Xanthomonas fuscans subsp. fuscans

3 hits

  1. XFF4834R_chr07420frmAXFF4834R_chr07420Probable formaldehyde dehydrogenase (Glutathione) FrmA
  2. XFF4834R_chr07430XFF4834R_chr07840950_0859525_f2_XFF4834R-XFF4834R_chr07430XFF4834R_chr07430glutathione-dependent formaldehyde-activating enzyme
  3. XFF4834R_chr07440frmBXFF4834R_chr07440probable S-formylglutathione hydrolase FrmB

frmA XFF4834R_chr07420
XFF4834R_chr07410
XFF4834R_chr07410 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Framed OrthoMCL XFF4834R_chr07430
XFF4834R_chr07430
ID frmA
AC XFF4834R_chr07420
LT XFF4834R_chr07420
OR XFF4834R_chr from 857772 to 858881 on strand +
DE Probable formaldehyde dehydrogenase (Glutathione) FrmA
IP Alcohol dehydrogenase, zinc-containing, conserved site; Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase;
CL 1.1.5.7 Formaldehyde degradation
EC
GO InterPro
Biological Process: ethanol oxidation (GO:0006069)
Biological Process: oxidation reduction (GO:0055114)
Molecular Function: S-(hydroxymethyl)glutathione dehydrogenase activity (GO:0051903)
Molecular Function: zinc ion binding (GO:0008270)
Molecular Function: oxidoreductase activity (GO:0016491)

Curated
PM
AN also in class 1.1.5.2 for ethanbol degradation
CC COG: [C] Energy production and conversion;
CC MODEL: XFF4834R
CC STATUS: curated by darrasse (20120326)
MW 39082.7 Da
SQ 369 aa
  
........10........20........30........40........50
         |         |         |         |         |
MKSRAAVAFGPGKPLEIVEIDVAPPKAGEVLVRITHTGVCHTDAFTLSGD
DPEGIFPSVLGHEGGGIVEQVGEGVTSVKVGDHVIPLYTAECRKCKFCLS
GKTNLCQAVRATQGKGLMPDGTTRFSYNGEPIYHYMGCSTFSEYTVVPEI
SLAVVNPEAPLEKVCLLGCGVTTGIGAVHNTAKVKPGESVAVFGLGGIGL
AVIQGAVQAKAGRILAIDTNPGKFDLARSMGATDCINPKDYDKPIQEVIV
ELTDGGVDFSFECIGNVNVMRSALECCHKGWGESVIIGVAGAGQEISTRP
FQLVTGRVWRGSAFGGVKGRTQLPGMVEQSMKGEIDLDPFITHTMPLEEI
NEAFHLMHEGKSIRTVIHF

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr06610 lcl|XFF4834R_chr_0753670_0754776_f1_XFF4834R-XFF4834R_chr06610

        
1

	
369

	
S=1236 I=61 E=3.01082e-143

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr36380 lcl|XFF4834R_chr39550802_4213965_f1_XFF4834R-XFF4834R_chr36380

        
29

	
265

	
S=184 I=29 E=1.0644e-15

	
predicted oxidoreductase, Zn-dependent and NAD(P)-binding

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr10280 lcl|tdh-XFF4834R_chr10280

        
4

	
369

	
S=165 I=23 E=1.74667e-13

	
threonine 3-dehydrogenase, NAD(P)-binding

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr18010 lcl|XFF4834R_chr19230687_2062727_r2_XFF4834R-XFF4834R_chr18010

        
16

	
266

	
S=123 I=25 E=2.23979e-08

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr17360 lcl|XFF4834R_chr18520017_1987024_f2_XFF4834R-XFF4834R_chr17360

        
162

	
360

	
S=122 I=28 E=3.11957e-08

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr21310 lcl|XFF4834R_chr23210834_2474003_f3_XFF4834R-XFF4834R_chr21310

        
29

	
265

	
S=116 I=23 E=1.784e-07

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr00320 lcl|XFF4834R_chr_0036417_0037475_f3_XFF4834R-XFF4834R_chr00320

        
13

	
357

	
S=115 I=26 E=1.99811e-07

	
predicted oxidoreductase, Zn-dependent and NAD(P)-binding

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr24890 lcl|XFF4834R_chr27210568_2873569_f2_XFF4834R-XFF4834R_chr24890

        
123

	
242

	
S=99 I=31 E=2.08366e-05

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr06610 lcl|XFF4834R_chr_0753670_0754776_f1_XFF4834R-XFF4834R_chr06610

        
1

	
369

	
S=1236 I=61 E=3.01082e-143

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr36380 lcl|XFF4834R_chr39550802_4213965_f1_XFF4834R-XFF4834R_chr36380

        
29

	
265

	
S=184 I=29 E=1.0644e-15

	
predicted oxidoreductase, Zn-dependent and NAD(P)-binding

     	

   





    

        
            
                X.species
            
                
        
YP_362519.1 lcl|XCV0788

        
1

	
369

	
S=1852 I=96 E=0

	
putative alcohol dehydrogenase class III

     	

   





    

        
            
                X.species
            
                
        
NP_641087.1 lcl|XAC0734-XAC0734

        
1

	
369

	
S=1846 I=95 E=0

	
alcohol dehydrogenase C

     	

   





    

        
            
                X.species
            
                
        
NP_638735.1 lcl|XCC3389

        
1

	
369

	
S=1828 I=95 E=0

	
alcohol dehydrogenase C

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_0862

        
1

	
369

	
S=1721 I=88 E=0

	
putative alcohol dehydrogenase class III protein

     	

   





    

        
            
                X.species
            
                
        
NP_638821.1 lcl|adhC-XCC3475

        
1

	
369

	
S=1252 I=62 E=1.58687e-144

	
alcohol dehydrogenase class III

     	

   





    

        
            
                X.species
            
                
        
NP_641005.1 lcl|adhC-XAC0652

        
1

	
369

	
S=1237 I=61 E=9.63798e-143

	
alcohol dehydrogenase class III

     	

   





    

        
            
                X.species
            
                
        
YP_362444.1 lcl|XCV0713

        
1

	
369

	
S=1232 I=61 E=4.31783e-142

	
putative alcohol dehydrogenase class III

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_1049

        
4

	
369

	
S=212 I=27 E=1.45351e-18

	
putative zinc-containing alcohol dehydrogenase superfamily protein

     	

   





    

        
            
                X.species
            
                
        
YP_365597.1 lcl|XCV3866

        
29

	
265

	
S=181 I=29 E=9.70037e-15

	
Zn-dependent dehydrogenase

     	

   





    

        
            
                X.species
            
                
        
NP_644054.1 lcl|ybdR-XAC3747

        
29

	
265

	
S=175 I=29 E=4.65971e-14

	
Zn-dependent alcohol dehydrogenase

     	

   





    

        
                pubmed
        
        

        
1

	
369

	
S=1586 I=80 E=0

	
Formaldehyde dehydrogenase (Glutathione) EC=1.2.1.1 ; Metal-binding Oxidoreductase Zinc

	
Pubmed 8891129

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
369

	
S=1574 I=79 E=0

	
Glutathione-dependent formaldehyde dehydrogenase ; Metal-binding Oxidoreductase Zinc

	
Pubmed 11577159

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
369

	
S=1557 I=78 E=5.42492e-180

	
Putative alcohol dehydrogenase class III ; Metal-binding Oxidoreductase Plasmid Zinc

	
Pubmed 18070959

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
369

	
S=1557 I=78 E=5.52035e-180

	
Putative alcohol dehydrogenase ; Metal-binding Oxidoreductase Plasmid Zinc

	
Pubmed 16940067

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
369

	
S=1557 I=78 E=5.76632e-180

	
Putative alcohol dehydrogenase class III ; Metal-binding Oxidoreductase Plasmid Zinc

	
Pubmed 18070959

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
369

	
S=1537 I=77 E=1.50207e-177

	
S-(hydroxymethyl)glutathione dehydrogenase EC=1.1.1.284 EC=1.1.1.- EC=1.1.1.1 ; Cytoplasm Metal-binding NAD Oxidoreductase Plasmid Zinc

	
Pubmed 8052160

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
369

	
S=1459 I=74 E=4.75368e-168

	
Putative formaldehyde dehydrogenase (Glutathione-dependent) ; Metal-binding Oxidoreductase Zinc

	
Pubmed 9098058,10591845

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
22

	
369

	
S=1404 I=74 E=2.0643e-161

	
HI0185-like protein ; Metal-binding Oxidoreductase Zinc

	
Pubmed 16714566

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
76

	
369

	
S=1304 I=80 E=3.02562e-149

	
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase ; Plasmid

	
Pubmed 19258268

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
369

	
S=1253 I=63 E=4.57499e-143

	
Alcohol dehydrogenase class-3 EC=1.1.1.1 EC=1.1.1.284 EC=1.1.1.- ; Cytoplasm Metal-binding NAD Oxidoreductase Zinc

	
Pubmed 8863743

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
369

	
S=1570 I=79 E=0

	
S-(hydroxymethyl)glutathione dehydrogenase EC=1.1.1.284 EC=1.1.1.- EC=1.1.1.1 ; Cytoplasm Metal-binding NAD Oxidoreductase Zinc

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
369

	
S=1570 I=79 E=0

	
S-(hydroxymethyl)glutathione dehydrogenase EC=1.1.1.284 EC=1.1.1.- EC=1.1.1.1 ; Cytoplasm Metal-binding NAD Oxidoreductase Zinc

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
369

	
S=1570 I=79 E=0

	
S-(hydroxymethyl)glutathione dehydrogenase EC=1.1.1.284 EC=1.1.1.- EC=1.1.1.1 ; Cytoplasm Metal-binding NAD Oxidoreductase Zinc

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
369

	
S=1570 I=79 E=0

	
S-(hydroxymethyl)glutathione dehydrogenase EC=1.1.1.284 EC=1.1.1.- EC=1.1.1.1 ; Cytoplasm Metal-binding NAD Oxidoreductase Zinc

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
369

	
S=1570 I=79 E=0

	
S-(hydroxymethyl)glutathione dehydrogenase EC=1.1.1.284 EC=1.1.1.- EC=1.1.1.1 ; Cytoplasm Metal-binding NAD Oxidoreductase Zinc

	

    

    

         
        
prodomImg

    





    

        
            
                
            
                
        
PD842149

        
259

	
306

	
S=252 I=98 E=4.75655e-23

    	
    





    

        
            
                
            
                
        
PDA1H438

        
76

	
119

	
S=211 I=89 E=4.73673e-18

    	
    





    

        
            
                
            
                
        
PD000463

        
326

	
369

	
S=174 I=70 E=1.45374e-13

    	
    





    

        
            
                
            
                
        
PD499457

        
259

	
369

	
S=173 I=36 E=1.90488e-13

    	
    





    

        
            
                
            
                
        
PDA1G6U7

        
294

	
324

	
S=156 I=94 E=2.42753e-11

    	
    





    

        
            
                
            
                
        
PD270708

        
151

	
193

	
S=153 I=70 E=5.09352e-11

    	
    





    

        
            
                
            
                
        
PDA6T5W3

        
192

	
242

	
S=137 I=51 E=4.16105e-09

    	
    





    

        
            
                
            
                
        
PD886660

        
117

	
147

	
S=136 I=77 E=6.32347e-09

    	
    





    

        
            
                
            
                
        
PDA6N361

        
219

	
258

	
S=131 I=65 E=2.25832e-08

    	
    





    

        
            
                
            
                
        
PDA294E2

        
160

	
204

	
S=128 I=56 E=5.44781e-08

    	
    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            0 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            366 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            8 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                0 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07420.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07420.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07420.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07420.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






XFF4834R_chr07840950_0859525_f2_XFF4834R-XFF4834R_chr07430 XFF4834R_chr07430




    

         
             
            XFF4834R_chr07420
            
XFF4834R_chr07420
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr07440
            
XFF4834R_chr07440
            
        		

    





    

        ID
        XFF4834R_chr07840950_0859525_f2_XFF4834R-XFF4834R_chr07430
    

    

        AC
        XFF4834R_chr07430
    

    

        LT
        XFF4834R_chr07430
    

    

        OR
        XFF4834R_chr from 858950 to 859525 on strand +
    

   

        DE
        glutathione-dependent formaldehyde-activating enzyme
  

   

        IP
        Glutathione-dependent formaldehyde-activating, GFA
  
  
  
  

        CL
        1.1.5.7 Formaldehyde degradation 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: formaldehyde catabolic process (GO:0046294)
Biological Process: metabolic process (GO:0008152)
Molecular Function: S-(hydroxymethyl)glutathione synthase activity (GO:0051907)
Molecular Function: zinc ion binding (GO:0008270)
Molecular Function: carbon-sulfur lyase activity (GO:0016846)


            Curated

        		
    


  

        PM
        
    

  

        AN
        pathway of formaldehyde detoxification 
    

  

        CC
        COG: [S] Function unknown; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by darrasse (20120326)
  

  
  


    

        MW
        20493 Da
    


    

        SQ
        191 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MTNVSIHPSVDDGVARGGAENFQGGTLECHCANDKVTVEVSAQTAHNHAC
GCSKCWKPDGAKFSVVAVVPRDNVKVTAHQEKLKIVDESATIQRHACTGC
GVHLYGRIENKDHAFYGLDFVHTELSKQQGWSAPGFAAFVSSIIETGTPP
EQMDGVRARLTELGLPTYDCLSPALMDALSAHVARKKGLLH

    





Show or not Domain decomposition
 

    

        
            
                X.species
            
                
        
YP_362520.1 lcl|XCV0789

        
1

	
191

	
S=989 I=96 E=4.42659e-113

	
glutathione-dependent formaldehyde-activating enzyme

     	

   





    

        
            
                X.species
            
                
        
NP_641088.1 lcl|XAC0735-XAC0735

        
1

	
191

	
S=982 I=96 E=3.5258e-112

	
glutathione-dependent formaldehyde-activating enzyme

     	

   





    

        
            
                X.species
            
                
        
NP_638734.1 lcl|XCC3388

        
1

	
191

	
S=863 I=83 E=8.04793e-98

	
glutathione-dependent formaldehyde-activating enzyme

     	

   





    

        
                pubmed
        
        

        
4

	
190

	
S=664 I=64 E=4.45181e-72

	
Glutathione-dependent formaldehyde-activating enzyme EC=4.4.1.22 ; Lyase Metal-binding Plasmid Zinc

	
Pubmed 11481431

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
190

	
S=639 I=62 E=4.25124e-69

	
Glutathione-dependent formaldehyde-activating enzyme EC=4.4.1.22 ; Lyase Metal-binding Zinc

	
Pubmed 8892832,11741920

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
191

	
S=989 I=96 E=1.14722e-111

	
Glutathione-dependent formaldehyde-activating enzyme EC=4.4.1.22 ; Lyase Metal-binding Zinc

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
191

	
S=982 I=96 E=9.13767e-111

	
Glutathione-dependent formaldehyde-activating enzyme EC=4.4.1.22 ; Lyase Metal-binding Zinc

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
191

	
S=867 I=84 E=6.48441e-97

	
Glutathione-dependent formaldehyde-activating enzyme EC=4.4.1.22 ; Lyase Metal-binding Zinc

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
191

	
S=863 I=83 E=2.08575e-96

	
Glutathione-dependent formaldehyde-activating enzyme EC=4.4.1.22 ; Lyase Metal-binding Zinc

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
191

	
S=863 I=83 E=2.08575e-96

	
Glutathione-dependent formaldehyde-activating enzyme EC=4.4.1.22 ; Lyase Metal-binding Zinc

	

    

    

         
        
prodomImg

    





    

        Iprscan
        
	[G3DSA:3.90.1590.10]
	
4

	
191

	
	
-

    





    

        Iprscan
        
	[MF_00723]
	
3

	
189

	
	
-

    





    

        Iprscan
        IPR014185
	[PIRSF033318]
	
6

	
191

	
	
S-(hydroxymethyl)glutathione synthase

    





    

        Iprscan
        IPR006913
	[PF04828]
	
48

	
123

	
	
Glutathione-dependent formaldehyde-activating, GFA

    





    

        Iprscan
        IPR014185
	[TIGR02820]
	
5

	
187

	
	
S-(hydroxymethyl)glutathione synthase

    





    

        
            
                
            
                
        
PD106017

        
29

	
188

	
S=680 I=76 E=6.26477e-75

    	
    





    

        
            
                
            
                
        
PDA2T3F7

        
1

	
28

	
S=142 I=96 E=1.07353e-09

    	
    




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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            2 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            14 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                5 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07430.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07430.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07430.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07430.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






frmB XFF4834R_chr07440




    

         
             
            XFF4834R_chr07440
            
XFF4834R_chr07440
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr_0816
            
XFF4834R_chr_0816
            
        		

    





    

        ID
        frmB
    

    

        AC
        XFF4834R_chr07440
    

    

        LT
        XFF4834R_chr07440
    

    

        OR
        XFF4834R_chr from 859584 to 860414 on strand +
    

   

        DE
        probable S-formylglutathione hydrolase FrmB
  

   

        IP
        Putative esterase; S-formylglutathione hydrolase
  
  
  
  

        CL
        1.1.5.7 Formaldehyde degradation 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Cellular Component: cytoplasmic membrane-bounded vesicle (GO:0016023)
Molecular Function: carboxylesterase activity (GO:0004091)
Molecular Function: S-formylglutathione hydrolase activity (GO:0018738)


            Curated

        		
    


  

        PM
        
    

  

        AN
        according to GenProtEc
    

  

        CC
        COG: [R] General function prediction only; 
    

    

        CC
        MODEL: acur 
  
    
  

        CC
        STATUS: curated by darrasse (20120326)
  

  
  


    

        MW
        29947.3 Da
    


    

        SQ
        276 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MERIEHRACFGGWQDVYRHPSHTLNCSMQVGVYLPPQAADGPLPVLYWLS
GLTCTEQNFISKAGAQRYAAEHGVILVAPDTSPRGEDVADAGGYDIGKGA
GFYVDATQAPWAAHYRMYDYVVNELPALIEATFATTGARAISGHSMGGHG
ALTIALKNPGRYRSVSAFSPIVAPSQVPWGEKAFGQYLGNDRATWKAYDA
TALIADAQERLPLLIDQGDADEFLQNQLRTALFEDAAKAAGYPVTVRLQP
GYDHSYYFISSFIGEHIAHHAAALRG

    






    

        
            
                X.species
            
                
        
NP_641089.1 lcl|XAC0736-XAC0736

        
1

	
276

	
S=1439 I=98 E=2.43393e-167

	
esterase

     	

   





    

        
            
                X.species
            
                
        
YP_362521.1 lcl|XCV0790

        
1

	
276

	
S=1421 I=96 E=3.02166e-165

	
carboxylesterase

     	

   





    

        
            
                X.species
            
                
        
NP_638733.1 lcl|XCC3387

        
1

	
276

	
S=1360 I=92 E=9.17023e-158

	
esterase

     	

   





    

        
            
                X.species
            
                
        
 lcl|XALc_0863

        
1

	
275

	
S=1142 I=78 E=2.00129e-131

	
putative esterase protein

     	

   





    

        
                pubmed
        
        

        
1

	
274

	
S=1023 I=68 E=1.9934e-115

	
Putative esterase

	
Pubmed 15504844,15616297

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
275

	
S=932 I=62 E=1.97517e-104

	
S-formylglutathione hydrolase ; Plasmid

	
Pubmed 19258268

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
275

	
S=928 I=62 E=6.29809e-104

	
HI0184-like protein

	
Pubmed 16714566

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
275

	
S=920 I=61 E=5.71735e-103

	
S-formylglutathione hydrolase EC=3.1.2.12 ; Serine esterase

	
Pubmed 10675023

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
275

	
S=821 I=56 E=5.51421e-91

	
S-formylglutathione hydrolase EC=3.1.2.12 ; Cytoplasm Cytoplasmic vesicle Polymorphism Serine esterase

	
Pubmed 3462698,3164702

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
275

	
S=796 I=54 E=6.72179e-88

	
S-formylglutathione hydrolase EC=3.1.2.12 ; Cytoplasm Cytoplasmic vesicle Polymorphism Serine esterase

	
Pubmed 11167536

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
275

	
S=787 I=54 E=8.35189e-87

	
S-formylglutathione hydrolase EC=3.1.2.12 ; Serine esterase

	
Pubmed 11888210

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
274

	
S=732 I=52 E=3.88884e-80

	
S-formylglutathione hydrolase EC=3.1.2.12 ; Serine esterase

	
Pubmed 8892832

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
274

	
S=572 I=44 E=9.72938e-61

	
S-formylglutathione hydrolase EC=3.1.2.12 ; Cytoplasm Serine esterase

	
Pubmed 7762302

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
11

	
275

	
S=517 I=41 E=4.94294e-54

	
Formaldehyde dehydrogenase/S-formylglutathione hydrolase fusion protein

	
Pubmed 15858209

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
275

	
S=935 I=61 E=6.26509e-105

	
S-formylglutathione hydrolase frmB EC=3.1.2.12 ; Serine esterase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
275

	
S=934 I=61 E=8.57514e-105

	
S-formylglutathione hydrolase frmB EC=3.1.2.12 ; Serine esterase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
275

	
S=934 I=61 E=8.57514e-105

	
S-formylglutathione hydrolase frmB EC=3.1.2.12 ; Serine esterase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
275

	
S=931 I=61 E=2.06861e-104

	
S-formylglutathione hydrolase frmB EC=3.1.2.12 ; Serine esterase

	

    

    

         
        
prodomImg

    





    

        
                sp
        
        

        
1

	
275

	
S=931 I=61 E=2.19879e-104

	
S-formylglutathione hydrolase frmB EC=3.1.2.12 ; Serine esterase

	

    

    

         
        
prodomImg

    





    

        
            
                
            
                
        
PDA1F348

        
60

	
120

	
S=227 I=68 E=4.74541e-20

    	
    





    

        
            
                
            
                
        
PD007616

        
171

	
243

	
S=209 I=51 E=8.27722e-18

    	
    





    

        
            
                
            
                
        
PDA1O9E0

        
1

	
27

	
S=140 I=89 E=1.74029e-09

    	
    





    

        
            
                
            
                
        
PD017485

        
139

	
175

	
S=134 I=70 E=9.52777e-09

    	
    





    

        
            
                
            
                
        
PD687612

        
28

	
58

	
S=121 I=66 E=3.0621e-07

    	
    





    

        
            
                
            
                
        
PDA6T5P0

        
1

	
60

	
S=114 I=39 E=2.17763e-06

    	
    





    

        
            
                
            
                
        
PD861687

        
245

	
274

	
S=111 I=67 E=6.30866e-06

    	
    





    

        
            
                
            
                
        
PDA2Y5S2

        
1

	
59

	
S=108 I=37 E=1.26724e-05

    	
    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            16 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            36 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            1 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                0 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07440.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07440.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07440.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBZ1Elxn/XFF4834R_chr07440.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    •