Xanthomonas fuscans subsp. fuscans

4 hits

  1. XFF4834R_chr02460XFF4834R_chr02580677_0289195_f2_XFF4834R-XFF4834R_chr02460XFF4834R_chr02460Putative cytochrome c family protein
  2. XFF4834R_chr12250XFF4834R_chr12910306_1387755_f1_XFF4834R-XFF4834R_chr12250XFF4834R_chr12250Putative electron transfer protein azurin I
  3. XFF4834R_chr17360XFF4834R_chr18520017_1987024_f2_XFF4834R-XFF4834R_chr17360XFF4834R_chr17360putative alcohol dehydrogenase
  4. XFF4834R_chr24890XFF4834R_chr27210568_2873569_f2_XFF4834R-XFF4834R_chr24890XFF4834R_chr24890Probable alcohol dehydrogenase

XFF4834R_chr02580677_0289195_f2_XFF4834R-XFF4834R_chr02460 XFF4834R_chr02460
XFF4834R_chr02450
XFF4834R_chr02450 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Framed OrthoMCL XFF4834R_chr02470
XFF4834R_chr02470
ID XFF4834R_chr02580677_0289195_f2_XFF4834R-XFF4834R_chr02460
AC XFF4834R_chr02460
LT XFF4834R_chr02460
OR XFF4834R_chr from 288677 to 289195 on strand +
DE Putative cytochrome c family protein
IP Cytochrome c, class I
CL 1.4.1 Electron donor GO:0009053
EC
GO InterPro
Molecular Function: electron carrier activity (GO:0009055)
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: heme binding (GO:0020037)

Curated
PM
AN
CC COG: [C] Energy production and conversion;
CC MODEL: XFF4834R
CC STATUS: curated by fguerin (20100503)
MW 17966.5 Da
SQ 172 aa
  
........10........20........30........40........50
         |         |         |         |         |
MRNYDLEFLKKFSMVIGLLVVITLGLIALAAYLQRAIPDEVSPTAAKRVL
QRIAPVGAVYAGATGASAQAAAQAAALAKAASQSAYGGTTDGKTIFNNLC
TACHTTGVGKAPTLDHSHWDARIAQGKDTLYKHAIEGYTGPDGGIMPPKG
GNPALTEEQVRATVDWMLGNLK

    






    

        
            
                X.species
            
                
        
NP_640629.1 lcl|XAC0273-XAC0273

        
1

	
172

	
S=635 I=73 E=2.97248e-70

	
cytochrome C5

     	

   





    

        
            
                X.species
            
                
        
YP_362012.1 lcl|XCV0281

        
1

	
172

	
S=628 I=72 E=2.15108e-69

	
putative cytochrome c

     	

   





    

        
            
                X.species
            
                
        
NP_635649.1 lcl|XCC0254

        
1

	
172

	
S=605 I=69 E=1.20686e-66

	
cytochrome C5

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_0152

        
1

	
172

	
S=556 I=63 E=1.06285e-60

	
putative cytochrome c precursor protein

     	

   





    

        
                pubmed
        
        

        
92

	
172

	
S=163 I=41 E=1.74921e-11

	
Cytochrome c-555 ; Electron transport Heme Iron Metal-binding Photosynthesis

	
Pubmed 188412,202947

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
91

	
171

	
S=151 I=38 E=4.36578e-10

	
Cytochrome c-555 ; Electron transport Heme Iron Metal-binding Photosynthesis

	
Pubmed 188412

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
88

	
167

	
S=131 I=33 E=1.04229e-07

	
Probable cytochrome C

	
Pubmed 16514165

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
91

	
167

	
S=123 I=36 E=1.09735e-06

	
Soluble cytochrome cA

	
Pubmed 10781566

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
91

	
167

	
S=122 I=35 E=1.26162e-06

	
Mono-heme c-type cytochrome ScyA

	
Pubmed 11955059

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
91

	
167

	
S=119 I=36 E=3.2633e-06

	
Cytochrome c Cytochrome c, class I ; Signal

	
Pubmed 17142390

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
92

	
172

	
S=176 I=45 E=3.18063e-13

	
Cytochrome c-555 ; Electron transport Heme Iron Metal-binding Photosynthesis Signal

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
92

	
172

	
S=163 I=41 E=1.21695e-11

	
Cytochrome c-555 ; Electron transport Heme Iron Metal-binding Photosynthesis

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
91

	
171

	
S=151 I=38 E=3.03733e-10

	
Cytochrome c-555 ; Electron transport Heme Iron Metal-binding Photosynthesis

	

    

    

         
        
prodomImg

    





    

        
            
                
            
                
        
PD872872

        
91

	
171

	
S=181 I=45 E=1.77425e-14

    	
    





    

        
            
                
            
                
        
PD693581

        
1

	
55

	
S=180 I=65 E=2.58128e-14

    	
    




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ID


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EC


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PM



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CL

 
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  Validation code (copy this one I0HpBVlv)  
 
     



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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            6 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            3 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                0 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr02460.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr02460.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr02460.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr02460.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






XFF4834R_chr12910306_1387755_f1_XFF4834R-XFF4834R_chr12250 XFF4834R_chr12250




    

         
             
            XFF4834R_chr12240
            
XFF4834R_chr12240
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr12260
            
XFF4834R_chr12260
            
        		

    





    

        ID
        XFF4834R_chr12910306_1387755_f1_XFF4834R-XFF4834R_chr12250
    

    

        AC
        XFF4834R_chr12250
    

    

        LT
        XFF4834R_chr12250
    

    

        OR
        XFF4834R_chr from 1387306 to 1387755 on strand +
    

   

        DE
        Putative electron transfer protein azurin I
  

   

        IP
        Cupredoxin; Azurin, proteobacteria
  
  
  
  

        CL
        1.4.1 Electron donor	GO:0009053 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Molecular Function: copper ion binding (GO:0005507)
Molecular Function: electron carrier activity (GO:0009055)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [C] Energy production and conversion; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by fguerin (20100817)
  

  
  


    

        MW
        15885.3 Da
    


    

        SQ
        149 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MKLFSTIAMCALALIAPTAWARTCAVTITGNDQMKFDQSTIKLAPECTQV
ELTLKHSGKMAATVMGHNWVLTKSADFQAVANAGVRSTIADSYLPKADAR
VIAHTKVIGGGDSTTVSFPTSKLSKGADYTFFCSFPGHWAMMKGTLTFG

    





Show or not Domain decomposition
 

    

        
            
                X.species
            
                
        
NP_643729.1 lcl|az1-XAC3422

        
1

	
149

	
S=775 I=98 E=2.31962e-87

	
electron transfer protein azurin I

     	

   





    

        
            
                X.species
            
                
        
YP_365268.1 lcl|XCV3537

        
15

	
149

	
S=708 I=99 E=2.91576e-79

	
putative electron transfer protein azurin I

     	

   





    

        
            
                X.species
            
                
        
NP_638620.1 lcl|az1-XCC3274

        
1

	
149

	
S=657 I=82 E=5.06888e-73

	
electron transfer protein azurin I

     	

   





    

        
                pubmed
        
        

        
3

	
148

	
S=430 I=54 E=5.15246e-44

	
Azurin ; Signal

	
Pubmed 11440141

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
148

	
S=422 I=52 E=5.76602e-43

	
Azurin I ; Signal

	
Pubmed 16832626

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
24

	
148

	
S=400 I=55 E=2.26273e-40

	
Azurin-1 ; Copper Disulfide bond Electron transport Metal-binding Periplasm

	
Pubmed 9761902

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
148

	
S=378 I=51 E=9.77327e-38

	
Azurin ; Copper Disulfide bond Electron transport Metal-binding Periplasm Signal

	
Pubmed 2116366,6842609

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
24

	
149

	
S=376 I=54 E=1.96318e-37

	
Azurin-2 ; Copper Disulfide bond Electron transport Metal-binding Periplasm

	
Pubmed 7640272,15299774

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
24

	
148

	
S=409 I=56 E=1.50207e-41

	
Azurin ; Copper Disulfide bond Electron transport Metal-binding Periplasm

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
8

	
148

	
S=406 I=51 E=2.93935e-41

	
Azurin ; Copper Disulfide bond Electron transport Metal-binding Periplasm Signal

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
8

	
148

	
S=406 I=51 E=2.93935e-41

	
Azurin ; Copper Disulfide bond Electron transport Metal-binding Periplasm Signal

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
8

	
148

	
S=406 I=51 E=2.93935e-41

	
Azurin ; Copper Disulfide bond Electron transport Metal-binding Periplasm Signal

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
24

	
148

	
S=400 I=55 E=1.56769e-40

	
Azurin-1 ; Copper Disulfide bond Electron transport Metal-binding Periplasm

	

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR008972
	[G3DSA:2.60.40.420]
	
22

	
149

	
	
Cupredoxin

    





    

        Iprscan
        IPR000923
	[PF00127]
	
23

	
147

	
	
Blue (type 1) copper domain

    





    

        Iprscan
        IPR014068
	[TIGR02695]
	
24

	
148

	
	
Azurin, proteobacteria

    





    

        Iprscan
        IPR000923
	[PS00196]
	
126

	
142

	
	
Blue (type 1) copper domain

    





    

        Iprscan
        
	[SignalP-NN(euk)]
	
1

	
21

	
	
-

    





    

        
            
                
            
                
        
PD003655

        
26

	
149

	
S=408 I=61 E=4.97335e-42

    	
    





    

        
            
                
            
                
        
PDA4U7N1

        
1

	
25

	
S=112 I=88 E=4.34665e-06

    	
    





    

        Iprscan
        IPR008972
	[SSF49503]
	
22

	
149

	
	
Cupredoxin

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            17 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            24 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                6 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr12250.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr12250.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr12250.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr12250.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






XFF4834R_chr18520017_1987024_f2_XFF4834R-XFF4834R_chr17360 XFF4834R_chr17360




    

         
             
            XFF4834R_chr_1862
            
XFF4834R_chr_1862
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr17370
            
XFF4834R_chr17370
            
        		

    





    

        ID
        XFF4834R_chr18520017_1987024_f2_XFF4834R-XFF4834R_chr17360
    

    

        AC
        XFF4834R_chr17360
    

    

        LT
        XFF4834R_chr17360
    

    

        OR
        XFF4834R_chr from 1986017 to 1987024 on strand +
    

   

        DE
        putative alcohol dehydrogenase
  

   

        IP
        Alcohol dehydrogenase superfamily, zinc-containing; Polyketide synthase, enoylreductase
  
  
  
  

        CL
        1.4.1 Electron donor	GO:0009053 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: metabolic process (GO:0008152)
Biological Process: oxidation reduction (GO:0055114)
Molecular Function: zinc ion binding (GO:0008270)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: binding (GO:0005488)
Molecular Function: oxidoreductase activity (GO:0016491)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [CR] Energy production and conversion;General function prediction only; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by opruvost (20100818)
  

  
  


    

        MW
        34962.5 Da
    


    

        SQ
        335 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MQAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLG
QMPTADGRIPMSDGAGVVEAVGPEVDEFAVGDHVVSTFFPQWLDGEPLHA
GFATTPGDGVDGYARSAVVADAQAFTHAPRGYSHAEAATLTTAGVTAWRA
LAVNGGLKAGDSVLVLGTGGVSIFALQLAKAMGARVIATSSSDEKLEKVR
ALGADHLINYRQHPEWSAQVLDITERRGVDHVVEVGGPGTLTQSIRAARV
GGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRKHQQDLVRALDSL
PLRPVIDRSFALDEIGEAFALQKSGGHLGKIALAF

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr01690 lcl|XFF4834R_chr01850374_0207384_f1_XFF4834R-XFF4834R_chr01690

        
1

	
335

	
S=442 I=37 E=5.25234e-47

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr07970 lcl|qorA-XFF4834R_chr07970

        
14

	
333

	
S=197 I=29 E=2.37826e-17

	
quinone oxidoreductase, NADPH-dependent

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr24890 lcl|XFF4834R_chr27210568_2873569_f2_XFF4834R-XFF4834R_chr24890

        
129

	
263

	
S=147 I=34 E=3.02069e-11

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr10170 lcl|XFF4834R_chr10690144_1153166_r2_XFF4834R-XFF4834R_chr10170

        
14

	
212

	
S=137 I=31 E=4.46824e-10

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr10280 lcl|tdh-XFF4834R_chr10280

        
160

	
335

	
S=125 I=25 E=1.41121e-08

	
threonine 3-dehydrogenase, NAD(P)-binding

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr07420 lcl|frmA-XFF4834R_chr07420

        
136

	
325

	
S=122 I=28 E=2.50901e-08

	
alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr06610 lcl|XFF4834R_chr_0753670_0754776_f1_XFF4834R-XFF4834R_chr06610

        
136

	
319

	
S=105 I=29 E=3.77348e-06

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr21310 lcl|XFF4834R_chr23210834_2474003_f3_XFF4834R-XFF4834R_chr21310

        
120

	
237

	
S=100 I=32 E=1.26784e-05

	

     	

   





    

        
            
                X.species
            
                
        
NP_643205.1 lcl|XAC2896-XAC2896

        
1

	
335

	
S=1587 I=94 E=0

	
alcohol dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
YP_364778.1 lcl|XCV3047

        
1

	
335

	
S=1575 I=93 E=0

	
putative alcohol dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
NP_638078.1 lcl|XCC2730

        
1

	
335

	
S=1434 I=84 E=1.2403e-166

	
alcohol dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
NP_640557.1 lcl|adh-XAC0201

        
1

	
333

	
S=438 I=38 E=5.34304e-46

	
alcohol dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
YP_361916.1 lcl|XCV0185

        
20

	
333

	
S=418 I=38 E=1.5319e-43

	
putative alcohol dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
NP_636133.1 lcl|XCC0742

        
1

	
333

	
S=205 I=30 E=1.05765e-17

	
quinone reductase

     	

   





    

        
            
                X.species
            
                
        
YP_362575.1 lcl|XCV0844

        
1

	
333

	
S=194 I=29 E=1.91188e-16

	
putative quinone oxidoreductase

     	

   





    

        
            
                X.species
            
                
        
NP_641146.1 lcl|XAC0794-XAC0794

        
1

	
333

	
S=192 I=29 E=3.34038e-16

	
quinone reductase

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_1049

        
14

	
335

	
S=168 I=26 E=2.82335e-13

	
putative zinc-containing alcohol dehydrogenase superfamily protein

     	

   





    

        
            
                X.species
            
                
        
NP_636320.1 lcl|XCC0934

        
1

	
222

	
S=149 I=31 E=5.05516e-11

	
oxidoreductase

     	

   





    

        
                pubmed
        
        

        
21

	
335

	
S=669 I=45 E=2.40841e-72

	
Putative alcohol dehydrogenase zinc-binding domain protein

	
Pubmed 20091296

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
21

	
333

	
S=505 I=39 E=1.93815e-52

	
Alcohol dehydrogenase

	
Pubmed 20146797

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
21

	
333

	
S=480 I=37 E=1.95023e-49

	
NADPH:quinone reductase or related Zn-dependent oxidoreductase Zinc-binding alcohol dehydrogenase

	
Pubmed 18004300

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
160

	
335

	
S=367 I=49 E=8.71839e-36

	
Putative formaldehyde dehydrogenase

	
Pubmed 15743951,9501423

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
112

	
333

	
S=285 I=35 E=8.72159e-26

	
Zn-dependent alcohol dehydrogenase

	
Pubmed 20132279

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
23

	
333

	
S=531 I=39 E=7.7681e-56

	
Zinc-type alcohol dehydrogenase-like protein C1773.06c EC=1.-.-.- ; Cytoplasm Oxidoreductase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
25

	
333

	
S=277 I=29 E=5.34086e-25

	
Uncharacterized zinc-type alcohol dehydrogenase-like protein yogA EC=1.-.-.- ; Oxidoreductase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
107

	
335

	
S=217 I=31 E=9.44022e-18

	
Alcohol dehydrogenase EC=1.1.1.1 ; Metal-binding NAD Oxidoreductase Zinc

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
93

	
335

	
S=210 I=31 E=6.77224e-17

	
Alcohol dehydrogenase EC=1.1.1.1 ; Metal-binding NAD Oxidoreductase Zinc

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
107

	
333

	
S=209 I=32 E=8.3485e-17

	
Alcohol dehydrogenase EC=1.1.1.1 ; Metal-binding NAD Oxidoreductase Zinc

	

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR016040
	[G3DSA:3.40.50.720]
	
122

	
310

	
	
NAD(P)-binding domain

    





    

        Iprscan
        
	[PTHR11695:SF21]
	
14

	
333

	
	
-

    





    

        Iprscan
        IPR002085
	[PTHR11695]
	
14

	
333

	
	
Alcohol dehydrogenase superfamily, zinc-containing

    





    

        Iprscan
        IPR013149
	[PF00107]
	
170

	
295

	
	
Alcohol dehydrogenase, zinc-binding

    





    

        Iprscan
        IPR013154
	[PF08240]
	
29

	
88

	
	
Alcohol dehydrogenase GroES-like

    





    

        Iprscan
        IPR020843
	[SM00829]
	
13

	
333

	
	
Polyketide synthase, enoylreductase

    





    

        Iprscan
        
	[seg]
	
63

	
77

	
	
-

    





    

        Iprscan
        
	[SignalP-NN(euk)]
	
1

	
21

	
	
-

    





    

        
            
                
            
                
        
PDA6N3V8

        
8

	
51

	
S=212 I=95 E=3.61659e-18

    	
    





    

        
            
                
            
                
        
PD892560

        
92

	
138

	
S=190 I=81 E=1.76489e-15

    	
    





    

        
            
                
            
                
        
PD948077

        
189

	
333

	
S=188 I=31 E=2.97789e-15

    	
    





    

        
            
                
            
                
        
PD698911

        
237

	
285

	
S=171 I=69 E=3.27216e-13

    	
    





    

        
            
                
            
                
        
PDA1I513

        
188

	
236

	
S=140 I=59 E=2.03663e-09

    	
    





    

        
            
                
            
                
        
PDA6N4A8

        
188

	
215

	
S=133 I=89 E=1.48674e-08

    	
    





    

        
            
                
            
                
        
PD715891

        
146

	
262

	
S=130 I=37 E=3.2022e-08

    	
    





    

        
            
                
            
                
        
PDA2P0H2

        
188

	
298

	
S=128 I=32 E=4.99528e-08

    	
    





    

        
            
                
            
                
        
PDA314Q3

        
232

	
297

	
S=120 I=41 E=5.39853e-07

    	
    





    

        
            
                
            
                
        
PDA4B1R4

        
230

	
333

	
S=116 I=29 E=1.60542e-06

    	
    





    

        Iprscan
        IPR016040
	[SSF51735]
	
133

	
302

	
	
NAD(P)-binding domain

    





    

        Iprscan
        IPR011032
	[SSF50129]
	
1

	
163

	
	
GroES-like

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            0 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            310 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            8 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                10 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr17360.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr17360.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr17360.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr17360.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






XFF4834R_chr27210568_2873569_f2_XFF4834R-XFF4834R_chr24890 XFF4834R_chr24890




    

         
             
            XFF4834R_chr24880
            
XFF4834R_chr24880
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr24900
            
XFF4834R_chr24900
            
        		

    





    

        ID
        XFF4834R_chr27210568_2873569_f2_XFF4834R-XFF4834R_chr24890
    

    

        AC
        XFF4834R_chr24890
    

    

        LT
        XFF4834R_chr24890
    

    

        OR
        XFF4834R_chr from 2872568 to 2873569 on strand +
    

   

        DE
        Probable alcohol dehydrogenase
  

   

        IP
        Alcohol dehydrogenase superfamily, zinc-containing; Polyketide synthase, enoylreductase
  
  
  
  

        CL
        1.4.1 Electron donor	GO:0009053 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: oxidation reduction (GO:0055114)
Biological Process: metabolic process (GO:0008152)
Molecular Function: binding (GO:0005488)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: zinc ion binding (GO:0008270)
Molecular Function: oxidoreductase activity (GO:0016491)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [CR] Energy production and conversion;General function prediction only; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by opruvost (20100818)
  

  
  


    

        MW
        35912.5 Da
    


    

        SQ
        333 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MKALTFKRYGKSPDIGFSERARPTLQPDELLVEVHAAGVNPIDNMIPTGI
FKPVLKFELPATLGSDVAGIVIDVGSRVTRFKRGDAIFASVFDLGRGTIA
EYVAVPESAAALKPANLDFVQAASLPMVALTSWQALKERADLQPGEKVFI
PAGSGGIGTIAIQLAKHLGATVGTTTSTGNVALVNSLGADEVIDYRQQDF
ETVLRGYDIALGTMRGDTIEKSLAILKPGGRIVSLVGPLDAAFARARRLN
VVLQFVFAMMSRKIIRLANKHNVAYSFLFVRPNGTQLAKIGELLEAERIR
PVIDKVFAFEQAKQALEYLAQGRAKGKVVVKIR

    





Show or not Domain decomposition
 

    

        
            
                XFF4834R
            
                
        
XFF4834R_chr10170 lcl|XFF4834R_chr10690144_1153166_r2_XFF4834R-XFF4834R_chr10170

        
29

	
238

	
S=276 I=36 E=6.26468e-27

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr07970 lcl|qorA-XFF4834R_chr07970

        
18

	
332

	
S=275 I=31 E=8.06691e-27

	
quinone oxidoreductase, NADPH-dependent

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr01690 lcl|XFF4834R_chr01850374_0207384_f1_XFF4834R-XFF4834R_chr01690

        
97

	
331

	
S=172 I=31 E=2.63698e-14

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr17360 lcl|XFF4834R_chr18520017_1987024_f2_XFF4834R-XFF4834R_chr17360

        
29

	
330

	
S=151 I=27 E=7.76082e-12

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr02610 lcl|XFF4834R_chr02730242_0304270_r3_XFF4834R-XFF4834R_chr02610

        
127

	
332

	
S=100 I=27 E=1.45931e-05

	
predicted oxidoreductase, Zn-dependent and NAD(P)-binding

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr07420 lcl|frmA-XFF4834R_chr07420

        
79

	
199

	
S=98 I=31 E=2.19843e-05

	
alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
NP_636133.1 lcl|XCC0742

        
19

	
332

	
S=290 I=33 E=5.36093e-28

	
quinone reductase

     	

   





    

        
            
                X.species
            
                
        
NP_641358.1 lcl|XAC1011-XAC1011

        
29

	
238

	
S=276 I=36 E=2.31745e-26

	
oxidoreductase

     	

   





    

        
            
                X.species
            
                
        
YP_362575.1 lcl|XCV0844

        
18

	
332

	
S=274 I=32 E=3.71092e-26

	
putative quinone oxidoreductase

     	

   





    

        
            
                X.species
            
                
        
YP_362772.1 lcl|XCV1041

        
29

	
197

	
S=271 I=39 E=9.7675e-26

	
putative oxidoreductase

     	

   





    

        
            
                X.species
            
                
        
NP_641146.1 lcl|XAC0794-XAC0794

        
18

	
332

	
S=271 I=31 E=1.03822e-25

	
quinone reductase

     	

   





    

        
            
                X.species
            
                
        
NP_636320.1 lcl|XCC0934

        
29

	
238

	
S=262 I=37 E=1.01942e-24

	
oxidoreductase

     	

   





    

        
            
                X.species
            
                
        
NP_639550.1 lcl|XCC4216

        
1

	
197

	
S=251 I=34 E=2.77612e-23

	
bifunctional oxidoreductase/alginate lyase

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_0556

        
29

	
273

	
S=245 I=33 E=1.29912e-22

	
putative oxidoreductase protein

     	

   





    

        
            
                X.species
            
                
        
NP_644643.1 lcl|XAC4349-XAC4349

        
1

	
257

	
S=187 I=30 E=1.42155e-15

	
alginate lyase

     	

   





    

        
            
                X.species
            
                
        
NP_640557.1 lcl|adh-XAC0201

        
97

	
332

	
S=175 I=31 E=4.04372e-14

	
alcohol dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
YP_363901.1 lcl|XCV2170

        
19

	
233

	
S=168 I=29 E=3.27749e-13

	
putative oxidoreductase

     	

   





    

        
            
                X.species
            
                
        
YP_361916.1 lcl|XCV0185

        
92

	
332

	
S=166 I=31 E=5.02436e-13

	
putative alcohol dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
NP_643205.1 lcl|XAC2896-XAC2896

        
29

	
331

	
S=154 I=27 E=1.57308e-11

	
alcohol dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
NP_638078.1 lcl|XCC2730

        
29

	
331

	
S=153 I=28 E=1.88915e-11

	
alcohol dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
YP_366191.1 lcl|XCV4460

        
1

	
331

	
S=151 I=27 E=3.47794e-11

	
putative oxidoreductase

     	

   





    

        
            
                X.species
            
                
        
YP_364778.1 lcl|XCV3047

        
29

	
198

	
S=145 I=30 E=1.7604e-10

	
putative alcohol dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_3020

        
127

	
332

	
S=115 I=27 E=7.14745e-07

	
putative zinc-containing alcohol dehydrogenase superfamily protein

     	

   





    

        
            
                X.species
            
                
        
NP_640643.1 lcl|XAC0287-XAC0287

        
127

	
332

	
S=105 I=26 E=1.32627e-05

	
quinone oxidoreductase

     	

   





    

        
            
                X.species
            
                
        
NP_638735.1 lcl|XCC3389

        
79

	
199

	
S=101 I=31 E=3.94406e-05

	
alcohol dehydrogenase C

     	

   





    

        
            
                X.species
            
                
        
NP_641087.1 lcl|XAC0734-XAC0734

        
79

	
199

	
S=98 I=31 E=7.99191e-05

	
alcohol dehydrogenase C

     	

   





    

        
            
                X.species
            
                
        
YP_362519.1 lcl|XCV0788

        
79

	
199

	
S=98 I=31 E=8.42111e-05

	
putative alcohol dehydrogenase class III

     	

   





    

        
            
                X.species
            
                
        
NP_635665.1 lcl|XCC0270

        
127

	
332

	
S=98 I=25 E=9.18829e-05

	
quinone oxidoreductase

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_1049

        
114

	
199

	
S=98 I=32 E=9.68175e-05

	
putative zinc-containing alcohol dehydrogenase superfamily protein

     	

   





    

        
            
                X.species
            
                
        
YP_364064.1 lcl|XCV2333

        
114

	
235

	
S=98 I=32 E=9.85205e-05

	
putative Zn-dependent alcohol dehydrogenase

     	

   





    

        
                pubmed
        
        

        
1

	
333

	
S=855 I=51 E=7.23969e-95

	
Predicted zinc-binding oxidoreductase

	
Pubmed 9434161,10094695

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
22

	
332

	
S=471 I=38 E=2.62172e-48

	
Putative oxidoreductase

	
Pubmed 10627032

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
332

	
S=455 I=35 E=2.0504e-46

	
Reticulon-4-interacting protein 1, mitochondrial ; Mitochondrion Transit peptide

	
Pubmed 12067236

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
238

	
S=356 I=39 E=2.23428e-34

	
Quinone oxidoreductase

	
Pubmed 16517758

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
238

	
S=353 I=40 E=4.52735e-34

	
Putative quinone oxidoreductase

	
Pubmed 16517758

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
332

	
S=472 I=34 E=1.07601e-48

	
Reticulon-4-interacting protein 1 homolog, mitochondrial ; Mitochondrion Transit peptide

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
332

	
S=455 I=35 E=1.39536e-46

	
Reticulon-4-interacting protein 1, mitochondrial ; Mitochondrion Transit peptide

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
332

	
S=451 I=34 E=3.67272e-46

	
Reticulon-4-interacting protein 1, mitochondrial ; Mitochondrion Transit peptide

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
332

	
S=446 I=35 E=1.6311e-45

	
Reticulon-4-interacting protein 1, mitochondrial ; Alternative splicing Mitochondrion Transit peptide

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
237

	
S=374 I=38 E=8.34528e-37

	
Quinone oxidoreductase-like protein At1g23740, chloroplastic EC=1.-.-.- ; NAD Plastid Transit peptide

	

    

    

         
        
prodomImg

    





    

        Iprscan
        IPR016040
	[G3DSA:3.40.50.720]
	
107

	
307

	
	
NAD(P)-binding domain

    





    

        Iprscan
        
	[PTHR11695:SF34]
	
14

	
332

	
	
-

    





    

        Iprscan
        IPR002085
	[PTHR11695]
	
14

	
332

	
	
Alcohol dehydrogenase superfamily, zinc-containing

    





    

        Iprscan
        IPR013149
	[PF00107]
	
156

	
239

	
	
Alcohol dehydrogenase, zinc-binding

    





    

        Iprscan
        IPR013154
	[PF08240]
	
27

	
89

	
	
Alcohol dehydrogenase GroES-like

    





    

        Iprscan
        IPR020843
	[SM00829]
	
10

	
330

	
	
Polyketide synthase, enoylreductase

    





    

        
            
                
            
                
        
PDA6N3Y9

        
50

	
98

	
S=216 I=82 E=1.21718e-18

    	
    





    

        
            
                
            
                
        
PD024840

        
124

	
333

	
S=215 I=31 E=1.41164e-18

    	
    





    

        
            
                
            
                
        
PD748833

        
217

	
279

	
S=157 I=60 E=1.62763e-11

    	
    





    

        
            
                
            
                
        
PDA0J8H3

        
1

	
125

	
S=155 I=31 E=2.56126e-11

    	
    





    

        
            
                
            
                
        
PDA1U3L7

        
99

	
127

	
S=130 I=90 E=3.52749e-08

    	
    





    

        
            
                
            
                
        
PDA3X2E2

        
125

	
182

	
S=128 I=41 E=4.9561e-08

    	
    





    

        
            
                
            
                
        
PDA307C9

        
90

	
144

	
S=126 I=49 E=8.21783e-08

    	
    





    

        
            
                
            
                
        
PD709193

        
129

	
243

	
S=123 I=30 E=1.89785e-07

    	
    





    

        
            
                
            
                
        
PDA3I1L6

        
80

	
146

	
S=121 I=39 E=3.49395e-07

    	
    





    

        
            
                
            
                
        
PDA2E350

        
24

	
103

	
S=118 I=31 E=9.27696e-07

    	
    





    

        Iprscan
        IPR011032
	[SSF50129]
	
1

	
150

	
	
GroES-like

    





    

        Iprscan
        IPR016040
	[SSF51735]
	
121

	
260

	
	
NAD(P)-binding domain

    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            0 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            148 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            6 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                8 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr24890.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

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  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr24890.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

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  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr24890.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

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  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZVX8pi/XFF4834R_chr24890.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

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