5 hits
XFF4834R_chr03500 | pcaF | XFF4834R_chr03500 | predicted beta-ketoadipyl CoA thiolase |
XFF4834R_chr03510 | pcaH | XFF4834R_chr03510 | probable protocatechuate 3,4-dioxygenase beta chain |
XFF4834R_chr03520 | pcaG | XFF4834R_chr03520 | probable protocatechuate 3,4-dioxygenase alpha chain |
XFF4834R_chr03530 | pcaB | XFF4834R_chr03530 | probable 3-carboxy-cis,cis-muconate cycloisomerase protein |
XFF4834R_chr03550 | pcaC | XFF4834R_chr03550 | probable 4-carboxymuconolactone decarboxylase |
![]() XFF4834R_chr03490 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr03510 |
ID | pcaF |
AC | XFF4834R_chr03500 |
LT | XFF4834R_chr03500 |
OR | XFF4834R_chr from 402359 to 403567 on strand + |
DE | predicted beta-ketoadipyl CoA thiolase |
IP | Thiolase; Thiolase-like |
CL | 1.1.5.4 Beta-ketoadipate pathway GO:0042952 |
EC | |
GO |
InterPro Biological Process: protocatechuate catabolic process (GO:0019619) Biological Process: metabolic process (GO:0008152) Molecular Function: catalytic activity (GO:0003824) transferring acyl groups other than amino-acyl groups (GO:0016747) Curated |
PM | |
AN | according to Acinetobacter annotation |
CC | COG: [I] Lipid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by darrasse (20120316) |
MW | 41638 Da |
SQ | 402 aa |
........10........20........30........40........50 |
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XFF4834R_chr21150 lcl|XFF4834R_chr23020837_2455042_r3_XFF4834R-XFF4834R_chr21150 |
1 |
402 |
S=614 I=39 E=7.64398e-68 |
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XFF4834R_chr31520 lcl|XFF4834R_chr34100398_3622573_f2_XFF4834R-XFF4834R_chr31520 |
1 |
402 |
S=491 I=35 E=6.07039e-53 |
predicted acyltransferase |
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XFF4834R_chr01840 lcl|fadI-XFF4834R_chr01840 |
4 |
401 |
S=308 I=29 E=1.16627e-30 |
beta-ketoacyl-CoA thiolase, anaerobic, subunit |
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YP_362111.1 lcl|pcaF-XCV0380 |
1 |
402 |
S=1763 I=87 E=0 |
beta-ketoadipyl CoA thiolase |
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NP_640722.1 lcl|pcaF-XAC0366 |
1 |
402 |
S=1738 I=86 E=0 |
beta-ketoadipyl CoA thiolase |
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NP_635761.1 lcl|pcaF-XCC0366 |
1 |
402 |
S=1570 I=77 E=0 |
beta-ketoadipyl CoA thiolase |
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1 |
402 |
S=1426 I=71 E=1.3023e-165 |
probable beta-ketoadipyl coa thiolase protein |
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1 |
402 |
S=634 I=40 E=1.22311e-69 |
probable acetyl-coa c-acyltransferase protein |
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NP_642338.1 lcl|fadA-XAC2012 |
1 |
402 |
S=619 I=40 E=7.89615e-68 |
acetyl-CoA acetyltransferase |
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YP_363794.1 lcl|fadA-XCV2063 |
1 |
402 |
S=618 I=40 E=1.18955e-67 |
acetyl-CoA acetyltransferase |
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NP_637343.1 lcl|fadA-XCC1978 |
1 |
402 |
S=612 I=39 E=5.96877e-67 |
acetyl-CoA acetyltransferase |
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NP_641683.1 lcl|atoB-XAC1348 |
1 |
402 |
S=495 I=35 E=7.73016e-53 |
acetoacetyl-CoA thiolase |
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YP_363132.1 lcl|thlA-XCV1401 |
1 |
402 |
S=492 I=35 E=2.05247e-52 |
acetyl-CoA C-acetyltransferase |
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1 |
400 |
S=470 I=34 E=8.63625e-50 |
probable acetyl-coa c-acetyltransferase protein |
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NP_636671.1 lcl|atoB-XCC1297 |
1 |
402 |
S=460 I=32 E=1.63071e-48 |
acetoacetyl-CoA thiolase |
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NP_635589.1 lcl|yfcY-XCC0194 |
4 |
401 |
S=315 I=29 E=6.05007e-31 |
acetyl-CoA acetyltransferase |
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NP_640569.1 lcl|yfcY-XAC0213 |
4 |
401 |
S=308 I=29 E=3.74231e-30 |
acetyl-CoA acetyltransferase |
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YP_361929.1 lcl|XCV0198 |
4 |
401 |
S=308 I=29 E=4.26518e-30 |
acetyl-CoA acetyltransferase |
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4 |
401 |
S=307 I=29 E=5.25792e-30 |
putative acetyl-coa c-acyltransferase protein |
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3 |
402 |
S=1198 I=60 E=2.29949e-136 |
Beta-ketoadipyl-CoA thiolase EC=2.3.1.174 ; Acyltransferase Aromatic hydrocarbons catabolism |
||
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3 |
402 |
S=1166 I=59 E=1.58909e-132 |
3-ketoadipyl-CoA thiolase |
Pubmed 12399500 |
|
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1 |
402 |
S=1162 I=58 E=5.33915e-132 |
Beta-ketoadipyl-CoA thiolase EC=2.3.1.174 ; Acyltransferase Aromatic hydrocarbons catabolism |
Pubmed 7961399 |
|
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1 |
402 |
S=1157 I=58 E=2.15433e-131 |
Putative ketothiolase |
Pubmed 9495743 |
|
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1 |
401 |
S=1155 I=58 E=4.36536e-131 |
PaaE |
Pubmed 17377771 |
|
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3 |
402 |
S=1222 I=61 E=1.88152e-139 |
Beta-ketoadipyl-CoA thiolase EC=2.3.1.174 ; Acyltransferase Aromatic hydrocarbons catabolism |
||
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3 |
402 |
S=1198 I=60 E=1.57649e-136 |
Beta-ketoadipyl-CoA thiolase EC=2.3.1.174 ; Acyltransferase Aromatic hydrocarbons catabolism |
||
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1 |
402 |
S=1162 I=58 E=3.66042e-132 |
Beta-ketoadipyl-CoA thiolase EC=2.3.1.174 ; Acyltransferase Aromatic hydrocarbons catabolism |
||
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1 |
402 |
S=1148 I=56 E=2.14698e-130 |
Beta-ketoadipyl-CoA thiolase EC=2.3.1.174 ; Acyltransferase Aromatic hydrocarbons catabolism |
||
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1 |
402 |
S=1145 I=56 E=4.3127e-130 |
Beta-ketoadipyl-CoA thiolase EC=2.3.1.174 ; Acyltransferase Aromatic hydrocarbons catabolism |
||
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IPR016038 [G3DSA:3.40.47.10] | 1 |
283 |
Thiolase-like, subgroup |
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IPR002155 [PIRSF000429] | 1 |
402 |
Thiolase |
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[PTHR18919:SF8] | 66 |
402 |
- |
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IPR002155 [PTHR18919] | 66 |
402 |
Thiolase |
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IPR020616 [PF00108] | 1 |
269 |
Thiolase, N-terminal |
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IPR020617 [PF02803] | 278 |
401 |
Thiolase, C-terminal |
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IPR012793 [TIGR02430] | 2 |
402 |
Beta-ketoadipyl CoA thiolase |
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IPR002155 [TIGR01930] | 6 |
400 |
Thiolase |
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IPR020615 [PS00098] | 86 |
104 |
Thiolase, acyl-enzyme intermediate active site |
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IPR020610 [PS00099] | 383 |
396 |
Thiolase, active site |
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IPR020613 [PS00737] | 348 |
364 |
Thiolase, conserved site |
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[seg] | 183 |
201 |
- |
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[seg] | 251 |
271 |
- |
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44 |
246 |
S=189 I=28 E=1.98801e-15 |
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347 |
402 |
S=186 I=68 E=4.75412e-15 |
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79 |
400 |
S=185 I=27 E=5.96374e-15 |
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11 |
127 |
S=160 I=34 E=6.00091e-12 |
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129 |
161 |
S=148 I=73 E=1.83032e-10 |
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73 |
136 |
S=142 I=50 E=1.10293e-09 |
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296 |
348 |
S=139 I=58 E=2.29411e-09 |
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303 |
400 |
S=136 I=32 E=5.93394e-09 |
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4 |
124 |
S=134 I=36 E=9.7538e-09 |
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204 |
245 |
S=133 I=57 E=1.08296e-08 |
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IPR016039 [SSF53901] | 1 |
275 |
Thiolase-like |
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IPR016039 [SSF53901] | 277 |
402 |
Thiolase-like |
Access unfiltered results
Miscellaneous analyses
![]() XFF4834R_chr03500 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr03520 |
ID | pcaH |
AC | XFF4834R_chr03510 |
LT | XFF4834R_chr03510 |
OR | XFF4834R_chr from 403646 to 404383 on strand + |
DE | probable protocatechuate 3,4-dioxygenase beta chain |
IP | Intradiol ring-cleavage dioxygenase, C-terminal |
CL | 1.1.5.4 Beta-ketoadipate pathway GO:0042952 |
EC | |
GO |
InterPro 4-dioxygenase activity (GO:0018578) Biological Process: oxidation reduction (GO:0055114) Biological Process: protocatechuate catabolic process (GO:0019619) Biological Process: cellular aromatic compound metabolic process (GO:0006725) Molecular Function: catalytic activity (GO:0003824) Molecular Function: ferric iron binding (GO:0008199) Molecular Function: iron ion binding (GO:0005506) incorporation of two atoms of oxygen (GO:0016702) Curated |
PM | |
AN | according to Acinetobacter annotation |
CC | COG: [Q] Secondary metabolites biosynthesis, transport and catabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by darrasse (20120316) |
MW | 27249.4 Da |
SQ | 245 aa |
........10........20........30........40........50 |
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XFF4834R_chr03520 lcl|XFF4834R_chr03660388_0404948_f3_XFF4834R-XFF4834R_chr03520 |
84 |
244 |
S=233 I=37 E=6.21323e-22 |
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XFF4834R_chr03520 lcl|XFF4834R_chr03660388_0404948_f3_XFF4834R-XFF4834R_chr03520 |
84 |
244 |
S=233 I=37 E=6.21323e-22 |
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26 |
245 |
S=668 I=61 E=1.74368e-72 |
Protocatechuate 3,4-dioxygenase beta subunit |
Pubmed 12127980 |
|
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26 |
245 |
S=664 I=61 E=6.1732e-72 |
Protocatechuate 3,4-dioxygenase beta chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Metal-binding Oxidoreductase |
Pubmed 2808303 |
|
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26 |
245 |
S=650 I=60 E=3.06806e-70 |
Protocatechuate 3,4-dioxygenase beta-subunit |
Pubmed 9022300 |
|
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26 |
245 |
S=603 I=54 E=1.42976e-64 |
Protocatechuate 3,4-dioxygenase bata subunit ; Plasmid |
||
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31 |
245 |
S=601 I=53 E=2.24989e-64 |
Protocatechuate dioxygenase beta subunit EC=1.13.11.3 ; Oxidoreductase |
Pubmed 9495744 |
|
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27 |
245 |
S=597 I=51 E=7.55936e-64 |
Protocatechuate 3,4-dioxygenase beta chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Metal-binding Oxidoreductase |
||
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35 |
238 |
S=590 I=53 E=4.51563e-63 |
Protocatechuate 3,4-dioxygenase beta subunit EC=1.13.11.3 ; Oxidoreductase |
Pubmed 10742233 |
|
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27 |
245 |
S=587 I=51 E=1.16801e-62 |
Protocatechuate-3,4-dioxygenase, beta subunit EC=1.13.11.3 ; Oxidoreductase Plasmid |
Pubmed 10565539 |
|
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27 |
245 |
S=586 I=49 E=1.50403e-62 |
Protocatechuate 3,4-dioxygenase beta subunit EC=1.13.11.3 ; Oxidoreductase |
Pubmed 10049847 |
|
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27 |
245 |
S=584 I=50 E=3.02118e-62 |
B-subunit of protocatechuate 3,4-dioxygenase |
Pubmed 11390692 |
|
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26 |
245 |
S=664 I=61 E=4.25932e-72 |
Protocatechuate 3,4-dioxygenase beta chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Metal-binding Oxidoreductase |
||
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27 |
245 |
S=597 I=51 E=5.21573e-64 |
Protocatechuate 3,4-dioxygenase beta chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Metal-binding Oxidoreductase |
||
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28 |
245 |
S=550 I=49 E=2.45188e-58 |
Protocatechuate 3,4-dioxygenase beta chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Metal-binding Oxidoreductase |
||
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84 |
244 |
S=224 I=34 E=8.93108e-19 |
Protocatechuate 3,4-dioxygenase alpha chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Oxidoreductase |
||
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82 |
236 |
S=193 I=33 E=4.27944e-15 |
Catechol 1,2-dioxygenase EC=1.13.11.1 ; Aromatic hydrocarbons catabolism Iron Metal-binding Oxidoreductase |
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84 |
167 |
S=277 I=63 E=4.35869e-26 |
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178 |
244 |
S=148 I=47 E=1.69199e-10 |
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18 |
75 |
S=146 I=62 E=3.4285e-10 |
Access unfiltered results
Miscellaneous analyses
![]() XFF4834R_chr03510 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
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![]() XFF4834R_chr03530 |
ID | pcaG |
AC | XFF4834R_chr03520 |
LT | XFF4834R_chr03520 |
OR | XFF4834R_chr from 404388 to 404948 on strand + |
DE | probable protocatechuate 3,4-dioxygenase alpha chain |
IP | Intradiol ring-cleavage dioxygenase, C-terminal |
CL | 1.1.5.4 Beta-ketoadipate pathway GO:0042952 |
EC | |
GO |
InterPro 4-dioxygenase activity (GO:0018578) Biological Process: aromatic compound catabolic process (GO:0019439) Biological Process: oxidation reduction (GO:0055114) Biological Process: cellular aromatic compound metabolic process (GO:0006725) Molecular Function: catalytic activity (GO:0003824) Molecular Function: iron ion binding (GO:0005506) Molecular Function: ferric iron binding (GO:0008199) incorporation of two atoms of oxygen (GO:0016702) Curated |
PM | |
AN | according to Acinetobacter annotation |
CC | COG: [Q] Secondary metabolites biosynthesis, transport and catabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by darrasse (20120316) |
MW | 19963.3 Da |
SQ | 186 aa |
........10........20........30........40........50 |
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XFF4834R_chr03510 lcl|XFF4834R_chr03650646_0404383_f2_XFF4834R-XFF4834R_chr03510 |
34 |
184 |
S=233 I=37 E=4.24722e-22 |
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XFF4834R_chr03510 lcl|XFF4834R_chr03650646_0404383_f2_XFF4834R-XFF4834R_chr03510 |
34 |
184 |
S=233 I=37 E=4.24722e-22 |
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3 |
185 |
S=389 I=39 E=7.98888e-39 |
Protocatechuate 3,4-dioxygenase alpha-chain |
Pubmed 15066829 |
|
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3 |
185 |
S=376 I=46 E=2.97773e-37 |
Putative protocatechuate 3,4 dioxygenase alpha subunit EC=1.13.11.3 ; Oxidoreductase |
Pubmed 15006791 |
|
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3 |
185 |
S=355 I=43 E=9.07471e-35 |
Putative protocatechuate 3,4 dioxygenase alpha subunit EC=1.13.11.3 ; Oxidoreductase |
Pubmed 15006791 |
|
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2 |
185 |
S=354 I=40 E=1.30878e-34 |
Protocatechuate 3,4-dioxygenase alpha chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Oxidoreductase |
||
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3 |
185 |
S=350 I=40 E=3.41493e-34 |
Protocatechuate 3,4-dioxygenase type I alpha subunit PcaG-I |
Pubmed 11029433 |
|
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3 |
185 |
S=350 I=43 E=3.475e-34 |
Protocatechuate 3,4-dioxygenase alpha subunit |
||
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3 |
185 |
S=348 I=40 E=5.96647e-34 |
Protocatechuate 3,4-dioxygenase alpha chain EC=1.13.11.3 ; Oxidoreductase |
Pubmed 11029436 |
|
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6 |
185 |
S=344 I=43 E=2.07581e-33 |
Protocatechuate 3,4-dioxygenase alpha subunit EC=1.13.11.3 ; Oxidoreductase |
||
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3 |
185 |
S=343 I=39 E=2.51473e-33 |
Protocatechuate 3,4-dioxygenase alpha chain Putative protocatechuate 3,4 dioxygenase alpha subunit EC=1.13.11.3 ; Oxidoreductase |
Pubmed 15006791 |
|
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3 |
185 |
S=343 I=40 E=3.07313e-33 |
Putative protocatechuate 3,4 dioxygenase alpha subunit EC=1.13.11.3 ; Oxidoreductase |
Pubmed 15006791 |
|
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2 |
185 |
S=354 I=40 E=9.08383e-35 |
Protocatechuate 3,4-dioxygenase alpha chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Oxidoreductase |
||
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2 |
185 |
S=326 I=44 E=2.38497e-31 |
Protocatechuate 3,4-dioxygenase alpha chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Oxidoreductase |
||
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3 |
185 |
S=283 I=40 E=3.57796e-26 |
Protocatechuate 3,4-dioxygenase alpha chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Oxidoreductase |
||
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22 |
163 |
S=216 I=36 E=4.08618e-18 |
Protocatechuate 3,4-dioxygenase beta chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Metal-binding Oxidoreductase |
||
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34 |
184 |
S=208 I=34 E=4.65321e-17 |
Protocatechuate 3,4-dioxygenase beta chain EC=1.13.11.3 ; Aromatic hydrocarbons catabolism Iron Metal-binding Oxidoreductase |
||
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5 |
110 |
S=180 I=41 E=2.21482e-14 |
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126 |
185 |
S=111 I=43 E=5.17028e-06 |
Access unfiltered results
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Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
71 hits |
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Swiss-Prot ncbi-blastp |
10 hits |
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Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
1 hits |
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HAMAP scan |
0 hits |
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IprScan |
0 hits |
Miscellaneous analyses
![]() XFF4834R_chr03520 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr03540 |
ID | pcaB |
AC | XFF4834R_chr03530 |
LT | XFF4834R_chr03530 |
OR | XFF4834R_chr from 405131 to 406513 on strand + |
DE | probable 3-carboxy-cis,cis-muconate cycloisomerase protein |
IP | Fumarate lyase; Adenylosuccinate lyase, C-terminal; Fumarate lyase, conserved site |
CL | 1.1.5.4 Beta-ketoadipate pathway GO:0042952 |
EC | |
GO |
InterPro Biological Process: protocatechuate catabolic process (GO:0019619) Molecular Function: catalytic activity (GO:0003824) cis-muconate cycloisomerase activity (GO:0047472) Curated |
PM | |
AN | |
CC | COG: [F] Nucleotide transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by darrasse (20120316) |
MW | 48395.1 Da |
SQ | 460 aa |
........10........20........30........40........50 |
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NP_640725.1 lcl|pcaB-XAC0369 |
11 |
459 |
S=1734 I=79 E=0 |
3-carboxy-cis,cis-muconate cycloisomerase |
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YP_362114.1 lcl|pcaB-XCV0383 |
1 |
460 |
S=1689 I=78 E=0 |
3-carboxy-cis,cis-muconate cycloisomerase |
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NP_635764.1 lcl|pcaB-XCC0369 |
11 |
459 |
S=1459 I=67 E=1.57125e-169 |
3-carboxy-cis,cis-muconate cycloisomerase |
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11 |
455 |
S=1283 I=61 E=3.75711e-148 |
probable 3-carboxy-cis,cis-muconate cycloisomerase protein |
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12 |
454 |
S=879 I=45 E=1.25821e-97 |
3-carboxy-cis,cis-muconate cycloisomerase EC=5.5.1.2 ; Aromatic hydrocarbons catabolism |
Pubmed 9582432 |
|
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14 |
455 |
S=844 I=43 E=1.8244e-93 |
3-carboxy-cis,cis-muconate cycloisomerase |
Pubmed 15301541 |
|
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14 |
455 |
S=844 I=43 E=1.99061e-93 |
PcaB-like protein |
Pubmed 9642183 |
|
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14 |
433 |
S=786 I=44 E=2.31528e-86 |
3-carboxy-cis,cis-muconate cycloisomerase EC=5.5.1.2 ; Aromatic hydrocarbons catabolism Cytoplasm |
Pubmed 1390752 |
|
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15 |
454 |
S=757 I=38 E=7.42862e-83 |
3-carboxy-cis,cis-muconate cycloisomerase EC=5.5.1.2 ; Aromatic hydrocarbons catabolism |
Pubmed 8063101 |
|
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15 |
401 |
S=615 I=37 E=1.21439e-65 |
3-carboxy-cis,cis-muconate lactonizing enzyme EC=5.5.1.2 ; Isomerase |
Pubmed 17074892 |
|
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11 |
456 |
S=584 I=35 E=5.61949e-62 |
3-carboxy-cis,cis-muconate cycloisomerase homologue |
Pubmed 16452404 |
|
![]() |
16 |
388 |
S=552 I=39 E=5.50393e-58 |
3-carboxy-cis,cis-muconate cycloisomerase homolog EC=5.5.1.2 |
Pubmed 9495744 |
|
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15 |
455 |
S=545 I=35 E=3.23097e-57 |
Putative carboxymuconate cycloisomerase |
Pubmed 17103476 |
|
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89 |
401 |
S=520 I=39 E=3.70535e-54 |
3-carboxy-cis,cis-muconate lactonizing enzyme EC=5.5.1.2 ; Isomerase |
Pubmed 17074892 |
|
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12 |
454 |
S=879 I=45 E=8.65912e-98 |
3-carboxy-cis,cis-muconate cycloisomerase EC=5.5.1.2 ; Aromatic hydrocarbons catabolism |
||
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15 |
455 |
S=849 I=46 E=3.05794e-94 |
3-carboxy-cis,cis-muconate cycloisomerase EC=5.5.1.2 ; Aromatic hydrocarbons catabolism Cytoplasm |
||
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14 |
433 |
S=786 I=44 E=1.5934e-86 |
3-carboxy-cis,cis-muconate cycloisomerase EC=5.5.1.2 ; Aromatic hydrocarbons catabolism Cytoplasm |
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15 |
454 |
S=757 I=38 E=5.11246e-83 |
3-carboxy-cis,cis-muconate cycloisomerase EC=5.5.1.2 ; Aromatic hydrocarbons catabolism |
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15 |
454 |
S=722 I=36 E=7.8112e-79 |
Uncharacterized protein C8E4.05c ; Cytoplasm Nucleus |
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111 |
400 |
S=249 I=31 E=1.19661e-22 |
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416 |
460 |
S=211 I=96 E=5.53257e-18 |
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47 |
110 |
S=159 I=55 E=9.0486e-12 |
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11 |
46 |
S=143 I=81 E=7.92608e-10 |
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15 |
102 |
S=138 I=36 E=3.64499e-09 |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
29 hits |
![]() |
Swiss-Prot ncbi-blastp |
54 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
1 hits |
![]() |
HAMAP scan |
0 hits |
![]() |
IprScan |
0 hits |
Miscellaneous analyses
![]() XFF4834R_chr03540 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr03560 |
ID | pcaC |
AC | XFF4834R_chr03550 |
LT | XFF4834R_chr03550 |
OR | XFF4834R_chr from 407333 to 407746 on strand + |
DE | probable 4-carboxymuconolactone decarboxylase |
IP | Carboxymuconolactone decarboxylase |
CL | 1.1.5.4 Beta-ketoadipate pathway GO:0042952 |
EC | |
GO |
InterPro Curated |
PM | |
AN | |
CC | COG: [S] Function unknown; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by darrasse (20120319) |
MW | 15019.9 Da |
SQ | 137 aa |
........10........20........30........40........50 |
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NP_640727.1 lcl|pcaC-XAC0371 |
1 |
137 |
S=703 I=98 E=1.27241e-78 |
4-carboxymuconolactone decarboxylase |
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YP_362116.1 lcl|pcaC-XCV0385 |
1 |
136 |
S=627 I=93 E=1.91918e-69 |
4-carboxymuconolactone decarboxylase |
![]() |
NP_635766.1 lcl|pcaC-XCC0371 |
1 |
132 |
S=575 I=83 E=3.51556e-63 |
4-carboxymuconolactone decarboxylase |
![]() |
1 |
127 |
S=481 I=78 E=9.32996e-52 |
probable 4-carboxymuconolactone decarboxylase protein |
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[G3DSA:1.20.1290.10] | 19 |
137 |
- |
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IPR003779 [PF02627] | 36 |
118 |
Carboxymuconolactone decarboxylase |
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IPR012788 [TIGR02425] | 3 |
125 |
4-carboxymuconolactone decarboxylase |
![]() |
[SSF69118] | 6 |
123 |
- |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
24 hits |
![]() |
Swiss-Prot ncbi-blastp |
3 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
0 hits |
![]() |
HAMAP scan |
0 hits |
![]() |
IprScan |
4 hits |
Miscellaneous analyses