3 hits
XFF4834R_chr11320 | prpC | XFF4834R_chr11320 | Probable 2-methylcitrate synthase |
XFF4834R_chr40260 | XFF4834R_chr_4652516_4653571_f2_XFF4834R-XFF4834R_chr40260 | XFF4834R_chr40260 | putative PrpF protein |
XFF4834R_chr40480 | acsA | XFF4834R_chr40480 | probable acetyl-CoA synthetase |
![]() XFF4834R_chr_1214 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr11330 |
ID | prpC |
AC | XFF4834R_chr11320 |
LT | XFF4834R_chr11320 |
OR | XFF4834R_chr from 1261369 to 1262523 on strand + |
DE | Probable 2-methylcitrate synthase |
IP | Citrate synthase-like |
CL | 1.1.2.3 Propionate degradation GO:0019543 |
EC | |
GO |
InterPro Biological Process: cellular carbohydrate metabolic process (GO:0044262) Biological Process: tricarboxylic acid cycle (GO:0006099) Cellular Component: cytoplasm (GO:0005737) acyl groups converted into alkyl on transfer (GO:0046912) Curated |
PM | |
AN | |
CC | COG: [C] Energy production and conversion; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by fguerin (20100817) |
MW | 42458.9 Da |
SQ | 384 aa |
........10........20........30........40........50 |
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XFF4834R_chr12630 lcl|gltA-XFF4834R_chr12630 |
17 |
371 |
S=468 I=33 E=3.70271e-50 |
citrate synthase |
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NP_641474.1 lcl|prpC-XAC1138 |
1 |
384 |
S=2043 I=99 E=0 |
methylcitrate synthase |
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YP_362888.1 lcl|XCV1157 |
1 |
384 |
S=2030 I=98 E=0 |
methylcitrate synthase |
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NP_636407.1 lcl|prpC-XCC1032 |
1 |
384 |
S=2015 I=97 E=0 |
methylcitrate synthase |
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1 |
383 |
S=1769 I=84 E=0 |
probable 2-methylcitrate synthase protein |
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17 |
383 |
S=472 I=32 E=5.18327e-50 |
putative citrate synthase protein |
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YP_365235.1 lcl|gltA-XCV3504 |
17 |
371 |
S=468 I=33 E=1.40044e-49 |
type II citrate synthase |
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NP_643695.1 lcl|gltA-XAC3388 |
17 |
371 |
S=468 I=33 E=1.40044e-49 |
type II citrate synthase |
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NP_638581.1 lcl|gltA-XCC3235 |
17 |
371 |
S=466 I=33 E=3.01632e-49 |
type II citrate synthase |
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2 |
383 |
S=1671 I=80 E=0 |
2-methylcitrate synthase ; Transferase |
Pubmed 11772636 |
|
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12 |
383 |
S=1662 I=82 E=0 |
2-methylcitrate synthase 2 ; Transferase |
||
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10 |
383 |
S=1656 I=81 E=0 |
Methylcitrate synthase ; Transferase |
Pubmed 11495997 |
|
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9 |
384 |
S=1546 I=76 E=1.49959e-178 |
2-methylcitrate synthase EC=2.3.3.5 ; Transferase |
Pubmed 9006051 |
|
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17 |
384 |
S=998 I=51 E=3.86797e-112 |
Citrate synthase ; Transferase |
Pubmed 18004300 |
|
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4 |
384 |
S=1551 I=76 E=2.61778e-179 |
2-methylcitrate synthase EC=2.3.3.5 ; Transferase |
||
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9 |
384 |
S=1546 I=76 E=1.02007e-178 |
2-methylcitrate synthase EC=2.3.3.5 ; Transferase |
||
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17 |
384 |
S=692 I=39 E=3.37201e-75 |
Citrate synthase 2 EC=2.3.3.1 ; Allosteric enzyme Phosphoprotein Transferase Tricarboxylic acid cycle |
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17 |
383 |
S=665 I=40 E=6.24659e-72 |
2-methylcitrate synthase 2 EC=2.3.3.5 ; Transferase |
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17 |
384 |
S=662 I=39 E=1.56036e-71 |
2-methylcitrate synthase 1 EC=2.3.3.5 ; Transferase |
||
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IPR002020 [PR00143] | 134 |
147 |
Citrate synthase-like |
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IPR002020 [PR00143] | 184 |
199 |
Citrate synthase-like |
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IPR002020 [PR00143] | 206 |
234 |
Citrate synthase-like |
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IPR002020 [PR00143] | 259 |
279 |
Citrate synthase-like |
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IPR002020 [PR00143] | 316 |
332 |
Citrate synthase-like |
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IPR002020 [PR00143] | 336 |
350 |
Citrate synthase-like |
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IPR016142 [G3DSA:1.10.580.10] | 21 |
278 |
Citrate synthase-like, large alpha subdomain |
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IPR002020 [PTHR11739] | 17 |
383 |
Citrate synthase-like |
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IPR002020 [PF00285] | 17 |
365 |
Citrate synthase-like |
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IPR011278 [TIGR01800] | 15 |
383 |
2-methylcitrate synthase/citrate synthase type I |
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IPR019810 [PS00480] | 266 |
278 |
Citrate synthase active site |
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17 |
378 |
S=710 I=43 E=1.47995e-78 |
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261 |
324 |
S=216 I=58 E=1.15185e-18 |
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1 |
36 |
S=154 I=86 E=3.74819e-11 |
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17 |
137 |
S=132 I=30 E=1.84513e-08 |
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25 |
96 |
S=122 I=38 E=3.33539e-07 |
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9 |
30 |
S=108 I=95 E=1.41691e-05 |
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9 |
30 |
S=106 I=91 E=2.49728e-05 |
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3 |
36 |
S=104 I=63 E=4.25053e-05 |
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IPR016141 [SSF48256] | 13 |
383 |
Citrate synthase-like, core |
Access unfiltered results
Miscellaneous analyses
![]() XFF4834R_chr40260 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr_4291 |
ID | XFF4834R_chr_4652516_4653571_f2_XFF4834R-XFF4834R_chr40260 |
AC | XFF4834R_chr40260 |
LT | XFF4834R_chr40260 |
OR | XFF4834R_chr from 4652516 to 4653571 on strand + |
DE | putative PrpF protein |
IP | PrpF protein |
CL | 1.1.2.3 Propionate degradation GO:0019543 |
EC | |
GO |
InterPro Curated |
PM | |
AN | |
CC | COG: [S] Function unknown; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by jacques (20100831) |
MW | 36454.2 Da |
SQ | 351 aa |
........10........20........30........40........50 |
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XFF4834R_chr11350 XFF4834R_chr11820977_1267176_f1_XFF4834R-XFF4834R_chr11350 |
4 |
211 |
S=353 I=42 E=3.18621e-36 |
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NP_644455.1 fldA-XAC4156 |
1 |
351 |
S=1511 I=85 E=5.65449e-176 |
FldA protein |
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YP_365985.1 XCV4254 |
8 |
351 |
S=1424 I=82 E=2.02015e-165 |
hypothetical protein |
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NP_639370.1 fldA-XCC4031 |
1 |
351 |
S=1264 I=72 E=4.63215e-146 |
FldA protein |
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XALc_0642 XALc_0642 |
4 |
211 |
S=343 I=42 E=1.67415e-34 |
hypothetical protein |
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NP_641478.1 XAC1142-XAC1142 |
4 |
211 |
S=339 I=42 E=5.92703e-34 |
hypothetical protein |
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YP_362891.1 XCV1160 |
4 |
211 |
S=329 I=42 E=9.56604e-33 |
hypothetical protein |
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NP_636411.1 XCC1036 |
4 |
211 |
S=324 I=39 E=4.06717e-32 |
hypothetical protein |
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6 |
350 |
S=1078 I=60 E=6.57757e-122 |
FldA protein |
Pubmed 11766961 |
|
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5 |
351 |
S=1050 I=59 E=1.54189e-118 |
ORF1 protein |
||
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4 |
211 |
S=457 I=44 E=1.13742e-46 |
3-methylitaconate isomerase |
Pubmed 16894175 |
|
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10 |
350 |
S=428 I=32 E=4.57797e-43 |
Uncharacterized protein yraM |
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5 |
350 |
S=366 I=33 E=1.43864e-35 |
Putative uncharacterized protein |
Pubmed 16549670 |
|
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3 |
350 |
S=667 I=40 E=3.00424e-72 |
Uncharacterized protein ybhH |
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3 |
350 |
S=667 I=40 E=3.00424e-72 |
Uncharacterized protein ybhH |
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3 |
350 |
S=667 I=40 E=3.00424e-72 |
Uncharacterized protein ybhH |
||
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10 |
350 |
S=428 I=32 E=3.1169e-43 |
Uncharacterized protein yraM |
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IPR007400 [PF04303] | 4 |
350 |
PrpF protein |
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[seg] | 157 |
171 |
- |
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[seg] | 213 |
233 |
- |
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[seg] | 328 |
338 |
- |
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120 |
350 |
S=252 I=32 E=4.23198e-23 |
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1 |
61 |
S=156 I=57 E=2.04974e-11 |
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62 |
111 |
S=138 I=52 E=2.63501e-09 |
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11 |
111 |
S=127 I=34 E=5.77038e-08 |
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[SSF54506] | 45 |
273 |
- |
Access unfiltered results
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Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
8 hits |
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Swiss-Prot ncbi-blastp |
4 hits |
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Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
1 hits |
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HAMAP scan |
0 hits |
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IprScan |
5 hits |
Miscellaneous analyses
![]() XFF4834R_chr40470 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr40490 |
ID | acsA |
AC | XFF4834R_chr40480 |
LT | XFF4834R_chr40480 |
OR | XFF4834R_chr from 4680820 to 4682763 on strand + |
DE | probable acetyl-CoA synthetase |
IP | Acetate--CoA ligase |
CL | 1.1.2.3 Propionate degradation GO:0019543 |
EC | |
GO |
InterPro Biological Process: metabolic process (GO:0008152) Molecular Function: AMP binding (GO:0016208) Molecular Function: acetate-CoA ligase activity (GO:0003987) Molecular Function: catalytic activity (GO:0003824) Curated |
PM | |
AN | publi sur genprotec. gene deja nomme acs j'ai rajoute acsA pour suivre xav (chez genprotec les 2 existent) |
CC | COG: [I] Lipid transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by brin (20100823) |
MW | 71349.3 Da |
SQ | 647 aa |
........10........20........30........40........50 |
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XFF4834R_chr20200 lcl|fadD-XFF4834R_chr20200 |
98 |
615 |
S=191 I=24 E=2.74437e-16 |
acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) |
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XFF4834R_chr38100 lcl|XFF4834R_chr41190322_4401866_r2_XFF4834R-XFF4834R_chr38100 |
495 |
614 |
S=163 I=37 E=6.66159e-13 |
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XFF4834R_chr39720 lcl|XFF4834R_chr_4572602_4573963_r3_XFF4834R-XFF4834R_chr39720 |
506 |
614 |
S=109 I=25 E=2.34663e-06 |
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NP_644478.1 lcl|acs-XAC4179 |
1 |
647 |
S=3420 I=99 E=0 |
acetyl-CoA synthetase |
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YP_366006.1 lcl|acsA-XCV4275 |
1 |
647 |
S=3408 I=99 E=0 |
acetyl-CoA synthetase |
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NP_639399.1 lcl|acs-XCC4060 |
1 |
647 |
S=3392 I=98 E=0 |
acetyl-CoA synthetase |
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1 |
647 |
S=3134 I=89 E=0 |
probable acetyl-coenzyme a synthetase protein |
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NP_636198.1 lcl|XCC0807 |
259 |
620 |
S=245 I=27 E=2.73182e-22 |
acyl-CoA synthetase |
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NP_641233.1 lcl|XAC0881-XAC0881 |
259 |
615 |
S=228 I=26 E=3.10831e-20 |
acyl-CoA synthetase |
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107 |
614 |
S=227 I=25 E=4.80673e-20 |
probable non-ribosomal peptide synthetase protein |
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107 |
549 |
S=172 I=24 E=2.08734e-13 |
probable non-ribosomal peptide synthetase protein |
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107 |
549 |
S=164 I=25 E=1.66257e-12 |
probable non-ribosomal peptide synthetase protein |
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107 |
547 |
S=163 I=25 E=2.37699e-12 |
probable non-ribosomal peptide synthetase protein |
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4 |
644 |
S=2399 I=69 E=0 |
Acetyl-coenzyme A synthetase EC=6.2.1.1 ; Acetylation ATP-binding Ligase Nucleotide-binding |
Pubmed 11726281 |
|
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4 |
647 |
S=2296 I=67 E=0 |
Acetyl-coenzyme A synthetase EC=6.2.1.1 ; Acetylation ATP-binding Ligase Nucleotide-binding Plasmid |
||
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2 |
646 |
S=2277 I=65 E=0 |
Acetyl-coenzyme A synthetase |
Pubmed 15262943 |
|
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9 |
646 |
S=2189 I=62 E=0 |
Acetyl-coenzyme A synthetase EC=6.2.1.1 ; Acetylation ATP-binding Ligase Nucleotide-binding |
Pubmed 8265357 |
|
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9 |
646 |
S=2172 I=62 E=0 |
Acetyl-coenzyme A synthetase EC=6.2.1.1 ; Acetylation ATP-binding Ligase Nucleotide-binding |
Pubmed 12493915 |
|
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1 |
647 |
S=3420 I=99 E=0 |
Acetyl-coenzyme A synthetase EC=6.2.1.1 ; Acetylation ATP-binding Ligase Nucleotide-binding |
||
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1 |
647 |
S=3398 I=98 E=0 |
Acetyl-coenzyme A synthetase EC=6.2.1.1 ; Acetylation ATP-binding Ligase Nucleotide-binding |
||
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1 |
647 |
S=3392 I=98 E=0 |
Acetyl-coenzyme A synthetase EC=6.2.1.1 ; Acetylation ATP-binding Ligase Nucleotide-binding |
||
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1 |
647 |
S=3392 I=98 E=0 |
Acetyl-coenzyme A synthetase EC=6.2.1.1 ; Acetylation ATP-binding Ligase Nucleotide-binding |
||
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1 |
647 |
S=2908 I=81 E=0 |
Acetyl-coenzyme A synthetase EC=6.2.1.1 ; Acetylation ATP-binding Ligase Nucleotide-binding |
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[G3DSA:3.40.50.980] | 77 |
273 |
- |
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[G3DSA:3.40.50.980] | 277 |
421 |
- |
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[G3DSA:2.30.38.10] | 432 |
515 |
- |
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[G3DSA:3.30.300.30] | 516 |
628 |
- |
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[MF_01123] | 1 |
644 |
- |
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[PTHR11968:SF42] | 24 |
647 |
- |
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[PTHR11968] | 24 |
647 |
- |
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IPR000873 [PF00501] | 108 |
546 |
AMP-dependent synthetase/ligase |
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[PF11930] | 18 |
100 |
- |
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IPR011904 [TIGR02188] | 16 |
643 |
Acetate--CoA ligase |
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IPR020845 [PS00455] | 260 |
271 |
AMP-binding, conserved site |
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304 |
380 |
S=229 I=57 E=4.36423e-20 |
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285 |
492 |
S=198 I=28 E=2.18435e-16 |
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286 |
502 |
S=195 I=28 E=5.74943e-16 |
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320 |
580 |
S=194 I=30 E=7.2123e-16 |
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394 |
442 |
S=184 I=71 E=1.10471e-14 |
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589 |
633 |
S=155 I=69 E=4.00465e-11 |
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281 |
319 |
S=151 I=65 E=1.18057e-10 |
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293 |
399 |
S=145 I=35 E=5.15241e-10 |
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541 |
621 |
S=135 I=43 E=9.72888e-09 |
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250 |
322 |
S=133 I=38 E=1.51766e-08 |
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[SSF56801] | 3 |
646 |
- |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
0 hits |
![]() |
Swiss-Prot ncbi-blastp |
0 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
4 hits |
![]() |
HAMAP scan |
0 hits |
![]() |
IprScan |
12 hits |
Miscellaneous analyses