 3-dehydrogenase, NAD(P)-binding

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr07420 lcl|frmA-XFF4834R_chr07420

        
136

	
325

	
S=122 I=28 E=2.50901e-08

	
alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr06610 lcl|XFF4834R_chr_0753670_0754776_f1_XFF4834R-XFF4834R_chr06610

        
136

	
319

	
S=105 I=29 E=3.77348e-06

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr21310 lcl|XFF4834R_chr23210834_2474003_f3_XFF4834R-XFF4834R_chr21310

        
120

	
237

	
S=100 I=32 E=1.26784e-05

	

     	

   





    

        
            
                XFF4834R
            
                
        
NP_643205.1 lcl|XAC2896-XAC2896

        
1

	
335

	
S=1587 I=94 E=0

	
alcohol dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_364778.1 lcl|XCV3047

        
1

	
335

	
S=1575 I=93 E=0

	
putative alcohol dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_638078.1 lcl|XCC2730

        
1

	
335

	
S=1434 I=84 E=1.2403e-166

	
alcohol dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_640557.1 lcl|adh-XAC0201

        
1

	
333

	
S=438 I=38 E=5.34304e-46

	
alcohol dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_361916.1 lcl|XCV0185

        
20

	
333

	
S=418 I=38 E=1.5319e-43

	
putative alcohol dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_636133.1 lcl|XCC0742

        
1

	
333

	
S=205 I=30 E=1.05765e-17

	
quinone reductase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362575.1 lcl|XCV0844

        
1

	
333

	
S=194 I=29 E=1.91188e-16

	
putative quinone oxidoreductase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_641146.1 lcl|XAC0794-XAC0794

        
1

	
333

	
S=192 I=29 E=3.34038e-16

	
quinone reductase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_1049

        
14

	
335

	
S=168 I=26 E=2.82335e-13

	
putative zinc-containing alcohol dehydrogenase superfamily protein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_636320.1 lcl|XCC0934

        
1

	
222

	
S=149 I=31 E=5.05516e-11

	
oxidoreductase

     	

   





    

        
                pubmed
        
        

        
21

	
335

	
S=669 I=45 E=2.40841e-72

	
Putative alcohol dehydrogenase zinc-binding domain protein

	
Pubmed 20091296

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
21

	
333

	
S=505 I=39 E=1.93815e-52

	
Alcohol dehydrogenase

	
Pubmed 20146797

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
21

	
333

	
S=480 I=37 E=1.95023e-49

	
NADPH:quinone reductase or related Zn-dependent oxidoreductase Zinc-binding alcohol dehydrogenase

	
Pubmed 18004300

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
160

	
335

	
S=367 I=49 E=8.71839e-36

	
Putative formaldehyde dehydrogenase

	
Pubmed 15743951,9501423

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
112

	
333

	
S=285 I=35 E=8.72159e-26

	
Zn-dependent alcohol dehydrogenase

	
Pubmed 20132279

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|O94564|YGD6_SCHPO

        
23

	
333

	
S=531 I=39 E=7.7681e-56

	
Zinc-type alcohol dehydrogenase-like protein C1773.06c EC=1.-.-.- ; Cytoplasm Oxidoreductase

    





    

        
            
                sp_Pdown
            
        
        
sp|O35017|YOGA_BACSU

        
25

	
333

	
S=277 I=29 E=5.34086e-25

	
Uncharacterized zinc-type alcohol dehydrogenase-like protein yogA EC=1.-.-.- ; Oxidoreductase

    





    

        
            
                sp_Pdown
            
        
        
sp|P42327|ADH2_BACST

        
107

	
335

	
S=217 I=31 E=9.44022e-18

	
Alcohol dehydrogenase EC=1.1.1.1 ; Metal-binding NAD Oxidoreductase Zinc

    





    

        
            
                sp_Pdown
            
        
        
sp|P42328|ADH3_BACST

        
93

	
335

	
S=210 I=31 E=6.77224e-17

	
Alcohol dehydrogenase EC=1.1.1.1 ; Metal-binding NAD Oxidoreductase Zinc

    





    

        
            
                sp_Pdown
            
        
        
sp|P12311|ADH1_BACST

        
107

	
333

	
S=209 I=32 E=8.3485e-17

	
Alcohol dehydrogenase EC=1.1.1.1 ; Metal-binding NAD Oxidoreductase Zinc

    





    

        Iprscan
        IPR016040
	[G3DSA:3.40.50.720]
	
122

	
310

	
	
NAD(P)-binding domain

    





    

        Iprscan
        
	[PTHR11695:SF21]
	
14

	
333

	
	
-

    





    

        Iprscan
        IPR002085
	[PTHR11695]
	
14

	
333

	
	
Alcohol dehydrogenase superfamily, zinc-containing

    





    

        Iprscan
        IPR013149
	[PF00107]
	
170

	
295

	
	
Alcohol dehydrogenase, zinc-binding

    





    

        Iprscan
        IPR013154
	[PF08240]
	
29

	
88

	
	
Alcohol dehydrogenase GroES-like

    





    

        Iprscan
        IPR020843
	[SM00829]
	
13

	
333

	
	
Polyketide synthase, enoylreductase

    





    

        Iprscan
        
	[seg]
	
63

	
77

	
	
-

    





    

        Iprscan
        
	[SignalP-NN(euk)]
	
1

	
21

	
	
-

    





    

        
            
                
            
                
        
PDA6N3V8

        
8

	
51

	
S=212 I=95 E=3.61659e-18

    	
    





    

        
            
                
            
                
        
PD892560

        
92

	
138

	
S=190 I=81 E=1.76489e-15

    	
    





    

        
            
                
            
                
        
PD948077

        
189

	
333

	
S=188 I=31 E=2.97789e-15

    	
    





    

        
            
                
            
                
        
PD698911

        
237

	
285

	
S=171 I=69 E=3.27216e-13

    	
    





    

        
            
                
            
                
        
PDA1I513

        
188

	
236

	
S=140 I=59 E=2.03663e-09

    	
    





    

        
            
                
            
                
        
PDA6N4A8

        
188

	
215

	
S=133 I=89 E=1.48674e-08

    	
    





    

        
            
                
            
                
        
PD715891

        
146

	
262

	
S=130 I=37 E=3.2022e-08

    	
    





    

        
            
                
            
                
        
PDA2P0H2

        
188

	
298

	
S=128 I=32 E=4.99528e-08

    	
    





    

        
            
                
            
                
        
PDA314Q3

        
232

	
297

	
S=120 I=41 E=5.39853e-07

    	
    





    

        
            
                
            
                
        
PDA4B1R4

        
230

	
333

	
S=116 I=29 E=1.60542e-06

    	
    





    

        Iprscan
        IPR016040
	[SSF51735]
	
133

	
302

	
	
NAD(P)-binding domain

    





    

        Iprscan
        IPR011032
	[SSF50129]
	
1

	
163

	
	
GroES-like

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            0 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            310 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            8 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                10 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr17360.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr17360.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr17360.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr17360.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






XFF4834R_chr27210568_2873569_f2_XFF4834R-XFF4834R_chr24890 XFF4834R_chr24890




    

         
             
            XFF4834R_chr24880
            
XFF4834R_chr24880
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr24900
            
XFF4834R_chr24900
            
        		

    





    

        ID
        XFF4834R_chr27210568_2873569_f2_XFF4834R-XFF4834R_chr24890
    

    

        AC
        XFF4834R_chr24890
    

    

        LT
        XFF4834R_chr24890
    

    

        OR
        XFF4834R_chr from 2872568 to 2873569 on strand +
    

   

        DE
        Probable alcohol dehydrogenase
  

   

        IP
        Alcohol dehydrogenase superfamily, zinc-containing; Polyketide synthase, enoylreductase
  
  
  
  

        CL
        1.4.1 Electron donor	GO:0009053 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: metabolic process (GO:0008152)
Biological Process: oxidation reduction (GO:0055114)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: binding (GO:0005488)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: zinc ion binding (GO:0008270)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [CR] Energy production and conversion;General function prediction only; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by opruvost (20100818)
  

  
  


    

        MW
        35912.5 Da
    


    

        SQ
        333 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MKALTFKRYGKSPDIGFSERARPTLQPDELLVEVHAAGVNPIDNMIPTGI
FKPVLKFELPATLGSDVAGIVIDVGSRVTRFKRGDAIFASVFDLGRGTIA
EYVAVPESAAALKPANLDFVQAASLPMVALTSWQALKERADLQPGEKVFI
PAGSGGIGTIAIQLAKHLGATVGTTTSTGNVALVNSLGADEVIDYRQQDF
ETVLRGYDIALGTMRGDTIEKSLAILKPGGRIVSLVGPLDAAFARARRLN
VVLQFVFAMMSRKIIRLANKHNVAYSFLFVRPNGTQLAKIGELLEAERIR
PVIDKVFAFEQAKQALEYLAQGRAKGKVVVKIR

    





Show or not Domain decomposition
 

    

        
            
                XFF4834R
            
                
        
XFF4834R_chr10170 lcl|XFF4834R_chr10690144_1153166_r2_XFF4834R-XFF4834R_chr10170

        
29

	
238

	
S=276 I=36 E=6.26468e-27

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr07970 lcl|qorA-XFF4834R_chr07970

        
18

	
332

	
S=275 I=31 E=8.06691e-27

	
quinone oxidoreductase, NADPH-dependent

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr01690 lcl|XFF4834R_chr01850374_0207384_f1_XFF4834R-XFF4834R_chr01690

        
97

	
331

	
S=172 I=31 E=2.63698e-14

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr17360 lcl|XFF4834R_chr18520017_1987024_f2_XFF4834R-XFF4834R_chr17360

        
29

	
330

	
S=151 I=27 E=7.76082e-12

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr02610 lcl|XFF4834R_chr02730242_0304270_r3_XFF4834R-XFF4834R_chr02610

        
127

	
332

	
S=100 I=27 E=1.45931e-05

	
predicted oxidoreductase, Zn-dependent and NAD(P)-binding

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr07420 lcl|frmA-XFF4834R_chr07420

        
79

	
199

	
S=98 I=31 E=2.19843e-05

	
alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_636133.1 lcl|XCC0742

        
19

	
332

	
S=290 I=33 E=5.36093e-28

	
quinone reductase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_641358.1 lcl|XAC1011-XAC1011

        
29

	
238

	
S=276 I=36 E=2.31745e-26

	
oxidoreductase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362575.1 lcl|XCV0844

        
18

	
332

	
S=274 I=32 E=3.71092e-26

	
putative quinone oxidoreductase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362772.1 lcl|XCV1041

        
29

	
197

	
S=271 I=39 E=9.7675e-26

	
putative oxidoreductase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_641146.1 lcl|XAC0794-XAC0794

        
18

	
332

	
S=271 I=31 E=1.03822e-25

	
quinone reductase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_636320.1 lcl|XCC0934

        
29

	
238

	
S=262 I=37 E=1.01942e-24

	
oxidoreductase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_639550.1 lcl|XCC4216

        
1

	
197

	
S=251 I=34 E=2.77612e-23

	
bifunctional oxidoreductase/alginate lyase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_0556

        
29

	
273

	
S=245 I=33 E=1.29912e-22

	
putative oxidoreductase protein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_644643.1 lcl|XAC4349-XAC4349

        
1

	
257

	
S=187 I=30 E=1.42155e-15

	
alginate lyase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_640557.1 lcl|adh-XAC0201

        
97

	
332

	
S=175 I=31 E=4.04372e-14

	
alcohol dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_363901.1 lcl|XCV2170

        
19

	
233

	
S=168 I=29 E=3.27749e-13

	
putative oxidoreductase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_361916.1 lcl|XCV0185

        
92

	
332

	
S=166 I=31 E=5.02436e-13

	
putative alcohol dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_643205.1 lcl|XAC2896-XAC2896

        
29

	
331

	
S=154 I=27 E=1.57308e-11

	
alcohol dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_638078.1 lcl|XCC2730

        
29

	
331

	
S=153 I=28 E=1.88915e-11

	
alcohol dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_366191.1 lcl|XCV4460

        
1

	
331

	
S=151 I=27 E=3.47794e-11

	
putative oxidoreductase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_364778.1 lcl|XCV3047

        
29

	
198

	
S=145 I=30 E=1.7604e-10

	
putative alcohol dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_3020

        
127

	
332

	
S=115 I=27 E=7.14745e-07

	
putative zinc-containing alcohol dehydrogenase superfamily protein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_640643.1 lcl|XAC0287-XAC0287

        
127

	
332

	
S=105 I=26 E=1.32627e-05

	
quinone oxidoreductase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_638735.1 lcl|XCC3389

        
79

	
199

	
S=101 I=31 E=3.94406e-05

	
alcohol dehydrogenase C

     	

   





    

        
            
                XFF4834R
            
                
        
NP_641087.1 lcl|XAC0734-XAC0734

        
79

	
199

	
S=98 I=31 E=7.99191e-05

	
alcohol dehydrogenase C

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362519.1 lcl|XCV0788

        
79

	
199

	
S=98 I=31 E=8.42111e-05

	
putative alcohol dehydrogenase class III

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635665.1 lcl|XCC0270

        
127

	
332

	
S=98 I=25 E=9.18829e-05

	
quinone oxidoreductase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_1049

        
114

	
199

	
S=98 I=32 E=9.68175e-05

	
putative zinc-containing alcohol dehydrogenase superfamily protein

     	

   





    

        
            
                XFF4834R
            
                
        
YP_364064.1 lcl|XCV2333

        
114

	
235

	
S=98 I=32 E=9.85205e-05

	
putative Zn-dependent alcohol dehydrogenase

     	

   





    

        
                pubmed
        
        

        
1

	
333

	
S=855 I=51 E=7.23969e-95

	
Predicted zinc-binding oxidoreductase

	
Pubmed 9434161,10094695

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
22

	
332

	
S=471 I=38 E=2.62172e-48

	
Putative oxidoreductase

	
Pubmed 10627032

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
332

	
S=455 I=35 E=2.0504e-46

	
Reticulon-4-interacting protein 1, mitochondrial ; Mitochondrion Transit peptide

	
Pubmed 12067236

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
238

	
S=356 I=39 E=2.23428e-34

	
Quinone oxidoreductase

	
Pubmed 16517758

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
238

	
S=353 I=40 E=4.52735e-34

	
Putative quinone oxidoreductase

	
Pubmed 16517758

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q7T3C7|RT4I1_DANRE

        
1

	
332

	
S=472 I=34 E=1.07601e-48

	
Reticulon-4-interacting protein 1 homolog, mitochondrial ; Mitochondrion Transit peptide

    





    

        
            
                sp_Pdown
            
        
        
sp|Q924D0|RT4I1_MOUSE

        
1

	
332

	
S=455 I=35 E=1.39536e-46

	
Reticulon-4-interacting protein 1, mitochondrial ; Mitochondrion Transit peptide

    





    

        
            
                sp_Pdown
            
        
        
sp|Q0VC50|RT4I1_BOVIN

        
1

	
332

	
S=451 I=34 E=3.67272e-46

	
Reticulon-4-interacting protein 1, mitochondrial ; Mitochondrion Transit peptide

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8WWV3|RT4I1_HUMAN

        
1

	
332

	
S=446 I=35 E=1.6311e-45

	
Reticulon-4-interacting protein 1, mitochondrial ; Alternative splicing Mitochondrion Transit peptide

    





    

        
            
                sp_Pdown
            
        
        
sp|Q9ZUC1|QORL_ARATH

        
1

	
237

	
S=374 I=38 E=8.34528e-37

	
Quinone oxidoreductase-like protein At1g23740, chloroplastic EC=1.-.-.- ; NAD Plastid Transit peptide

    





    

        Iprscan
        IPR016040
	[G3DSA:3.40.50.720]
	
107

	
307

	
	
NAD(P)-binding domain

    





    

        Iprscan
        
	[PTHR11695:SF34]
	
14

	
332

	
	
-

    





    

        Iprscan
        IPR002085
	[PTHR11695]
	
14

	
332

	
	
Alcohol dehydrogenase superfamily, zinc-containing

    





    

        Iprscan
        IPR013149
	[PF00107]
	
156

	
239

	
	
Alcohol dehydrogenase, zinc-binding

    





    

        Iprscan
        IPR013154
	[PF08240]
	
27

	
89

	
	
Alcohol dehydrogenase GroES-like

    





    

        Iprscan
        IPR020843
	[SM00829]
	
10

	
330

	
	
Polyketide synthase, enoylreductase

    





    

        
            
                
            
                
        
PDA6N3Y9

        
50

	
98

	
S=216 I=82 E=1.21718e-18

    	
    





    

        
            
                
            
                
        
PD024840

        
124

	
333

	
S=215 I=31 E=1.41164e-18

    	
    





    

        
            
                
            
                
        
PD748833

        
217

	
279

	
S=157 I=60 E=1.62763e-11

    	
    





    

        
            
                
            
                
        
PDA0J8H3

        
1

	
125

	
S=155 I=31 E=2.56126e-11

    	
    





    

        
            
                
            
                
        
PDA1U3L7

        
99

	
127

	
S=130 I=90 E=3.52749e-08

    	
    





    

        
            
                
            
                
        
PDA3X2E2

        
125

	
182

	
S=128 I=41 E=4.9561e-08

    	
    





    

        
            
                
            
                
        
PDA307C9

        
90

	
144

	
S=126 I=49 E=8.21783e-08

    	
    





    

        
            
                
            
                
        
PD709193

        
129

	
243

	
S=123 I=30 E=1.89785e-07

    	
    





    

        
            
                
            
                
        
PDA3I1L6

        
80

	
146

	
S=121 I=39 E=3.49395e-07

    	
    





    

        
            
                
            
                
        
PDA2E350

        
24

	
103

	
S=118 I=31 E=9.27696e-07

    	
    





    

        Iprscan
        IPR011032
	[SSF50129]
	
1

	
150

	
	
GroES-like

    





    

        Iprscan
        IPR016040
	[SSF51735]
	
121

	
260

	
	
NAD(P)-binding domain

    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
  Validation code (copy this one JH8zjvLD)  
 
     



Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            0 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            148 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            6 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                8 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr24890.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

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  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr24890.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

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  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr24890.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

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  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBzJAl2s/XFF4834R_chr24890.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

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