4 hits
XFF4834R_chr01930 | gpsA | XFF4834R_chr01930 | probable Glycerol-3-phosphate dehydrogenase [NAD(P)+] |
XFF4834R_chr03420 | glpK | XFF4834R_chr03420 | probable glycerol kinase |
XFF4834R_chr27460 | dgoA | XFF4834R_chr27460 | putative 2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
XFF4834R_chr27490 | dgoK | XFF4834R_chr27490 | putative 2-oxo-3-deoxygalactonate kinase |
![]() XFF4834R_chr01920 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr01940 |
ID | gpsA |
AC | XFF4834R_chr01930 |
LT | XFF4834R_chr01930 |
OR | XFF4834R_chr from 228590 to 229615 on strand + |
DE | probable Glycerol-3-phosphate dehydrogenase [NAD(P)+] |
IP | NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal |
CL | 1.1.1.23 Galactose degradation GO:0019388 |
EC | |
GO |
InterPro Biological Process: metabolic process (GO:0008152) Biological Process: oxidation reduction (GO:0055114) Biological Process: glycerol-3-phosphate metabolic process (GO:0006072) Biological Process: glycerol-3-phosphate catabolic process (GO:0046168) Biological Process: carbohydrate metabolic process (GO:0005975) Cellular Component: cytoplasm (GO:0005737) Cellular Component: glycerol-3-phosphate dehydrogenase complex (GO:0009331) Molecular Function: oxidoreductase activity (GO:0016491) Molecular Function: binding (GO:0005488) Molecular Function: NAD or NADH binding (GO:0051287) Molecular Function: glycerol-3-phosphate dehydrogenase (NAD+) activity (GO:0004367) Molecular Function: catalytic activity (GO:0003824) Molecular Function: coenzyme binding (GO:0050662) NAD or NADP as acceptor (GO:0016616) acting on CH-OH group of donors (GO:0016614) Curated |
PM | |
AN | start changed to match XAC, XCV & XCC |
CC | COG: [C] Energy production and conversion; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by fguerin (20100423) |
MW | 35798.8 Da |
SQ | 341 aa |
........10........20........30........40........50 |
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NP_640578.1 lcl|gpsA-XAC0222 |
1 |
341 |
S=1607 I=93 E=0 |
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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YP_361938.1 lcl|gpsA-XCV0207 |
1 |
341 |
S=1603 I=93 E=0 |
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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NP_635599.1 lcl|gpsA-XCC0204 |
1 |
341 |
S=1545 I=89 E=3.852e-180 |
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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1 |
341 |
S=1343 I=78 E=1.22507e-155 |
probable glycerol-3-phosphate dehydrogenase [nad(p)+] protein |
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1 |
334 |
S=748 I=47 E=6.46704e-82 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
Pubmed 8041620 |
|
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1 |
336 |
S=728 I=45 E=1.79061e-79 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
Pubmed 12486043 |
|
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7 |
334 |
S=635 I=46 E=2.79196e-68 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
Pubmed 7836292 |
|
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59 |
334 |
S=614 I=47 E=1.00415e-65 |
Glycerol-3-phosphate dehydrogenase EC=1.1.1.94 ; Cytoplasm NAD Oxidoreductase Phospholipid biosynthesis |
Pubmed 16885444 |
|
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7 |
341 |
S=571 I=37 E=1.77786e-60 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
||
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7 |
334 |
S=560 I=36 E=3.50656e-59 |
Glycerol-3-phosphate dehydrogenase EC=1.1.1.94 ; Cytoplasm NAD Oxidoreductase Phospholipid biosynthesis |
Pubmed 17636987 |
|
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7 |
334 |
S=546 I=41 E=1.62534e-57 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
Pubmed 19077236 |
|
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7 |
334 |
S=490 I=36 E=1.15009e-50 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
Pubmed 18281406 |
|
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7 |
334 |
S=486 I=38 E=3.33184e-50 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
Pubmed 18367281 |
|
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6 |
328 |
S=460 I=34 E=4.39304e-47 |
Glycerol-3-phosphate dehydrogenase [NAD+], glycosomal EC=1.1.1.8 ; Glycosome Oxidoreductase |
||
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1 |
341 |
S=1607 I=93 E=0 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
||
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1 |
341 |
S=1603 I=93 E=0 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
||
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1 |
341 |
S=1569 I=91 E=0 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
||
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1 |
341 |
S=1569 I=91 E=0 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
||
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1 |
341 |
S=1545 I=89 E=1.00444e-178 |
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis |
||
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191 |
329 |
S=294 I=46 E=4.12813e-28 |
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95 |
192 |
S=176 I=42 E=7.71065e-14 |
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10 |
50 |
S=134 I=63 E=9.06194e-09 |
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46 |
93 |
S=120 I=53 E=4.6636e-07 |
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193 |
292 |
S=115 I=33 E=1.83317e-06 |
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8 |
87 |
S=114 I=39 E=2.69035e-06 |
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50 |
92 |
S=112 I=51 E=4.0178e-06 |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
193 hits |
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Swiss-Prot ncbi-blastp |
0 hits |
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Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
1 hits |
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HAMAP scan |
0 hits |
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IprScan |
0 hits |
Miscellaneous analyses
![]() XFF4834R_chr03410 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
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![]() XFF4834R_chr03430 |
ID | glpK |
AC | XFF4834R_chr03420 |
LT | XFF4834R_chr03420 |
OR | XFF4834R_chr from 392606 to 394105 on strand - |
DE | probable glycerol kinase |
IP | Glycerol kinase; Carbohydrate kinase, FGGY, conserved site |
CL | 1.1.1.23 Galactose degradation GO:0019388 |
EC | |
GO |
InterPro Biological Process: carbohydrate metabolic process (GO:0005975) Biological Process: glycerol-3-phosphate metabolic process (GO:0006072) Molecular Function: glycerol kinase activity (GO:0004370) alcohol group as acceptor (GO:0016773) Curated |
PM | |
AN | |
CC | COG: [C] Energy production and conversion; |
CC | MODEL: XFF4834R |
CC | STATUS: validated by jacques (20110712) |
MW | 54904.9 Da |
SQ | 499 aa |
........10........20........30........40........50 |
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XFF4834R_chr27370 lcl|xylB-XFF4834R_chr27370 |
132 |
433 |
S=126 I=24 E=1.58061e-08 |
xylulokinase |
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XFF4834R_chr41180 lcl|XFF4834R_chr_4781896_4783542_r1_XFF4834R-XFF4834R_chr41180 |
6 |
430 |
S=103 I=25 E=1.04658e-05 |
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XFF4834R_chr27370 lcl|xylB-XFF4834R_chr27370 |
132 |
433 |
S=126 I=24 E=1.58061e-08 |
xylulokinase |
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XFF4834R_chr41180 lcl|XFF4834R_chr_4781896_4783542_r1_XFF4834R-XFF4834R_chr41180 |
6 |
430 |
S=103 I=25 E=1.04658e-05 |
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NP_640714.1 lcl|glpK-XAC0358 |
1 |
499 |
S=2539 I=96 E=0 |
glycerol kinase |
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YP_362103.1 lcl|glpK-XCV0372 |
1 |
499 |
S=2528 I=95 E=0 |
glycerol kinase |
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NP_635753.1 lcl|glpK-XCC0358 |
1 |
499 |
S=2482 I=93 E=0 |
glycerol kinase |
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1 |
498 |
S=2246 I=83 E=0 |
probable glycerol kinase protein |
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NP_637124.1 lcl|XCC1757 |
67 |
433 |
S=133 I=23 E=8.24547e-09 |
D-xylulokinase |
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YP_363538.1 lcl|XCV1807 |
132 |
433 |
S=124 I=25 E=1.11784e-07 |
putative xylulose kinase |
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NP_642103.1 lcl|XAC1775-XAC1775 |
132 |
433 |
S=123 I=24 E=1.27402e-07 |
D-xylulokinase |
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3 |
497 |
S=1828 I=69 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase |
Pubmed 9972264 |
|
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3 |
497 |
S=1818 I=68 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase |
Pubmed 9540790 |
|
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5 |
497 |
S=1811 I=65 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Phosphoprotein Transferase |
||
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1 |
497 |
S=1792 I=64 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase |
Pubmed 15590099 |
|
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2 |
497 |
S=1616 I=60 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Phosphoprotein Transferase |
Pubmed 9162046 |
|
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2 |
496 |
S=1613 I=59 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Metal-binding Nucleotide-binding Transferase Zinc |
||
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2 |
496 |
S=1605 I=59 E=0 |
GlpK ; ATP-binding Glycerol metabolism Kinase Nucleotide-binding Plasmid Transferase |
Pubmed 12620823 |
|
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2 |
497 |
S=1593 I=57 E=0 |
Glycerol kinase ; ATP-binding metabolism Nucleotide-binding Transferase |
Pubmed 15383715 |
|
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3 |
496 |
S=1587 I=60 E=0 |
Glycerol kinase 1 EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase |
Pubmed 9141691 |
|
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2 |
498 |
S=1586 I=59 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Phosphoprotein Transferase |
||
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1 |
499 |
S=2540 I=96 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase |
||
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1 |
499 |
S=2528 I=95 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase |
||
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1 |
499 |
S=2482 I=93 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase |
||
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1 |
499 |
S=2482 I=93 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase |
||
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1 |
499 |
S=2478 I=93 E=0 |
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase |
||
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262 |
498 |
S=425 I=43 E=6.9253e-44 |
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8 |
245 |
S=403 I=44 E=2.96524e-41 |
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250 |
314 |
S=168 I=53 E=8.53948e-13 |
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77 |
381 |
S=159 I=27 E=1.17806e-11 |
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246 |
322 |
S=157 I=46 E=1.75933e-11 |
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453 |
496 |
S=146 I=55 E=3.78615e-10 |
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5 |
90 |
S=137 I=33 E=5.79928e-09 |
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3 |
193 |
S=133 I=20 E=1.59444e-08 |
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232 |
260 |
S=129 I=76 E=4.42211e-08 |
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194 |
259 |
S=127 I=45 E=8.9606e-08 |
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2 |
56 |
S=123 I=45 E=2.78344e-07 |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
99 hits |
![]() |
Swiss-Prot ncbi-blastp |
0 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
2 hits |
![]() |
HAMAP scan |
0 hits |
![]() |
IprScan |
0 hits |
Miscellaneous analyses
![]() XFF4834R_chr_2898 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
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![]() XFF4834R_chr27470 |
ID | dgoA |
AC | XFF4834R_chr27460 |
LT | XFF4834R_chr27460 |
OR | XFF4834R_chr from 3177468 to 3178100 on strand + |
DE | putative 2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
IP | KDPG/KHG aldolase |
CL | 1.1.1.23 Galactose degradation GO:0019388 |
EC | |
GO |
InterPro Biological Process: metabolic process (GO:0008152) Molecular Function: catalytic activity (GO:0003824) Curated |
PM | |
AN | |
CC | COG: [G] Carbohydrate transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by elauber (20110110) |
MW | 21831.6 Da |
SQ | 210 aa |
........10........20........30........40........50 |
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XFF4834R_chr21720 lcl|eda-XFF4834R_chr21720 |
25 |
163 |
S=126 I=31 E=4.53009e-09 |
multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase |
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NP_642094.1 lcl|dgoA-XAC1766 |
1 |
210 |
S=968 I=91 E=1.86023e-110 |
2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
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YP_363528.1 lcl|dgoA-XCV1797 |
1 |
210 |
S=945 I=89 E=1.04368e-107 |
2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
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NP_637114.1 lcl|dgoA-XCC1747 |
1 |
210 |
S=898 I=84 E=5.03632e-102 |
2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
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8 |
207 |
S=600 I=64 E=6.98721e-66 |
probable 2-dehydro-3-deoxy-6-phosphogalactonate aldolase protein |
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24 |
166 |
S=145 I=33 E=8.51881e-11 |
putativeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase protein |
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NP_637501.1 lcl|eda-XCC2140 |
25 |
163 |
S=132 I=31 E=3.9143e-09 |
keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
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NP_642388.1 lcl|eda-XAC2067 |
32 |
163 |
S=127 I=32 E=1.63547e-08 |
keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
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YP_363964.1 lcl|alkH-XCV2233 |
32 |
163 |
S=126 I=32 E=1.67881e-08 |
keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
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12 |
207 |
S=547 I=55 E=7.41038e-58 |
2-dehydro-3-deoxy-6-phosphogalactonate aldolase EC=4.1.2.21 ; Lyase |
Pubmed 7686882 |
|
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10 |
207 |
S=326 I=36 E=4.56419e-31 |
Putative 2-dehydro-3-deoxyphosphogalactonate aldolase |
Pubmed 15640208 |
|
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14 |
209 |
S=281 I=38 E=1.15533e-25 |
2-keto-3-deoxy-6-phosphogluconate aldolase |
Pubmed 15305924 |
|
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14 |
167 |
S=174 I=35 E=1.19378e-12 |
2-dehydro-3-deoxyphosphogluconate aldolase |
Pubmed 10760168 |
|
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14 |
166 |
S=166 I=31 E=9.34413e-12 |
2-keto-3-deoxy-6-phosphogluconate aldolase |
||
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12 |
207 |
S=547 I=55 E=5.13397e-58 |
2-dehydro-3-deoxy-6-phosphogalactonate aldolase EC=4.1.2.21 ; Lyase |
||
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14 |
164 |
S=166 I=32 E=8.12084e-12 |
KHG/KDPG aldolase EC=4.1.3.16 EC=4.1.2.14 ; Cytoplasm Lyase Multifunctional enzyme Schiff base |
||
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32 |
166 |
S=140 I=29 E=1.14808e-08 |
KHG/KDPG aldolase EC=4.1.3.16 EC=4.1.2.14 ; Cytoplasm Lyase Multifunctional enzyme Schiff base |
||
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11 |
139 |
S=136 I=31 E=3.38454e-08 |
Putative KHG/KDPG aldolase EC=4.1.3.16 EC=4.1.2.14 ; Cytoplasm Lyase Multifunctional enzyme Schiff base |
||
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11 |
167 |
S=124 I=33 E=1.01446e-06 |
2-dehydro-3-deoxy-phosphogluconate aldolase EC=4.1.2.14 ; Lyase Schiff base |
||
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IPR013785 [G3DSA:3.20.20.70] | 12 |
189 |
Aldolase-type TIM barrel |
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IPR000887 [PF01081] | 13 |
184 |
KDPG/KHG aldolase |
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IPR000887 [PS00160] | 126 |
139 |
KDPG/KHG aldolase |
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[seg] | 168 |
182 |
- |
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85 |
139 |
S=126 I=44 E=8.26111e-08 |
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186 |
210 |
S=125 I=96 E=1.13071e-07 |
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15 |
82 |
S=116 I=41 E=1.32174e-06 |
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[SSF51569] | 12 |
208 |
- |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
17 hits |
![]() |
Swiss-Prot ncbi-blastp |
11 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
2 hits |
![]() |
HAMAP scan |
0 hits |
![]() |
IprScan |
5 hits |
Miscellaneous analyses
![]() XFF4834R_chr27480 |
![]() DrawMap |
XML file
FASTA file |
Extract Sequence |
Codon Usage |
![]() |
![]() |
![]() XFF4834R_chr27500 |
ID | dgoK |
AC | XFF4834R_chr27490 |
LT | XFF4834R_chr27490 |
OR | XFF4834R_chr from 3180147 to 3181025 on strand + |
DE | putative 2-oxo-3-deoxygalactonate kinase |
IP | 2-keto-3-deoxy-galactonokinase |
CL | 1.1.1.23 Galactose degradation GO:0019388 |
EC | |
GO |
InterPro Curated |
PM | |
AN | other name 2-dehydro-3-deoxygalactonokinase |
CC | COG: [G] Carbohydrate transport and metabolism; |
CC | MODEL: XFF4834R |
CC | STATUS: curated by elauber (20100716) |
MW | 31084.1 Da |
SQ | 292 aa |
........10........20........30........40........50 |
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NP_642091.1 lcl|dgoK-XAC1763 |
1 |
292 |
S=1354 I=97 E=5.23632e-157 |
2-oxo-3-deoxygalactonate kinase |
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YP_363525.1 lcl|XCV1794 |
1 |
292 |
S=1329 I=95 E=4.957e-154 |
putative 2-oxo-3-deoxygalactonate kinase |
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NP_637111.1 lcl|dgoK-XCC1744 |
1 |
292 |
S=1187 I=82 E=9.1555e-137 |
2-oxo-3-deoxygalactonate kinase |
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1 |
290 |
S=910 I=62 E=3.20871e-103 |
probable 2-dehydro-3-deoxygalactonokinase protein |
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1 |
264 |
S=332 I=37 E=1.32388e-31 |
2-keto-3-deoxy-galactonokinase |
Pubmed 15305924 |
|
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2 |
268 |
S=332 I=32 E=1.48277e-31 |
Putative 2-keto-3-deoxy-galactonokinase |
Pubmed 15640208 |
|
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2 |
286 |
S=307 I=32 E=1.6138e-28 |
2-dehydro-3-deoxygalactonokinase EC=2.7.1.58 ; ATP-binding Nucleotide-binding Transferase |
Pubmed 7686882 |
|
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138 |
237 |
S=199 I=48 E=1.74181e-15 |
Putative 2-keto-3-deoxygalactokinase |
Pubmed 18262744 |
|
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2 |
286 |
S=307 I=32 E=1.099e-28 |
2-dehydro-3-deoxygalactonokinase EC=2.7.1.58 ; ATP-binding Nucleotide-binding Transferase |
||
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IPR007729 [PF05035] | 5 |
286 |
2-keto-3-deoxy-galactonokinase |
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70 |
272 |
S=424 I=49 E=7.54961e-44 |
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230 |
292 |
S=212 I=87 E=3.06237e-18 |
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1 |
71 |
S=187 I=53 E=3.60507e-15 |
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72 |
106 |
S=149 I=80 E=1.47529e-10 |
Access unfiltered results
![]() |
Set of Uniprot with relevant PubMed cross-references ncbi-blastp |
4 hits |
![]() |
Swiss-Prot ncbi-blastp |
1 hits |
![]() |
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp |
0 hits |
![]() |
HAMAP scan |
0 hits |
![]() |
IprScan |
1 hits |
Miscellaneous analyses