Xanthomonas fuscans subsp. fuscans

4 hits

  1. XFF4834R_chr01930gpsAXFF4834R_chr01930probable Glycerol-3-phosphate dehydrogenase [NAD(P)+]
  2. XFF4834R_chr03420glpKXFF4834R_chr03420probable glycerol kinase
  3. XFF4834R_chr27460dgoAXFF4834R_chr27460putative 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
  4. XFF4834R_chr27490dgoKXFF4834R_chr27490putative 2-oxo-3-deoxygalactonate kinase

gpsA XFF4834R_chr01930
XFF4834R_chr01920
XFF4834R_chr01920 		Cluster
DrawMap 		XML file

FASTA file 		Extract
Sequence 		Codon
Usage 		Framed OrthoMCL XFF4834R_chr01940
XFF4834R_chr01940
ID gpsA
AC XFF4834R_chr01930
LT XFF4834R_chr01930
OR XFF4834R_chr from 228590 to 229615 on strand +
DE probable Glycerol-3-phosphate dehydrogenase [NAD(P)+]
IP NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal
CL 1.1.1.23 Galactose degradation GO:0019388
EC
GO InterPro
Biological Process: glycerol-3-phosphate metabolic process (GO:0006072)
Biological Process: metabolic process (GO:0008152)
Biological Process: carbohydrate metabolic process (GO:0005975)
Biological Process: glycerol-3-phosphate catabolic process (GO:0046168)
Biological Process: oxidation reduction (GO:0055114)
Cellular Component: cytoplasm (GO:0005737)
Cellular Component: glycerol-3-phosphate dehydrogenase complex (GO:0009331)
Molecular Function: NAD or NADH binding (GO:0051287)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: coenzyme binding (GO:0050662)
Molecular Function: glycerol-3-phosphate dehydrogenase (NAD+) activity (GO:0004367)
Molecular Function: binding (GO:0005488)
NAD or NADP as acceptor (GO:0016616)
acting on CH-OH group of donors (GO:0016614)

Curated
PM
AN start changed to match XAC, XCV & XCC
CC COG: [C] Energy production and conversion;
CC MODEL: XFF4834R
CC STATUS: curated by fguerin (20100423)
MW 35798.8 Da
SQ 341 aa
  
........10........20........30........40........50
         |         |         |         |         |
MSDLTHKIAVLGAGSWGTALAALLARHGHPTVLWGRDAAMVDTIDRTHEN
ARYLPGIALPDSLRATTDLQAAVADATWILVVVPSHAFTETIRLIAPLRP
AGAGVAWATKGFEPGSGRFLHEVARDILGPSVPLAVVTGPSFAKEVTLGL
PTAITVHGDDAAFAQVVADAMHGPTFRAYTGDDMVGAELGGAMKNVLAVA
TGVADGMQLGLNARAGLITRGLNEMLRLAAVIGARPETLMGLAGLGDLVL
TCTGDLSRNRRLGLALGRGQSLDEAIREIGQVVESVQTADEVMRQAEHHG
IELPISNAVRAVLHGEITPEAGLKELLARERKPEYPQTLFT

    






    

        
            
                XFF4834R
            
                
        
NP_640578.1 lcl|gpsA-XAC0222

        
1

	
341

	
S=1607 I=93 E=0

	
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_361938.1 lcl|gpsA-XCV0207

        
1

	
341

	
S=1603 I=93 E=0

	
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635599.1 lcl|gpsA-XCC0204

        
1

	
341

	
S=1545 I=89 E=3.852e-180

	
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|gpsA-XALc_3078

        
1

	
341

	
S=1343 I=78 E=1.22507e-155

	
probable glycerol-3-phosphate dehydrogenase [nad(p)+] protein

     	

   





    

        
                pubmed
        
        

        
1

	
334

	
S=748 I=47 E=6.46704e-82

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

	
Pubmed 8041620

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
336

	
S=728 I=45 E=1.79061e-79

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

	
Pubmed 12486043

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
334

	
S=635 I=46 E=2.79196e-68

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

	
Pubmed 7836292

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
59

	
334

	
S=614 I=47 E=1.00415e-65

	
Glycerol-3-phosphate dehydrogenase EC=1.1.1.94 ; Cytoplasm NAD Oxidoreductase Phospholipid biosynthesis

	
Pubmed 16885444

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
341

	
S=571 I=37 E=1.77786e-60

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

	
Pubmed 7592341,8760912

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
334

	
S=560 I=36 E=3.50656e-59

	
Glycerol-3-phosphate dehydrogenase EC=1.1.1.94 ; Cytoplasm NAD Oxidoreductase Phospholipid biosynthesis

	
Pubmed 17636987

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
334

	
S=546 I=41 E=1.62534e-57

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

	
Pubmed 19077236

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
334

	
S=490 I=36 E=1.15009e-50

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

	
Pubmed 18281406

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
7

	
334

	
S=486 I=38 E=3.33184e-50

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

	
Pubmed 18367281

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
6

	
328

	
S=460 I=34 E=4.39304e-47

	
Glycerol-3-phosphate dehydrogenase [NAD+], glycosomal EC=1.1.1.8 ; Glycosome Oxidoreductase

	
Pubmed 8920004,10801498

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PQU9|GPDA_XANAC

        
1

	
341

	
S=1607 I=93 E=0

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

    





    

        
            
                sp_Pdown
            
        
        
sp|Q3BZ75|GPDA_XANC5

        
1

	
341

	
S=1603 I=93 E=0

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

    





    

        
            
                sp_Pdown
            
        
        
sp|Q5GV21|GPDA_XANOR

        
1

	
341

	
S=1569 I=91 E=0

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

    





    

        
            
                sp_Pdown
            
        
        
sp|Q2NYA5|GPDA_XANOM

        
1

	
341

	
S=1569 I=91 E=0

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PDY0|GPDA_XANCP

        
1

	
341

	
S=1545 I=89 E=1.00444e-178

	
Glycerol-3-phosphate dehydrogenase [NAD(P)+] EC=1.1.1.94 ; Cytoplasm Oxidoreductase Phospholipid biosynthesis

    





    

        
            
                
            
                
        
PD001278

        
191

	
329

	
S=294 I=46 E=4.12813e-28

    	
    





    

        
            
                
            
                
        
PD102920

        
95

	
192

	
S=176 I=42 E=7.71065e-14

    	
    





    

        
            
                
            
                
        
PD688331

        
10

	
50

	
S=134 I=63 E=9.06194e-09

    	
    





    

        
            
                
            
                
        
PD352232

        
46

	
93

	
S=120 I=53 E=4.6636e-07

    	
    





    

        
            
                
            
                
        
PDA0W356

        
193

	
292

	
S=115 I=33 E=1.83317e-06

    	
    





    

        
            
                
            
                
        
PDA8E236

        
8

	
87

	
S=114 I=39 E=2.69035e-06

    	
    





    

        
            
                
            
                
        
PDA8E1X8

        
50

	
92

	
S=112 I=51 E=4.0178e-06

    	
    




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                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            193 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            0 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            1 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                0 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr01930.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr01930.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr01930.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr01930.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






glpK XFF4834R_chr03420




    

         
             
            XFF4834R_chr03410
            
XFF4834R_chr03410
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr03430
            
XFF4834R_chr03430
            
        		

    





    

        ID
        glpK
    

    

        AC
        XFF4834R_chr03420
    

    

        LT
        XFF4834R_chr03420
    

    

        OR
        XFF4834R_chr from 392606 to 394105 on strand -
    

   

        DE
        probable glycerol kinase
  

   

        IP
        Glycerol kinase; Carbohydrate kinase, FGGY, conserved site
  
  
  
  

        CL
        1.1.1.23 Galactose degradation	GO:0019388 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: carbohydrate metabolic process (GO:0005975)
Biological Process: glycerol-3-phosphate metabolic process (GO:0006072)
Molecular Function: glycerol kinase activity (GO:0004370)
alcohol group as acceptor (GO:0016773)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [C] Energy production and conversion; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: validated by jacques (20110712)
  

  
  


    

        MW
        54904.9 Da
    


    

        SQ
        499 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MEKQYVLAIDQGTTSSRAMLFDRRGKVAGVAQREFGQIFPQPGWVEHNPR
EIMTSVYTTITELLNNAQIDARAIAGIGITNQRETAVVWDKATGQPIYNA
IVWQSRQTKDICTQLKEAGHEQMVRDKTGLLIDAYFSGTKVKWILDHVEG
ARERAQKGELAFGTIDSWLIWNLTGGKVHVTDYTNASRTMMFNIHTLEWD
AELLAMLDVPAQMLPEVRSSSEVYGMTQTQYFYGEQVPIAGIAGDQQAAL
FGQACFEPGMAKNTYGTGCFMLMNTGDKAVASKAGLLTTIAWGIDGKVEY
ALEGAIFVAGSVVQWLRDGLRMLGKASDSQAYAERAGDNDGVYIVPAFVG
LGAPYWRSDIRGAVFGLTRGTTKEHFVRAAVESMAYQTRDVLTAMRSDSG
IELKELRADGGAIANDFMAQFQSDILNVPVLRPEVAETTALGAAYLAGLA
TGFWSSREEIAKQWAVDRRFEPAMADDKREALYAGWQQAVEATMGFRIS

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr27370 lcl|xylB-XFF4834R_chr27370

        
132

	
433

	
S=126 I=24 E=1.58061e-08

	
xylulokinase

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr41180 lcl|XFF4834R_chr_4781896_4783542_r1_XFF4834R-XFF4834R_chr41180

        
6

	
430

	
S=103 I=25 E=1.04658e-05

	

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr27370 lcl|xylB-XFF4834R_chr27370

        
132

	
433

	
S=126 I=24 E=1.58061e-08

	
xylulokinase

     	

   





    

        
            
                XFF4834R
            
                
        
XFF4834R_chr41180 lcl|XFF4834R_chr_4781896_4783542_r1_XFF4834R-XFF4834R_chr41180

        
6

	
430

	
S=103 I=25 E=1.04658e-05

	

     	

   





    

        
            
                XFF4834R
            
                
        
NP_640714.1 lcl|glpK-XAC0358

        
1

	
499

	
S=2539 I=96 E=0

	
glycerol kinase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_362103.1 lcl|glpK-XCV0372

        
1

	
499

	
S=2528 I=95 E=0

	
glycerol kinase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_635753.1 lcl|glpK-XCC0358

        
1

	
499

	
S=2482 I=93 E=0

	
glycerol kinase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|glpK-XALc_0443

        
1

	
498

	
S=2246 I=83 E=0

	
probable glycerol kinase protein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_637124.1 lcl|XCC1757

        
67

	
433

	
S=133 I=23 E=8.24547e-09

	
D-xylulokinase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_363538.1 lcl|XCV1807

        
132

	
433

	
S=124 I=25 E=1.11784e-07

	
putative xylulose kinase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_642103.1 lcl|XAC1775-XAC1775

        
132

	
433

	
S=123 I=24 E=1.27402e-07

	
D-xylulokinase

     	

   





    

        
                pubmed
        
        

        
3

	
497

	
S=1828 I=69 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase

	
Pubmed 9972264

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
497

	
S=1818 I=68 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase

	
Pubmed 9540790

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
5

	
497

	
S=1811 I=65 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Phosphoprotein Transferase

	
Pubmed 2127799,9579061

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
1

	
497

	
S=1792 I=64 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase

	
Pubmed 15590099

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
497

	
S=1616 I=60 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Phosphoprotein Transferase

	
Pubmed 9162046

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
496

	
S=1613 I=59 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Metal-binding Nucleotide-binding Transferase Zinc

	
Pubmed 2826434,1372899

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
496

	
S=1605 I=59 E=0

	
GlpK ; ATP-binding Glycerol metabolism Kinase Nucleotide-binding Plasmid Transferase

	
Pubmed 12620823

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
497

	
S=1593 I=57 E=0

	
Glycerol kinase ; ATP-binding metabolism Nucleotide-binding Transferase

	
Pubmed 15383715

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
3

	
496

	
S=1587 I=60 E=0

	
Glycerol kinase 1 EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase

	
Pubmed 9141691

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
498

	
S=1586 I=59 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Phosphoprotein Transferase

	
Pubmed 9162046,14717590

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PQG7|GLPK_XANAC

        
1

	
499

	
S=2540 I=96 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q3BYR0|GLPK_XANC5

        
1

	
499

	
S=2528 I=95 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q8PDI0|GLPK_XANCP

        
1

	
499

	
S=2482 I=93 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase

    





    

        
            
                sp_Pdown
            
        
        
sp|B0RMN0|GLPK_XANCB

        
1

	
499

	
S=2482 I=93 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase

    





    

        
            
                sp_Pdown
            
        
        
sp|Q4UZR8|GLPK_XANC8

        
1

	
499

	
S=2478 I=93 E=0

	
Glycerol kinase EC=2.7.1.30 ; ATP-binding metabolism Nucleotide-binding Transferase

    





    

        
            
                
            
                
        
PD130304

        
262

	
498

	
S=425 I=43 E=6.9253e-44

    	
    





    

        
            
                
            
                
        
PD130304

        
8

	
245

	
S=403 I=44 E=2.96524e-41

    	
    





    

        
            
                
            
                
        
PD557882

        
250

	
314

	
S=168 I=53 E=8.53948e-13

    	
    





    

        
            
                
            
                
        
PD242769

        
77

	
381

	
S=159 I=27 E=1.17806e-11

    	
    





    

        
            
                
            
                
        
PD477597

        
246

	
322

	
S=157 I=46 E=1.75933e-11

    	
    





    

        
            
                
            
                
        
PD800087

        
453

	
496

	
S=146 I=55 E=3.78615e-10

    	
    





    

        
            
                
            
                
        
PD879263

        
5

	
90

	
S=137 I=33 E=5.79928e-09

    	
    





    

        
            
                
            
                
        
PDA92830

        
3

	
193

	
S=133 I=20 E=1.59444e-08

    	
    





    

        
            
                
            
                
        
PDA1I650

        
232

	
260

	
S=129 I=76 E=4.42211e-08

    	
    





    

        
            
                
            
                
        
PD744076

        
194

	
259

	
S=127 I=45 E=8.9606e-08

    	
    





    

        
            
                
            
                
        
PD001187

        
2

	
56

	
S=123 I=45 E=2.78344e-07

    	
    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
  Validation code (copy this one 1n4uXX3u)  
 
     



Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            99 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            0 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            2 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                0 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr03420.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr03420.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr03420.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr03420.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






dgoA XFF4834R_chr27460




    

         
             
            XFF4834R_chr_2898
            
XFF4834R_chr_2898
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr27470
            
XFF4834R_chr27470
            
        		

    





    

        ID
        dgoA
    

    

        AC
        XFF4834R_chr27460
    

    

        LT
        XFF4834R_chr27460
    

    

        OR
        XFF4834R_chr from 3177468 to 3178100 on strand +
    

   

        DE
        putative 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
  

   

        IP
        KDPG/KHG aldolase
  
  
  
  

        CL
        1.1.1.23 Galactose degradation	GO:0019388 
    

  

        EC
        
    

    
    

        GO
        
            InterPro
Biological Process: metabolic process (GO:0008152)
Molecular Function: catalytic activity (GO:0003824)


            Curated

        		
    


  

        PM
        
    

  

        AN
        
    

  

        CC
        COG: [G] Carbohydrate transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by elauber (20110110)
  

  
  


    

        MW
        21831.6 Da
    


    

        SQ
        210 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MTSDTTASPFVLPLVAILRGITPEETLDHVGALIDAGFDAIEIPLNSPRW
EQSIALAQQTFGARAWIGAGTVLRNEDVDTLAGIGARFIVTPNTRPSLIR
HAVSCGLTVVAGFATASEAFDAIDAGATILKLFPAATYGAAHVRALRSVL
PTHIPVYVVGGVSPQTLAGFIAQGAAGAGIGGELYRPGQSLETTQTHARA
FVQAYQELQG

    






    

        
            
                XFF4834R
            
                
        
XFF4834R_chr21720 lcl|eda-XFF4834R_chr21720

        
25

	
163

	
S=126 I=31 E=4.53009e-09

	
multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_642094.1 lcl|dgoA-XAC1766

        
1

	
210

	
S=968 I=91 E=1.86023e-110

	
2-dehydro-3-deoxy-6-phosphogalactonate aldolase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_363528.1 lcl|dgoA-XCV1797

        
1

	
210

	
S=945 I=89 E=1.04368e-107

	
2-dehydro-3-deoxy-6-phosphogalactonate aldolase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_637114.1 lcl|dgoA-XCC1747

        
1

	
210

	
S=898 I=84 E=5.03632e-102

	
2-dehydro-3-deoxy-6-phosphogalactonate aldolase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|dgoA-XALc_1190

        
8

	
207

	
S=600 I=64 E=6.98721e-66

	
probable 2-dehydro-3-deoxy-6-phosphogalactonate aldolase protein

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|alkH-XALc_1834

        
24

	
166

	
S=145 I=33 E=8.51881e-11

	
putativeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase protein

     	

   





    

        
            
                XFF4834R
            
                
        
NP_637501.1 lcl|eda-XCC2140

        
25

	
163

	
S=132 I=31 E=3.9143e-09

	
keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_642388.1 lcl|eda-XAC2067

        
32

	
163

	
S=127 I=32 E=1.63547e-08

	
keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_363964.1 lcl|alkH-XCV2233

        
32

	
163

	
S=126 I=32 E=1.67881e-08

	
keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase

     	

   





    

        
                pubmed
        
        

        
12

	
207

	
S=547 I=55 E=7.41038e-58

	
2-dehydro-3-deoxy-6-phosphogalactonate aldolase EC=4.1.2.21 ; Lyase

	
Pubmed 7686882

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
10

	
207

	
S=326 I=36 E=4.56419e-31

	
Putative 2-dehydro-3-deoxyphosphogalactonate aldolase

	
Pubmed 15640208

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
14

	
209

	
S=281 I=38 E=1.15533e-25

	
2-keto-3-deoxy-6-phosphogluconate aldolase

	
Pubmed 15305924

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
14

	
167

	
S=174 I=35 E=1.19378e-12

	
2-dehydro-3-deoxyphosphogluconate aldolase

	
Pubmed 10760168

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
14

	
166

	
S=166 I=31 E=9.34413e-12

	
2-keto-3-deoxy-6-phosphogluconate aldolase

	
Pubmed 8031084,10368143

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|Q6BF16|DGOA_ECOLI

        
12

	
207

	
S=547 I=55 E=5.13397e-58

	
2-dehydro-3-deoxy-6-phosphogalactonate aldolase EC=4.1.2.21 ; Lyase

    





    

        
            
                sp_Pdown
            
        
        
sp|P50846|ALKH_BACSU

        
14

	
164

	
S=166 I=32 E=8.12084e-12

	
KHG/KDPG aldolase EC=4.1.3.16 EC=4.1.2.14 ; Cytoplasm Lyase Multifunctional enzyme Schiff base

    





    

        
            
                sp_Pdown
            
        
        
sp|Q00384|ALKH_ZYMMO

        
32

	
166

	
S=140 I=29 E=1.14808e-08

	
KHG/KDPG aldolase EC=4.1.3.16 EC=4.1.2.14 ; Cytoplasm Lyase Multifunctional enzyme Schiff base

    





    

        
            
                sp_Pdown
            
        
        
sp|O83578|ALKH_TREPA

        
11

	
139

	
S=136 I=31 E=3.38454e-08

	
Putative KHG/KDPG aldolase EC=4.1.3.16 EC=4.1.2.14 ; Cytoplasm Lyase Multifunctional enzyme Schiff base

    





    

        
            
                sp_Pdown
            
        
        
sp|O68283|ALKD_PSEAE

        
11

	
167

	
S=124 I=33 E=1.01446e-06

	
2-dehydro-3-deoxy-phosphogluconate aldolase EC=4.1.2.14 ; Lyase Schiff base

    





    

        Iprscan
        IPR013785
	[G3DSA:3.20.20.70]
	
12

	
189

	
	
Aldolase-type TIM barrel

    





    

        Iprscan
        IPR000887
	[PF01081]
	
13

	
184

	
	
KDPG/KHG aldolase

    





    

        Iprscan
        IPR000887
	[PS00160]
	
126

	
139

	
	
KDPG/KHG aldolase

    





    

        Iprscan
        
	[seg]
	
168

	
182

	
	
-

    





    

        
            
                
            
                
        
PD328925

        
85

	
139

	
S=126 I=44 E=8.26111e-08

    	
    





    

        
            
                
            
                
        
PDA1U349

        
186

	
210

	
S=125 I=96 E=1.13071e-07

    	
    





    

        
            
                
            
                
        
PD834346

        
15

	
82

	
S=116 I=41 E=1.32174e-06

    	
    





    

        Iprscan
        
	[SSF51569]
	
12

	
208

	
	
-

    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
  Validation code (copy this one RyGul4vA)  
 
     



Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            17 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            11 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            2 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                5 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr27460.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr27460.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr27460.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr27460.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    

    






dgoK XFF4834R_chr27490




    

         
             
            XFF4834R_chr27480
            
XFF4834R_chr27480
            
        		


       
           
	   Cluster
	   
DrawMap
	   
        		
	
        
            XML file
        	


	    FASTA file
        		
	
	
             
            Extract
Sequence
            
        		
	
	
             
            Codon
Usage
            
        		
    
    
            
            Framed
            
     
  	



	
            OrthoMCL
            
    
  	
    
    
    

     


	
             
            XFF4834R_chr27500
            
XFF4834R_chr27500
            
        		

    





    

        ID
        dgoK
    

    

        AC
        XFF4834R_chr27490
    

    

        LT
        XFF4834R_chr27490
    

    

        OR
        XFF4834R_chr from 3180147 to 3181025 on strand +
    

   

        DE
        putative 2-oxo-3-deoxygalactonate kinase
  

   

        IP
        2-keto-3-deoxy-galactonokinase
  
  
  
  

        CL
        1.1.1.23 Galactose degradation	GO:0019388 
    

  

        EC
        
    

    
    

        GO
        
            InterPro



            Curated

        		
    


  

        PM
        
    

  

        AN
        other name 2-dehydro-3-deoxygalactonokinase
    

  

        CC
        COG: [G] Carbohydrate transport and metabolism; 
    

    

        CC
        MODEL: XFF4834R 
  
    
  

        CC
        STATUS: curated by elauber (20100716)
  

  
  


    

        MW
        31084.1 Da
    


    

        SQ
        292 aa
    

    

         
        
........10........20........30........40........50
         |         |         |         |         |
MIAIDWGTSSLRGYLLDADGKVRAQRRGSDGILTCQGRFDDVLAGLIDGW
DGPLLLSGMIGSRNGWVEQPYLPCPADTAALAQAMRCYDALLPGRALWFV
PGVSTGEQTGVPDVMRGEETQLVGLIAALGDGEHVACLPGTHSKWARIAN
GQLTGFATVMTGELYAVLRRHSILGKLMDDDHAELDAAAFVQGVDRSNDP
GGLSHHLFGTRTLGLFERLSSAALPSYLSGVLIGHELREHRGGHAIVHLV
GSPALAQRYALALQHLGVESRMHPEDLAAAGLFALARQRGLA

    





Show or not Domain decomposition
 

    

        
            
                XFF4834R
            
                
        
NP_642091.1 lcl|dgoK-XAC1763

        
1

	
292

	
S=1354 I=97 E=5.23632e-157

	
2-oxo-3-deoxygalactonate kinase

     	

   





    

        
            
                XFF4834R
            
                
        
YP_363525.1 lcl|XCV1794

        
1

	
292

	
S=1329 I=95 E=4.957e-154

	
putative 2-oxo-3-deoxygalactonate kinase

     	

   





    

        
            
                XFF4834R
            
                
        
NP_637111.1 lcl|dgoK-XCC1744

        
1

	
292

	
S=1187 I=82 E=9.1555e-137

	
2-oxo-3-deoxygalactonate kinase

     	

   





    

        
            
                XFF4834R
            
                
        
 lcl|dgoK-XALc_1187

        
1

	
290

	
S=910 I=62 E=3.20871e-103

	
probable 2-dehydro-3-deoxygalactonokinase protein

     	

   





    

        
                pubmed
        
        

        
1

	
264

	
S=332 I=37 E=1.32388e-31

	
2-keto-3-deoxy-galactonokinase

	
Pubmed 15305924

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
268

	
S=332 I=32 E=1.48277e-31

	
Putative 2-keto-3-deoxy-galactonokinase

	
Pubmed 15640208

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
2

	
286

	
S=307 I=32 E=1.6138e-28

	
2-dehydro-3-deoxygalactonokinase EC=2.7.1.58 ; ATP-binding Nucleotide-binding Transferase

	
Pubmed 7686882

    

    

         
        
prodomImg

    





    

        
                pubmed
        
        

        
138

	
237

	
S=199 I=48 E=1.74181e-15

	
Putative 2-keto-3-deoxygalactokinase

	
Pubmed 18262744

    

    

         
        
prodomImg

    





    

        
            
                sp_Pdown
            
        
        
sp|P31459|DGOK_ECOLI

        
2

	
286

	
S=307 I=32 E=1.099e-28

	
2-dehydro-3-deoxygalactonokinase EC=2.7.1.58 ; ATP-binding Nucleotide-binding Transferase

    





    

        Iprscan
        IPR007729
	[PF05035]
	
5

	
286

	
	
2-keto-3-deoxy-galactonokinase

    





    

        
            
                
            
                
        
PD127871

        
70

	
272

	
S=424 I=49 E=7.54961e-44

    	
    





    

        
            
                
            
                
        
PDA9B9E3

        
230

	
292

	
S=212 I=87 E=3.06237e-18

    	
    





    

        
            
                
            
                
        
PDA1G2V8

        
1

	
71

	
S=187 I=53 E=3.60507e-15

    	
    





    

        
            
                
            
                
        
PDA2F0W3

        
72

	
106

	
S=149 I=80 E=1.47529e-10

    	
    




Show or not Suggestions
Suggest an annotation


Move your mouse over each field to get more informations


ID


DE


EC


GO


PM



CC


CL

 
  Your email  
 
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Show or not Access unfiltered results






    

       
            
                pubmed
            
        
	    
            
Set of Uniprot with relevant PubMed cross-references ncbi-blastp

        		
 	    
            4 hits
        
    

    

        
            
                swiss-prot
            
        
	    
            
Swiss-Prot ncbi-blastp

        		
 	    
            1 hits
        
    

    
    
    

        
            
                XFF4834R
            
        
    	
            
Xanthomonas fuscans subsp. fuscans proteome ncbi-blastp

        		        
        
            0 hits
        
    

        
    

        
            
                hamap
            
        
	
            
HAMAP scan

        		        
        
            0 hits
        
    

    
    

	    
            
                Interpro Scan
            
            
	        
                
IprScan

            		        
            
                1 hits
            
    








Show or not Miscellaneous analyses




    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetLocalBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr27490.xml_fasta", "https://iant.toulouse.inra.fr/bacteria/annotation/web/img/XFF4834R.png"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    
    
    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetNcbiBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr27490.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetUniprotBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr27490.xml_fasta"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    • 
    

    
    
        
  • ERROR Tag PERLLIB Portal/Tools.pl GetKeggBlastButton\("/www/bacteria/annotation//site//www/bacteria/annotation//site/tmp/WBgo8gk0/XFF4834R_chr27490.xml_fasta", "blastp"\) - ERROR: No such file or directory at /www/bacteria/annotation/cgi/XFF4834R/../../lib/iANT/Entry/Display.pm line 164.

    •