Xanthomonas fuscans subsp. fuscans

3 hits

  1. XFF4834R_chr01840fadIXFF4834R_chr01840probable beta-ketoacyl-CoA thiolase
  2. XFF4834R_chr15840fadEXFF4834R_chr15840probable acyl coenzyme A dehydrogenase
  3. XFF4834R_chr21150fadAXFF4834R_chr21150probable acetyl-CoA acetyltransferase

fadI XFF4834R_chr01840
XFF4834R_chr01830
XFF4834R_chr01830 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Framed OrthoMCL XFF4834R_chr01850
XFF4834R_chr01850
ID fadI
AC XFF4834R_chr01840
LT XFF4834R_chr01840
OR XFF4834R_chr from 220546 to 221841 on strand +
DE probable beta-ketoacyl-CoA thiolase
IP Thiolase; Thiolase-like
CL 1.1.2.4 Anaerobic fatty acid oxidation pathway
EC
GO InterPro
Biological Process: metabolic process (GO:0008152)
Molecular Function: catalytic activity (GO:0003824)
transferring acyl groups other than amino-acyl groups (GO:0016747)

Curated
PM
AN changement de start +5 aa(aligner sur autres xanth). PMID: 12535077 , publi de genprotec 39% d'homology avec fadI coli sur 96%, le nom chez xac et xcc : yfcY (ancien nom de fadI)
CC COG: [I] Lipid transport and metabolism;
CC MODEL: XFF4834R
CC STATUS: curated by brin (20100909)
MW 45559.6 Da
SQ 431 aa
  
........10........20........30........40........50
         |         |         |         |         |
MPGQPMPAARPVAILGGVRIPFCRQNTAYADVGNLGMSVRTLGALVERFG
LHGQQLGEVAMGAVIKHSADWNLAREAALSSGLSPLTPGITLQRACGTSL
DSVITIANKIALGQIDSGIGGGSDTTSEVPIVYGKKLRARLLAANRAKAT
GDKLRALLRGFKLAELKPEFPGVAEPRTGKSMGDHCEDMAKEWNISRDSQ
DEWAVASHHKLAAAYERGFFDALIAPFRGVSRDNILRADTSLEKLATLRP
AFDKTSGRGTLTAANSTPLTDGAAAVLLSSEAWALAHGHTPMAYLRDAQV
AAVDFVHGEGLLMAPTIAVPQMLARQGLTLQDFDIYEIHEAFAAQVLCTL
RAWESEDYCRNRLGLDAPLGRIDPDKINPLGSSLATGHPFAATGARVVAT
AAKQLEERGGGRALISICTAGGMGVVAIVER

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr21150 XFF4834R_chr23020837_2455042_r3_XFF4834R-XFF4834R_chr21150

        
182

	
430

	
S=334 I=36 E=8.45573e-34

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr03500 paaJ-XFF4834R_chr03500

        
12

	
431

	
S=301 I=30 E=7.14096e-30

	
predicted beta-ketoadipyl CoA thiolase

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr31520 XFF4834R_chr34100398_3622573_f2_XFF4834R-XFF4834R_chr31520

        
172

	
430

	
S=243 I=30 E=8.02101e-23

	
predicted acyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_640569.1 yfcY-XAC0213

        
1

	
431

	
S=2036 I=91 E=0

	
acetyl-CoA acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_361929.1 XCV0198

        
1

	
431

	
S=2032 I=90 E=0

	
acetyl-CoA acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635589.1 yfcY-XCC0194

        
1

	
431

	
S=1997 I=88 E=0

	
acetyl-CoA acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
XALc_3086 XALc_3086

        
3

	
431

	
S=1813 I=80 E=0

	
putative acetyl-coa c-acyltransferase protein

     	

   





    

        
            
                XFF4834R
            
                
        
YP_363794.1 fadA-XCV2063

        
182

	
430

	
S=332 I=36 E=5.27433e-33

	
acetyl-CoA acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_637343.1 fadA-XCC1978

        
182

	
430

	
S=332 I=36 E=5.46152e-33

	
acetyl-CoA acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_642338.1 fadA-XAC2012

        
182

	
430

	
S=331 I=35 E=7.74058e-33

	
acetyl-CoA acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
XALc_3031 pcaF-XALc_3031

        
14

	
431

	
S=330 I=32 E=8.97726e-33

	
probable beta-ketoadipyl coa thiolase protein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635761.1 pcaF-XCC0366

        
12

	
431

	
S=323 I=30 E=6.78599e-32

	
beta-ketoadipyl CoA thiolase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_640722.1 pcaF-XAC0366

        
12

	
431

	
S=309 I=30 E=3.43195e-30

	
beta-ketoadipyl CoA thiolase

     	

   





    

        
            
                XFF4834R
            
                
        
XALc_1595 fadA-XALc_1595

        
182

	
430

	
S=305 I=34 E=1.05682e-29

	
probable acetyl-coa c-acyltransferase protein

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362111.1 pcaF-XCV0380

        
12

	
431

	
S=293 I=30 E=2.52515e-28

	
beta-ketoadipyl CoA thiolase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_363132.1 thlA-XCV1401

        
172

	
430

	
S=252 I=31 E=2.60387e-23

	
acetyl-CoA C-acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
XALc_2525 atoB-XALc_2525

        
172

	
430

	
S=251 I=31 E=3.12706e-23

	
probable acetyl-coa c-acetyltransferase protein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_641683.1 atoB-XAC1348

        
172

	
430

	
S=250 I=31 E=3.95706e-23

	
acetoacetyl-CoA thiolase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_636671.1 atoB-XCC1297

        
172

	
430

	
S=244 I=30 E=2.38447e-22

	
acetoacetyl-CoA thiolase

     	

   





    

        
                pubmed
        
        

        
10

	
430

	
S=1015 I=53 E=4.43654e-114

	
PROBABLE ACETYL-CoA ACYLTRANSFERASE FADA2 (3-KETOACYL-CoA THIOLASE) (BETA-KETOTHIOLASE) EC=2.3.1.16 Thiolase EC=2.3.1.16

	
Pubmed 19099550

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
12

	
430

	
S=633 I=36 E=7.92871e-68

	
Uncharacterized protein B0303.3 ; Acyltransferase

	
Pubmed 1538779

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
430

	
S=612 I=36 E=2.52396e-65

	
Trifunctional enzyme subunit beta, mitochondrial EC=2.3.1.16 ; Acetylation Acyltransferase Fatty acid metabolism Lipid Mitochondrion Transit pept

	
Pubmed 8253773

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
431

	
S=608 I=34 E=9.17245e-65

	
Thiolase ; Acyltransferase

	
Pubmed 10191082

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
422

	
S=607 I=34 E=1.09198e-64

	
Mitochondrial trifunctional protein, beta subunit

	
Pubmed 12140684

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|A1RI91|FADI_SHESW

        
12

	
430

	
S=684 I=38 E=3.15724e-74

	
3-ketoacyl-CoA thiolase EC=2.3.1.16 ; Acyltransferase Cytoplasm Fatty acid metabolism Lipid degradation

    





    

        
            
                sp_Pdown
            
        
        
sp|A9KTW7|FADI_SHEB9

        
12

	
430

	
S=674 I=37 E=5.65771e-73

	
3-ketoacyl-CoA thiolase EC=2.3.1.16 ; Acyltransferase Cytoplasm Fatty acid metabolism Lipid degradation

    





    

        
            
                sp_Pdown
            
        
        
sp|A3D685|FADI_SHEB5

        
12

	
430

	
S=674 I=37 E=5.65771e-73

	
3-ketoacyl-CoA thiolase EC=2.3.1.16 ; Acyltransferase Cytoplasm Fatty acid metabolism Lipid degradation

    





    

        
            
                sp_Pdown
            
        
        
sp|B8EE97|FADI_SHEB2

        
12

	
430

	
S=674 I=37 E=5.65771e-73

	
3-ketoacyl-CoA thiolase EC=2.3.1.16 ; Acyltransferase Cytoplasm Fatty acid metabolism Lipid degradation

    





    

        
            
                sp_Pdown
            
        
        
sp|A4Y898|FADI_SHEPC

        
12

	
430

	
S=671 I=37 E=1.45072e-72

	
3-ketoacyl-CoA thiolase EC=2.3.1.16 ; Acyltransferase Cytoplasm Fatty acid metabolism Lipid degradation

    





    

        Iprscan
        IPR016038
	[G3DSA:3.40.47.10]
	
8

	
295

	
	
Thiolase-like, subgroup

    





    

        Iprscan
        IPR002155
	[PIRSF000429]
	
9

	
431

	
	
Thiolase

    





    

        Iprscan
        
	[PTHR18919:SF5]
	
72

	
431

	
	
-

    





    

        Iprscan
        IPR002155
	[PTHR18919]
	
72

	
431

	
	
Thiolase

    





    

        Iprscan
        IPR020617
	[PF02803]
	
290

	
431

	
	
Thiolase, C-terminal

    





    

        Iprscan
        IPR020616
	[PF00108]
	
11

	
281

	
	
Thiolase, N-terminal

    





    

        Iprscan
        IPR002155
	[TIGR01930]
	
14

	
430

	
	
Thiolase

    





    

        
            
                
            
                
        
PD721696

        
6

	
87

	
S=216 I=56 E=1.17042e-18

    	
    





    

        
            
                
            
                
        
PDA5L2P0

        
170

	
280

	
S=167 I=36 E=1.06733e-12

    	
    





    

        
            
                
            
                
        
PDA1U529

        
355

	
380

	
S=148 I=100 E=2.17805e-10

    	
    





    

        
            
                
            
                
        
PD859032

        
313

	
378

	
S=140 I=44 E=2.01199e-09

    	
    





    

        
            
                
            
                
        
PD032470

        
211

	
257

	
S=125 I=50 E=1.222e-07

    	
    





    

        
            
                
            
                
        
PDA1U6C2

        
150

	
175

	
S=123 I=92 E=1.85705e-07

    	
    





    

        
            
                
            
                
        
PDA8Z0A6

        
188

	
253

	
S=118 I=38 E=8.1048e-07

    	
    





    

        
            
                
            
                
        
PDA264K2

        
161

	
257

	
S=112 I=35 E=4.55481e-06

    	
    





    

        
            
                
            
                
        
PDA1L9N0

        
352

	
378

	
S=110 I=70 E=8.68303e-06

    	
    





    

        
            
                
            
                
        
PDA6U1F2

        
346

	
378

	
S=108 I=64 E=1.28548e-05

    	
    





    

        Iprscan
        IPR016039
	[SSF53901]
	
288

	
431

	
	
Thiolase-like

    





    

        Iprscan
        IPR016039
	[SSF53901]
	
11

	
288

	
	
Thiolase-like

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            209 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            286 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            4 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                9 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr01840.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr01840.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr01840.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr01840.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






fadE XFF4834R_chr15840




    

         
             
            XFF4834R_chr15830
            
XFF4834R_chr15830
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr15850
            
XFF4834R_chr15850
            
        		

    





    

        ID
        fadE
    

    

        AC
        XFF4834R_chr15840
    

    

        LT
        XFF4834R_chr15840
    

    

        OR
        XFF4834R_chr from 1828430 to 1830904 on strand -
    

   

        DE
        probable acyl coenzyme A dehydrogenase
  

   

        IP
        Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal; Acyl-CoA dehydrogenase/oxidase, N-terminal; Pimeloyl-CoA dehydrogenase, small subunit
  
  
  
  

        CL
        1.1.2.4 Anaerobic fatty acid oxidation pathway 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: fatty acid beta-oxidation using acyl-CoA dehydrogenase (GO:0033539)
Biological Process: metabolic process (GO:0008152)
Biological Process: oxidation reduction (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995)
Molecular Function: FAD binding (GO:0050660)
acting on the CH-CH group of donors (GO:0016627)


            Curated

        		
    


  

        PM
        
    

  

        AN
        chez genprotec fadE et fadF sont synonymes j ai garde E pour etre comme autres xantho
    

  

        CC
        COG: [I] Lipid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by brin (20100810)
  

  
  


    

        MW
        89447 Da
    


    

        SQ
        824 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MSIIAPFLLVVLAAGIAAYHRMRLATWVAISACVLVACWLLGANLTATIV
AAALVVLISAPVLLPFLRKPLLTTPLMGFFRKVLPPLSQTERIALETGSV
GFEGELFTGDPDWQKLLNYPKPQLTAEEQAFLDGPVEELCKMINDWEITH
VHADLPPELWDFIKKNKFFGMIIPKQYGGLGFSALAHHKVIQKLSSISSV
VSSTVGVPNSLGPGELLLHYGTPEQKDYYLPRLAVGAEVPCFGLTGPFAG
SDATSIPDYGIVCKGEWNGANVLGVKLTFDKRYITLAPVASLIGLAFRAY
DPDGLIGDKKDIGITLALLPRETPGVEIGRRHFPLNSPFQNGPIHGEEVF
IPLSQLIGGVEMVGKGWNMLNECLAVGRSITLPSTASGGSKAAAVVTGAY
ARIRKQFGLSVGRFEGVEEALARIGGKAYAISALSQATAAAVDRGDVPSV
PSAIAKYHCTTMGREVVSDMMDVIGGKGIILGPRNFAGRAWQAAPIGVTV
EGANIMTRSLLIFGQGAILCHPWVLKEMQAAQDPDTRRGLEQFDQSLFGH
IRFGISNAVRSFWFGLTGARLGAAPGDAYTRRFFRKLDRYSANLALMADV
SMLMLGGKLKFKESLSGRLGDVLSHIYMTSAILKRYHDEGAPASDQPLLA
WAFHDSVHKIETALSAALRNFPIRPVGWLMWVLIFPLGRRAEAPGDRLGH
RVASLLMTPNEARDRLAKGVFLTPCANNPGGRIASYLTKAVMAEPVERKF
LKALKTKGIEALDFPAQLDEAVAEGVISMEERKLLEELREIMMDTITVDD
FDPHELRAASFYDKPQMQQPREAA

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr29520 lcl|XFF4834R_chr_3391021_3392217_r1_XFF4834R-XFF4834R_chr29520

        
154

	
478

	
S=160 I=24 E=1.74715e-12

	
predicted acyl-CoA dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr02380 lcl|caiA-XFF4834R_chr02380

        
155

	
511

	
S=118 I=23 E=2.57579e-07

	
crotonobetaine reductase subunit II, FAD-binding

     	

   





    

        
            
                XFF4834R
            
                
        
NP_643363.1 lcl|fadE-XAC3054

        
1

	
824

	
S=3983 I=92 E=0

	
acyl-CoA dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_364921.1 lcl|fadE-XCV3190

        
1

	
824

	
S=3960 I=92 E=0

	
acyl-CoA dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_638218.1 lcl|fadE-XCC2870

        
1

	
824

	
S=3893 I=90 E=0

	
acyl-CoA dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_2197

        
1

	
824

	
S=3489 I=80 E=0

	
putative acyl-coa dehydrogenase protein

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_1764

        
154

	
478

	
S=162 I=24 E=3.80674e-12

	
putative acyl-coa dehydrogenase oxidoreductase protein

     	

   





    

        
            
                XFF4834R
            
                
        
YP_363336.1 lcl|acdA-XCV1605

        
154

	
478

	
S=159 I=24 E=1.00197e-11

	
acyl-CoA dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_641895.1 lcl|acdA-XAC1562

        
154

	
478

	
S=159 I=24 E=1.00197e-11

	
acyl-CoA dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_636886.1 lcl|acdA-XCC1514

        
154

	
478

	
S=159 I=24 E=1.03753e-11

	
acyl-CoA dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_0151

        
155

	
511

	
S=155 I=23 E=3.33728e-11

	
putative acyl-coa dehydrogenase protein

     	

   





    

        
            
                XFF4834R
            
                
        
YP_363095.1 lcl|XCV1364

        
216

	
480

	
S=149 I=25 E=1.4189e-10

	
acyl-CoA dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_641648.1 lcl|fadE9-XAC1313

        
216

	
480

	
S=147 I=25 E=2.50078e-10

	
acyl-CoA dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635641.1 lcl|acdA-XCC0246

        
155

	
511

	
S=142 I=24 E=1.12035e-09

	
acyl-CoA dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362004.1 lcl|acdA-XCV0273

        
155

	
511

	
S=121 I=23 E=4.32053e-07

	
acyl-CoA dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_640621.1 lcl|acdA-XAC0265

        
155

	
511

	
S=114 I=23 E=3.12661e-06

	
acyl-CoA dehydrogenase

     	

   





    

        
                pubmed
        
        

        
67

	
824

	
S=2060 I=52 E=0

	
Acyl-coenzyme A dehydrogenase EC=1.3.99.- ; FAD Fatty acid metabolism Flavoprotein Lipid Oxidoreductase

	
Pubmed 10206693

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
67

	
743

	
S=2011 I=55 E=0

	
Acyl-CoA dehydrogenase

	
Pubmed 12057976

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
716

	
S=1785 I=50 E=0

	
Very-long-chain acyl-coA dehydrogenase homolog

	
Pubmed 11207749,11872725

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
296

	
399

	
S=327 I=58 E=2.16293e-30

	
Putative uroporphyrinogen-III C-methyltransferase EC=2.1.1.107 ; Cell inner membrane biosynthesis S-adenosyl-L-methionine Transmembrane

	
Pubmed 8874804

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
102

	
508

	
S=265 I=27 E=6.45066e-23

	
Acyl-CoA dehydrogenase family member 9, mitochondrial EC=1.3.99.- ; Acetylation FAD Flavoprotein Mitochondrion Oxidoreductase Polymorphism T

	
Pubmed 12359260

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8ZBY6|FADE_YERPE

        
67

	
824

	
S=2094 I=53 E=0

	
Acyl-coenzyme A dehydrogenase EC=1.3.99.- ; FAD Fatty acid metabolism Flavoprotein Lipid Oxidoreductase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8X7R2|FADE_ECO57

        
67

	
824

	
S=2074 I=53 E=0

	
Acyl-coenzyme A dehydrogenase EC=1.3.99.- ; FAD Fatty acid metabolism Flavoprotein Lipid Oxidoreductase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q47146|FADE_ECOLI

        
67

	
824

	
S=2074 I=52 E=0

	
Acyl-coenzyme A dehydrogenase EC=1.3.99.- ; FAD Fatty acid metabolism Flavoprotein Lipid Oxidoreductase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8ZRJ7|FADE_SALTY

        
67

	
824

	
S=2060 I=52 E=0

	
Acyl-coenzyme A dehydrogenase EC=1.3.99.- ; FAD Fatty acid metabolism Flavoprotein Lipid Oxidoreductase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8Z937|FADE_SALTI

        
67

	
824

	
S=2056 I=52 E=0

	
Acyl-coenzyme A dehydrogenase EC=1.3.99.- ; FAD Fatty acid metabolism Flavoprotein Lipid Oxidoreductase

    





    

        Iprscan
        IPR013786
	[G3DSA:1.10.540.10]
	
124

	
239

	
	
Acyl-CoA dehydrogenase/oxidase, N-terminal

    





    

        Iprscan
        IPR006091
	[G3DSA:2.40.110.10]
	
240

	
358

	
	
Acyl-CoA oxidase/dehydrogenase, central domain

    





    

        Iprscan
        IPR013764
	[G3DSA:1.20.140.10]
	
363

	
511

	
	
Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal

    





    

        Iprscan
        
	[PTHR10909:SF10]
	
194

	
706

	
	
-

    





    

        Iprscan
        
	[PTHR10909]
	
194

	
706

	
	
-

    





    

        Iprscan
        IPR015396
	[PF09317]
	
518

	
801

	
	
Protein of unknown function DUF1974

    





    

        Iprscan
        IPR006090
	[PF00441]
	
364

	
509

	
	
Acyl-CoA oxidase/dehydrogenase, type 1

    





    

        Iprscan
        IPR006092
	[PF02771]
	
137

	
236

	
	
Acyl-CoA dehydrogenase, N-terminal

    





    

        Iprscan
        
	[seg]
	
45

	
65

	
	
-

    





    

        Iprscan
        
	[seg]
	
195

	
210

	
	
-

    





    

        Iprscan
        
	[seg]
	
428

	
441

	
	
-

    





    

        Iprscan
        
	[seg]
	
780

	
790

	
	
-

    





    

        Iprscan
        
	[SignalP-NN(euk)]
	
1

	
18

	
	
-

    





    

        Iprscan
        
	[tmhmm]
	
2

	
19

	
	
-

    





    

        Iprscan
        
	[tmhmm]
	
24

	
43

	
	
-

    





    

        Iprscan
        
	[tmhmm]
	
45

	
67

	
	
-

    





    

        
            
                
            
                
        
PD703961

        
513

	
674

	
S=547 I=60 E=1.26116e-58

    	
    





    

        
            
                
            
                
        
PD707090

        
263

	
372

	
S=437 I=71 E=2.61762e-45

    	
    





    

        
            
                
            
                
        
PD597950

        
1

	
79

	
S=276 I=71 E=7.27127e-26

    	
    





    

        
            
                
            
                
        
PD878467

        
442

	
512

	
S=266 I=65 E=1.33753e-24

    	
    





    

        
            
                
            
                
        
PD705789

        
373

	
427

	
S=195 I=67 E=5.45526e-16

    	
    





    

        
            
                
            
                
        
PD032527

        
80

	
125

	
S=190 I=74 E=2.12574e-15

    	
    





    

        
            
                
            
                
        
PDA4B900

        
791

	
824

	
S=183 I=97 E=1.38551e-14

    	
    





    

        
            
                
            
                
        
PDA1F9V6

        
123

	
160

	
S=168 I=79 E=8.26951e-13

    	
    





    

        
            
                
            
                
        
PD000558

        
157

	
330

	
S=159 I=33 E=1.00973e-11

    	
    





    

        
            
                
            
                
        
PD042730

        
713

	
815

	
S=148 I=35 E=2.54222e-10

    	
    





    

        Iprscan
        IPR009100
	[SSF56645]
	
115

	
360

	
	
Acyl-CoA dehydrogenase/oxidase

    





    

        Iprscan
        IPR009075
	[SSF47203]
	
364

	
522

	
	
Acyl-CoA dehydrogenase/oxidase C-terminal

    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            70 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            94 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            2 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                18 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr15840.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr15840.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr15840.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr15840.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






fadA XFF4834R_chr21150




    

         
             
            XFF4834R_chr21140
            
XFF4834R_chr21140
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr21160
            
XFF4834R_chr21160
            
        		

    





    

        ID
        fadA
    

    

        AC
        XFF4834R_chr21150
    

    

        LT
        XFF4834R_chr21150
    

    

        OR
        XFF4834R_chr from 2453837 to 2455042 on strand -
    

   

        DE
        probable acetyl-CoA acetyltransferase
  

   

        IP
        Thiolase; Thiolase-like
  
  
  
  

        CL
        1.1.2.4 Anaerobic fatty acid oxidation pathway 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: metabolic process (GO:0008152)
Molecular Function: catalytic activity (GO:0003824)
transferring acyl groups other than amino-acyl groups (GO:0016747)


            Curated

        		
    


  

        PM
        
    

  

        AN
        ancien nom ds certaines publi YsiA
    

  

        CC
        COG: [I] Lipid transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by brin (20100812)
  

  
  


    

        MW
        41912.8 Da
    


    

        SQ
        401 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MSKQIQEAYIVAATRTPVGKAPKGVFRNTRPDDMLAHVLRAVVAQAPGID
TSRIDDAIIGCAMPEGEQGMNVARIGVLLAGLPNSVAGQTINRFCSSGIQ
AIAMAADQIRLGNADLMLAGGTESMSMVPMMGNKVAMAPSVFADDHVAIA
YGMGITAEKVAEEWKVSREDQDAFALASHQKAIAAIAAGEFRDEISPYEI
HSHQPDLAGNVIALRKRLVDTDEGPRPDSSLEGLAKLRPVFRNGQFGGSV
TAGNSSQMSDGAGAVLLASEQAIKDYGLTPLARFVSFSVAGVRPEVMGIG
PIAAIPKALKQAGLTKDQLDWIELNEAFAAQALAVIRDSELDPSKVNPLG
GAIALGHPLGATGAIRAATLVHGLRRRQQKYGMVTMCIGTGMGAAGIIEA
L

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr03500 lcl|paaJ-XFF4834R_chr03500

        
5

	
401

	
S=695 I=45 E=1.19879e-77

	
predicted beta-ketoadipyl CoA thiolase

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr31520 lcl|XFF4834R_chr34100398_3622573_f2_XFF4834R-XFF4834R_chr31520

        
5

	
399

	
S=518 I=38 E=3.69114e-56

	
predicted acyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr01840 lcl|fadI-XFF4834R_chr01840

        
71

	
399

	
S=344 I=33 E=3.95739e-35

	
beta-ketoacyl-CoA thiolase, anaerobic, subunit

     	

   





    

        
            
                XFF4834R
            
                
        
YP_363794.1 lcl|fadA-XCV2063

        
1

	
401

	
S=2053 I=98 E=0

	
acetyl-CoA acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_642338.1 lcl|fadA-XAC2012

        
1

	
401

	
S=2047 I=97 E=0

	
acetyl-CoA acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_637343.1 lcl|fadA-XCC1978

        
1

	
401

	
S=2042 I=97 E=0

	
acetyl-CoA acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|fadA-XALc_1595

        
1

	
401

	
S=1895 I=90 E=0

	
probable acetyl-coa c-acyltransferase protein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635761.1 lcl|pcaF-XCC0366

        
5

	
399

	
S=738 I=45 E=3.16068e-82

	
beta-ketoadipyl CoA thiolase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_640722.1 lcl|pcaF-XAC0366

        
5

	
401

	
S=684 I=44 E=9.43419e-76

	
beta-ketoadipyl CoA thiolase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|pcaF-XALc_3031

        
5

	
401

	
S=683 I=43 E=1.30258e-75

	
probable beta-ketoadipyl coa thiolase protein

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362111.1 lcl|pcaF-XCV0380

        
5

	
401

	
S=683 I=44 E=1.43369e-75

	
beta-ketoadipyl CoA thiolase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|atoB-XALc_2525

        
5

	
399

	
S=530 I=37 E=4.95662e-57

	
probable acetyl-coa c-acetyltransferase protein

     	

   





    

        
            
                XFF4834R
            
                
        
YP_363132.1 lcl|thlA-XCV1401

        
5

	
401

	
S=528 I=38 E=8.36326e-57

	
acetyl-CoA C-acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_641683.1 lcl|atoB-XAC1348

        
5

	
399

	
S=527 I=38 E=9.95647e-57

	
acetoacetyl-CoA thiolase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_636671.1 lcl|atoB-XCC1297

        
5

	
399

	
S=511 I=37 E=1.01147e-54

	
acetoacetyl-CoA thiolase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|XALc_3086

        
153

	
399

	
S=356 I=36 E=6.78354e-36

	
putative acetyl-coa c-acyltransferase protein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_640569.1 lcl|yfcY-XAC0213

        
71

	
399

	
S=345 I=33 E=1.45984e-34

	
acetyl-CoA acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_361929.1 lcl|XCV0198

        
71

	
399

	
S=344 I=32 E=1.91288e-34

	
acetyl-CoA acetyltransferase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635589.1 lcl|yfcY-XCC0194

        
48

	
399

	
S=343 I=30 E=2.52846e-34

	
acetyl-CoA acetyltransferase

     	

   





    

        
                pubmed
        
        

        
5

	
399

	
S=957 I=50 E=3.34085e-107

	
Acetyl-CoA acethyltransferase homologue Acetyl-CoA acetyltransferase homologue

	
Pubmed 15901693

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
399

	
S=954 I=50 E=8.27283e-107

	
Acetyl-CoA acetyltransferase homologue

	
Pubmed 15901693

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
399

	
S=952 I=50 E=1.42042e-106

	
Acetyl-CoA acethyltransferase homologue

	
Pubmed 19001453

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
399

	
S=950 I=50 E=3.0328e-106

	
Acetyl-CoA acetyltransferase homologue

	
Pubmed 15901693

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
399

	
S=948 I=50 E=4.81424e-106

	
Acetyl-CoA acethyltransferase homologue

	
Pubmed 19001453

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|O32177|FADA_BACSU

        
5

	
399

	
S=940 I=51 E=3.41495e-105

	
3-ketoacyl-CoA thiolase EC=2.3.1.16 ; Acyltransferase Fatty acid metabolism Lipid degradation

    





    

        
            
                sp_Pdown
            
        
        
sp|B6EGU1|FADA_ALISL

        
5

	
399

	
S=794 I=45 E=1.30055e-87

	
3-ketoacyl-CoA thiolase EC=2.3.1.16 ; Acyltransferase Cytoplasm Fatty acid metabolism Lipid degradation

    





    

        
            
                sp_Pdown
            
        
        
sp|P21775|THIKA_RAT

        
7

	
399

	
S=790 I=46 E=4.5644e-87

	
3-ketoacyl-CoA thiolase A, peroxisomal EC=2.3.1.16 ; Acyltransferase Alternative splicing Fatty acid metabolism Lipid Peroxisome Transit peptide

    





    

        
            
                sp_Pdown
            
        
        
sp|Q921H8|THIKA_MOUSE

        
7

	
399

	
S=787 I=46 E=9.32991e-87

	
3-ketoacyl-CoA thiolase A, peroxisomal EC=2.3.1.16 ; Acyltransferase Fatty acid metabolism Lipid Peroxisome Transit peptide

    





    

        
            
                sp_Pdown
            
        
        
sp|P07871|THIKB_RAT

        
7

	
399

	
S=786 I=46 E=1.41785e-86

	
3-ketoacyl-CoA thiolase B, peroxisomal EC=2.3.1.16 ; Acyltransferase Fatty acid metabolism Lipid Peroxisome Transit peptide

    





    

        Iprscan
        IPR016038
	[G3DSA:3.40.47.10]
	
6

	
284

	
	
Thiolase-like, subgroup

    





    

        Iprscan
        IPR002155
	[PIRSF000429]
	
5

	
401

	
	
Thiolase

    





    

        Iprscan
        IPR002155
	[PTHR18919]
	
71

	
401

	
	
Thiolase

    





    

        Iprscan
        IPR020616
	[PF00108]
	
6

	
271

	
	
Thiolase, N-terminal

    





    

        Iprscan
        IPR020617
	[PF02803]
	
278

	
399

	
	
Thiolase, C-terminal

    





    

        Iprscan
        IPR002155
	[TIGR01930]
	
10

	
399

	
	
Thiolase

    





    

        Iprscan
        IPR020615
	[PS00098]
	
91

	
109

	
	
Thiolase, acyl-enzyme intermediate active site

    





    

        Iprscan
        IPR020610
	[PS00099]
	
382

	
395

	
	
Thiolase, active site

    





    

        Iprscan
        IPR020613
	[PS00737]
	
347

	
363

	
	
Thiolase, conserved site

    





    

        Iprscan
        
	[seg]
	
182

	
188

	
	
-

    





    

        
            
                
            
                
        
PDA8Z0A6

        
72

	
243

	
S=218 I=33 E=5.66098e-19

    	
    





    

        
            
                
            
                
        
PD985894

        
86

	
399

	
S=187 I=28 E=3.0117e-15

    	
    





    

        
            
                
            
                
        
PD859032

        
296

	
352

	
S=174 I=60 E=1.22483e-13

    	
    





    

        
            
                
            
                
        
PDA5L2P0

        
123

	
276

	
S=157 I=31 E=1.5074e-11

    	
    





    

        
            
                
            
                
        
PD858891

        
346

	
399

	
S=153 I=65 E=4.6418e-11

    	
    





    

        
            
                
            
                
        
PD621605

        
250

	
297

	
S=141 I=58 E=1.42818e-09

    	
    





    

        
            
                
            
                
        
PDA702A7

        
189

	
214

	
S=140 I=96 E=1.70025e-09

    	
    





    

        
            
                
            
                
        
PD464408

        
6

	
270

	
S=130 I=26 E=2.67331e-08

    	
    





    

        
            
                
            
                
        
PD542989

        
258

	
360

	
S=124 I=26 E=1.54219e-07

    	
    





    

        
            
                
            
                
        
PDA0R2V3

        
126

	
150

	
S=122 I=96 E=2.28312e-07

    	
    





    

        Iprscan
        IPR016039
	[SSF53901]
	
2

	
276

	
	
Thiolase-like

    





    

        Iprscan
        IPR016039
	[SSF53901]
	
277

	
401

	
	
Thiolase-like

    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
  Validation code (copy this one 9lCbe5ty)  
 
     



Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            238 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            284 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            4 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                12 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr21150.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr21150.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr21150.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBr4KyuH/XFF4834R_chr21150.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    •